KEGG   Leopardus geoffroyi (Geoffroy's cat): 123597501
Entry
123597501         CDS       T10761                                 
Symbol
SDC3
Name
(RefSeq) syndecan-3
  KO
K16337  syndecan 3
Organism
lgf  Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04514  Cell adhesion molecule (CAM) interaction
lgf04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:lgf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    123597501 (SDC3)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    123597501 (SDC3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:lgf00535]
    123597501 (SDC3)
Proteoglycans [BR:lgf00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   123597501 (SDC3)
SSDB
Motif
Pfam: Syndecan
Other DBs
NCBI-GeneID: 123597501
NCBI-ProteinID: XP_045332372
LinkDB
Position
C1:complement(23332014..23365527)
AA seq 442 aa
MKPGPPHRAGAAHGAGAGSGAAAGPGARGLLLPPLLLLLLAGRAAGAQRWRSENFERPVD
LEGSGDDDSFPDDELDDLYSGSGSGYFEQESGIETAMRFSPDVATAVSTTPAVPPTMDIQ
PVGTPFEELPSEHPTPEPATSPPVVTEVPEEPSQRATTVSMPTATTAATTAGALTVATVP
ATVATAAPSIPAAPPSTAITSVIRTTGAQRLLPLPLTTAATARATTPAAPSPPTTVAVLD
TEAPTPRLVSTATSRPRALPRPATTQEPDSPEKSTLPLGTTAPGPTEVAQTPTPESVLTT
IRDEPEVPVSGGPSGDFELPEEETTQPDTANEVVAVGGAAAKPSPPPGTLPKGAGPGPSL
LDNAIDPGSSAAQLPQKSILERKEVLVAVIVGGVVGALFAAFLVTLLIYRMKKKDEGSYT
LEEPKQASVTYQKPDKQEEFYA
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgaagccggggccgccgcaccgcgccggggccgcccacggggcaggcgccgggagcggg
gccgcggcagggcccggggcccgtgggctgctcctgccgccgctgctgctgctgctgctg
gccgggcgcgccgcgggggctcagcgctggcgcagtgagaacttcgagaggcccgtggac
ctggagggctctggggatgacgactccttccccgatgacgagctggacgacctctactcg
gggtccggctcgggctacttcgagcaggagtcgggcattgagacagccatgcggttcagc
ccagatgtggccacggcagtgtccaccacacccgcggtgccgcccaccatggacatccag
cccgtgggcaccccgtttgaagagctcccctccgagcaccccaccccggagccagccacc
agccccccggtggtgacagaggtcccggaagagcccagccagagagccaccaccgtctcc
atgcccacggctaccactgctgccacgaccgcaggggccctgaccgtggccacggtgccc
gccacggtggccaccgccgcccccagcatccccgcagcacccccttccacggccatcacc
tctgtcataaggaccaccggtgcacagaggcttctgcctcttccgctgaccacggcggcc
acggcccgggccaccaccccagcggcgccctcgcctcccaccacggtggctgtcttggac
acagaggccccgacacccaggttggtcagcacagctacctccaggccaagggcccttccc
aggccagctaccacccaggagcctgacagccctgagaagagcaccctgcccctggggacc
acggcccccggacccacggaagtggctcagaccccaactccggagtccgtcctgaccacg
atccgggatgagccagaggtgcccgtgagcggggggcccagcggggactttgagctgccg
gaggaagagaccacacagccagacacagccaatgaggtggtggctgtgggcggggctgcg
gccaagccgtcacctccacctgggacgctgcccaagggtgctggcccaggccccagcctc
ctggacaatgccatcgacccaggcagctcagctgctcagctgcctcagaagagcatccta
gagcggaaggaggtgctcgtagctgtgattgtaggcggggtggtgggcgccctgttcgcg
gccttcctggtcacgctgctcatctaccgcatgaagaagaaggatgagggcagctacaca
ctggaggagcccaagcaggccagcgtcacgtaccagaagcctgacaagcaggaggaattc
tacgcctag

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