Leopardus geoffroyi (Geoffroy's cat): 123597894
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Entry
123597894 CDS
T10761
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A isoform X1
KO
K12849
pre-mRNA-splicing factor 38A
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123597894 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lgf03041
]
123597894 (PRPF38A)
Spliceosome [BR:
lgf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
123597894 (PRPF38A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
GIP4
Motif
Other DBs
NCBI-GeneID:
123597894
NCBI-ProteinID:
XP_045333369
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All DBs
Position
C1:42222134..42236800
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AA seq
316 aa
AA seq
DB search
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPR
VSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPR
RRSRSPKRRSHLHSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKS
PERSKKSHKKSRRGNE
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgtacggtgaaggatgcgcatagcatccacggcaccaatcctcagtatttg
gtggagaagatcattcggacgcgaatctacgagtctaagtactggaaagaggagtgcttt
ggactgacggctgaacttgtagtcgataaagccatggagttgaggtttgtgggtggtgtc
tatggtggcaacataaagccaactccctttctgtgtttgaccttgaagatgcttcaaatt
caacccgagaaggatatcattgtagagtttatcaaaaatgaagatttcaagtatgtccgc
atgttgggagcactttacatgaggctgacaggcactgcaattgattgctacaagtactta
gagcctctgtacaacgactatcgaaaaatcaagagccagaaccgaaatggggagtttgaa
ctgatgcatgtggatgagtttattgatgaactgctgcacagtgagagagtctgtgatatc
attctaccccggctacagaaacgctatgtgctagaggaagctgagcaactggagcctcgg
gttagcgctctagaagaggacatggatgatgtggagtccagtgaagaggaagaagaggaa
gatgagaagttggagagagtgccatcacctgatcatcgccggagaagctaccgagacttg
gacaagccccgtcgttctcccacactgcgctacaggaggagtagaagccggtctcccaga
aggcggagtaggtctcctaaaaggaggagtcatctccacagcccctcccctcgccgagaa
aggcatcggagcaaaagtccaagacgtcaccgcagcaggtctcgagatagaaggcacaga
tcccgctccaagtctccaggtcatcaccgtagtcacagacataggagccactcaaagtct
cctgaaagatctaagaaaagccacaagaagagccggagagggaatgagtaa
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