Leopardus geoffroyi (Geoffroy's cat): 123597501
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Entry
123597501 CDS
T10761
Symbol
SDC3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
lgf
Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04514
Cell adhesion molecule (CAM) interaction
lgf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
123597501 (SDC3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
123597501 (SDC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lgf00535
]
123597501 (SDC3)
Proteoglycans [BR:
lgf00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
123597501 (SDC3)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
123597501
NCBI-ProteinID:
XP_045332372
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All DBs
Position
C1:complement(23332014..23365527)
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AA seq
442 aa
AA seq
DB search
MKPGPPHRAGAAHGAGAGSGAAAGPGARGLLLPPLLLLLLAGRAAGAQRWRSENFERPVD
LEGSGDDDSFPDDELDDLYSGSGSGYFEQESGIETAMRFSPDVATAVSTTPAVPPTMDIQ
PVGTPFEELPSEHPTPEPATSPPVVTEVPEEPSQRATTVSMPTATTAATTAGALTVATVP
ATVATAAPSIPAAPPSTAITSVIRTTGAQRLLPLPLTTAATARATTPAAPSPPTTVAVLD
TEAPTPRLVSTATSRPRALPRPATTQEPDSPEKSTLPLGTTAPGPTEVAQTPTPESVLTT
IRDEPEVPVSGGPSGDFELPEEETTQPDTANEVVAVGGAAAKPSPPPGTLPKGAGPGPSL
LDNAIDPGSSAAQLPQKSILERKEVLVAVIVGGVVGALFAAFLVTLLIYRMKKKDEGSYT
LEEPKQASVTYQKPDKQEEFYA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaagccggggccgccgcaccgcgccggggccgcccacggggcaggcgccgggagcggg
gccgcggcagggcccggggcccgtgggctgctcctgccgccgctgctgctgctgctgctg
gccgggcgcgccgcgggggctcagcgctggcgcagtgagaacttcgagaggcccgtggac
ctggagggctctggggatgacgactccttccccgatgacgagctggacgacctctactcg
gggtccggctcgggctacttcgagcaggagtcgggcattgagacagccatgcggttcagc
ccagatgtggccacggcagtgtccaccacacccgcggtgccgcccaccatggacatccag
cccgtgggcaccccgtttgaagagctcccctccgagcaccccaccccggagccagccacc
agccccccggtggtgacagaggtcccggaagagcccagccagagagccaccaccgtctcc
atgcccacggctaccactgctgccacgaccgcaggggccctgaccgtggccacggtgccc
gccacggtggccaccgccgcccccagcatccccgcagcacccccttccacggccatcacc
tctgtcataaggaccaccggtgcacagaggcttctgcctcttccgctgaccacggcggcc
acggcccgggccaccaccccagcggcgccctcgcctcccaccacggtggctgtcttggac
acagaggccccgacacccaggttggtcagcacagctacctccaggccaagggcccttccc
aggccagctaccacccaggagcctgacagccctgagaagagcaccctgcccctggggacc
acggcccccggacccacggaagtggctcagaccccaactccggagtccgtcctgaccacg
atccgggatgagccagaggtgcccgtgagcggggggcccagcggggactttgagctgccg
gaggaagagaccacacagccagacacagccaatgaggtggtggctgtgggcggggctgcg
gccaagccgtcacctccacctgggacgctgcccaagggtgctggcccaggccccagcctc
ctggacaatgccatcgacccaggcagctcagctgctcagctgcctcagaagagcatccta
gagcggaaggaggtgctcgtagctgtgattgtaggcggggtggtgggcgccctgttcgcg
gccttcctggtcacgctgctcatctaccgcatgaagaagaaggatgagggcagctacaca
ctggaggagcccaagcaggccagcgtcacgtaccagaagcctgacaagcaggaggaattc
tacgcctag
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