Leopardus geoffroyi (Geoffroy's cat): 123598216
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Entry
123598216 CDS
T10761
Symbol
HFM1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1 isoform X1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lgf03036
]
123598216 (HFM1)
Enzymes [BR:
lgf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
123598216 (HFM1)
Chromosome and associated proteins [BR:
lgf03036
]
Eukaryotic type
Meiosis-specific proteins
Others
123598216 (HFM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
ResIII
AAA_22
DEXQc_Suv3
Hfq
Ig_GP210_16th
Motif
Other DBs
NCBI-GeneID:
123598216
NCBI-ProteinID:
XP_045334201
LinkDB
All DBs
Position
C1:complement(77345569..77438080)
Genome browser
AA seq
1489 aa
AA seq
DB search
MLKSNDSLFALDTLSFERPDEAENYPDIEKSLDWFLPPAPLISEIPDTQALEEEIESHKL
LGQEKKPKMLPSNLKITNEDTNYISPTQKFQFAFSSKKYEEDYLNLGGAGNDDLSHVPGK
LTYGSSQKYKNHIGTEIAPEKNVPDDTKLINFAEDKGESTSAFRKRLFKISDNIHEDVYS
NDSTNLAFPVASVKIVPTEMNKGGSWKCSNNKQRHQYSDINMFTASDVFSHSEIREDIFK
APTFSVTSQPHEVQGVTENDLDSLKAVTEIPSKFRSIFKEFPYFNYIQSKAFDDLLYTDR
NFVICAPTGSGKTVMFELAITRLLMEVPLPWSNIKIVYMAPIKALCSQRFDDWKEKFGSI
GLNCKELTGDTVMDDLFEIQHAHIIMTTPEKWDSMTRKWRDNSLVQLVRLFLIDEVHVVK
DENRGPTLEVVVSRMKTVQSLSPASENSSTIIPMRFVAVSATIPNAEDIAEWLSNGERPA
VCLKVDEKHRPVKLRKVVLGFPCSSNQTEFKFDLTLNYKIANVIQTYSDQKPTLVFCATR
KGVQQAALVLVKDAKFIMAVEQKQRLQKCAYSLRDSKLRDILIYGVAYHHAGMEPSDRKV
VEGAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKSTMHYAGGMFEEYSETDILQMIGRAGR
PQFDTTATAVIMTRLSTKEKYIQMLACSDTVESSLHRHLIEHLNAEIVLHTITDVNIALE
WIRSTLLYIRALKNPSHYGFASGLNKDGIEAKLQELCLKNLNDLSSLDLIRMDEDVNFKP
TGNFSIKAGRLMAWYYITFETVKKFCTISGKETLLDLVTMIASCKEFVDVQLRINEKKTL
NTLNKDPHRVTIRFPMEGRIKTREMKVNCLIQAQLGCIPIQDFALTQDTSKIFRNGSRIT
RWLSDFVAVQEKKFAVLLNSLILAKCFRCKLWENSLHVSKQLEKIGITLSNAMVNAGLTS
FKKIEETDARELELILNRHPPFGTQIKETVMYLPKYELEVEQIARYNDTMAEILVTIILR
NFKQLQTKRTAPDSHYVTLIIGDADNQLVFKHRIMDSVLLRAGNWTKKIDVRRAFKSEDL
SINLISSEYVGLDIQQKFTVFYLGPKRFGNQIIMQKKSETEISHSKHSNRSTITGSNKGM
TACKKPGNRECNHHCKNKHTCGHDCCKTGVAQKSVMKESTISSYLSDLRNRNAVSSLPPV
KRLKMQMNKSQSVDLKEFGFTPKPSLSSISRSECLNIPELSIMEQRDQHEICAKVQQEPS
EYQDKDFSRWNSSTTSNEKAPQTVLFNRHLNASGNQNLTDADKSNSPLLEVTNVNFELGD
EVWDDFDDENLIEVTDLSAGTEKTNTSGFRNTLSSSIQGSKLSLQESKSKFQGEMSKSVV
SSHEKPDIYLSDSPVFKFDASSMTKLPPQAGNADIVCLQERKQQSLSPEIEKLCFTHSKK
IPNSSHFIEKVDFFISNNECKKEIDFSRYHPDDEAEEIKSFLGIFDGIF
NT seq
4470 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaatcaaatgactccttgtttgctttggatactttgtcttttgaaagaccagat
gaagctgagaactatccagacattgaaaaatcattggattggtttctcccacctgcgcca
ttgatatcggaaattccagatactcaggcattagaggaggaaatagaaagtcataaactg
ttaggtcaggaaaagaagccaaaaatgttaccatcaaatttaaagataactaatgaagac
acaaattatatttcaccaacacaaaaattccagtttgccttttcctcaaaaaaatatgaa
gaagattatctgaatttaggaggggcaggtaatgatgacttatcacatgttcctggcaag
ctgacgtatggttcttctcagaaatacaaaaatcacattggcactgagatagcacctgag
aaaaatgttccagatgatacaaaattaattaattttgcagaagataaaggagagagcaca
tcagccttccgaaaaagattatttaaaatatctgacaacatacatgaggatgtttattct
aatgacagtacaaacctggcctttcctgttgcttcagtgaaaattgtcccaacagaaatg
aacaaagggggatcatggaaatgtagcaataataagcagagacatcaatattcagacatt
aacatgtttacagcaagtgacgttttttctcattctgaaatcagagaagacatattcaaa
gcaccaactttttcagttacatcccagcctcatgaagttcaaggagtaacagaaaatgat
ttagattccttgaaggctgtcacagaaatcccgtcaaaatttagaagtattttcaaagaa
ttcccatattttaactatatacagtccaaagcctttgatgatcttctttacacagataga
aattttgtgatttgtgctccaactggttctgggaaaactgtaatgtttgaactagctata
acaagattgttaatggaagtaccattgccatggtcaaacattaaaattgtttatatggca
ccaataaaagccctgtgtagtcagcgttttgatgattggaaagaaaaatttggatcaata
ggattgaattgtaaagaactcactggagatacagtaatggatgacctatttgagattcag
catgcccatataataatgacaactccagaaaaatgggatagcatgactagaaaatggaga
gacaactctttggtccagctggttagactgttcctcattgatgaggtacatgttgtaaaa
gatgaaaatcgtggaccaactcttgaagttgtagtcagcagaatgaaaactgtacagtct
ttatctcctgcttcagaaaatagcagcacaattattccaatgagatttgtagctgtatct
gcaacaattccaaatgctgaggatattgcagaatggctttcaaatggtgaaagacctgct
gtatgtctgaaagtggatgagaaacatcggccggtgaaacttcggaaagtggtccttgga
tttccctgcagtagtaaccaaaccgaatttaagtttgatttaaccctcaactacaaaatt
gccaatgttatacaaacatactctgatcagaaacccacacttgtgttttgtgcaacaagg
aaaggtgtgcaacaggctgctttggttcttgtgaaagacgctaagtttattatggctgtg
gaacagaagcagaggttacagaaatgtgcatattccttaagagattcaaaactgagagat
atcttaatctatggtgttgcttatcatcatgctggtatggagccgtcagatagaaaagta
gttgaaggagctttcactgttggagatctaccagttctttttactaccagtactttagct
atgggagtaaatttgcctgctcacctagtagttataaaatctacaatgcattatgctgga
ggaatgtttgaagaatacagtgaaacagatattctacagatgattggtagagcgggtcga
cctcaatttgacactacagctactgcagttattatgactcggttaagtacaaaagagaag
tatattcagatgttagcttgtagtgacactgtagaaagcagtttacacagacatcttatt
gaacatttaaatgcagagatagtgctgcataccatcacagatgtgaatattgctttggaa
tggatacgatcaactttgctttatatcagagccttgaaaaatccatctcattatggtttt
gcatctggattgaacaaagatggaattgaagcaaaattacaagaattgtgtttgaagaat
ctgaatgatttatcatctctggacttgattaggatggatgaagatgttaatttcaaacca
actggtaatttttccatcaaggcaggaagattgatggcttggtattatattacatttgag
acagtgaagaaattttgtaccatcagtggaaaagagactttattagatctggtcacaatg
atagccagctgcaaggaatttgtagatgtgcagttaaggataaatgaaaagaaaacattg
aatacattgaacaaagatccacatcgggtaactatcagatttccaatggaaggaagaatt
aaaacaagagaaatgaaagtaaattgccttattcaggctcaactaggatgcattcccata
caagactttgctttgacccaagatacctcgaagattttcagaaatggctcacgaattaca
agatggttgtcagattttgtggctgttcaagaaaagaagtttgctgtactgttgaacagt
ttgattttagctaaatgttttagatgtaaactttgggaaaactctctgcatgtatcaaaa
cagctggaaaaaattggtataacattgtcaaatgcaatggtaaatgcaggtttgacctcc
tttaaaaaaatagaagaaacagatgcaagggagcttgagctgattttaaatagacaccct
ccttttggaacgcaaataaaagaaacagtgatgtatctaccaaaatatgaacttgaagtg
gaacagattgcaagatataatgataccatggcagaaatattagtgaccattatattaaga
aactttaaacagctacaaactaaaagaacagcgccagattctcactatgttaccttaatc
ataggtgatgcagataatcaactggttttcaagcacagaattatggattctgttttgcta
agagctggaaattggactaaaaagattgatgtgaggagagcttttaaatctgaagatctt
agcataaatctaattagttctgaatatgttggacttgatatacagcagaaatttacagtc
ttttacttaggacctaagaggtttggaaatcaaataattatgcaaaaaaaatcagaaaca
gagatttcccattctaaacattcaaatagatctactataacaggatccaataaaggaatg
actgcttgcaaaaaacctgggaaccgagaatgtaatcatcactgtaaaaataaacataca
tgtggacatgactgctgtaaaactggagttgcacaaaagtcagtaatgaaagagtcaaca
atctcttcatatttatctgatttaagaaataggaatgctgtttcatcacttcctccagtt
aaacgtctcaagatgcaaatgaataaatctcaaagtgtggatcttaaagaatttggtttt
actccaaaaccttctctttccagcatatcaaggtcagagtgtttaaatatacctgaattg
tctataatggaacagagggatcagcatgaaatctgtgcaaaagttcaacaagaaccatct
gaatatcaagacaaagatttttctagatggaactcttctacaacttcaaatgagaaagcc
cctcaaacagtactgttcaacagacatcttaatgcatctggaaaccagaatttgacagat
gcggataaaagtaattctccattgttagaagttacgaatgtgaactttgaattgggagat
gaagtttgggatgattttgatgatgagaacttgatagaagttactgatttgtcagccggt
actgagaagacaaatacatcaggatttagaaacactttgagttcaagtatccagggaagt
aagctatcccttcaagagtcaaagagcaaattccaaggagaaatgtcaaaaagtgttgtt
tcatcacatgagaagccagatatttatttatcagattctcctgtgttcaagtttgatgca
tcctccatgacaaaattgcctccacaagctggaaatgcagatattgtctgtttacaagaa
agaaaacagcagagtctgtcaccagagattgaaaagctgtgctttactcactctaaaaaa
ataccaaattcttcacattttattgagaaagtggatttctttattagcaacaatgaatgt
aaaaaggaaattgatttcagtaggtatcatcccgatgatgaagctgaggaaataaagtct
tttctgggaatatttgatggtattttctaa
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