Leopardus geoffroyi (Geoffroy's cat): 123598229
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Entry
123598229 CDS
T10761
Name
(RefSeq) protocadherin-8 isoform X1
KO
K16499
protocadherin delta 2
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lgf04515
]
123598229
Cell adhesion molecules [BR:
lgf04515
]
Cadherins
Protocadherins
123598229
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
123598229
NCBI-ProteinID:
XP_045334237
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All DBs
Position
A1:complement(29792685..29797424)
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AA seq
1071 aa
AA seq
DB search
MSPVRRGGSPCLFPLQLFSLCWVLSVAQSKTVRYSTFEEDAPGTVIGTLAEDLHMKVSGD
TSFRLMKQFNSSLLRVREGDGQLTVGDAGLDRERLCGQAPQCVLAFDVVSFSQEQFRLIH
VEVEVRDVNDHAPRFPRAQIPVEVSEGAAVGTRIPLEVPVDEDVGANGLQSVRLAEPHSP
FRVELQTRADGAQCADLVLLQELDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDAND
HSPAFPQGAVAEVELAEDAPVGSLLLDLDAADPDEGPNGDVVFAFGARTPPEARRLFRLD
PRSGRLTLAGPVDYERQDTYELDVRAQDRGPGPRASTCKVIVRIRDVNDNAPDITITPLA
APGAPAASPFAAAAAATAALGGADATSPTGPGTPEAGAISLVPEGAARESLVALVSTSDR
DSGANGQVRCALYGHEHFRLQPAYAGSYLVVTAASLDRERIAEYNLTLVAEDRGAPPLRT
VRPYTVRVSDENDNAPLFTRPVYEVSVRENNPPGAYLATVAARDPDLGRNGQVTYRLLEA
EVGRAGGSVSTYVSVDPATGAIYALRSFDYETLRQLDVRIQASDGGSPQLSSSALVQVRV
LDQNDHAPVLVHPAPANGTLEVAVPGRTARDTAVARVQARDADDGANGELAFELQQQEPR
EAFAIGRRTGEIVLTDDLSQEPPGRVFRALLVISDGGRPPLSTTATVSFVVTAGDGRGLV
APASAGSPERSRPPGSRLAASGPALQWDTPLIVIIVLAGSCTLLLAAIIAIATTCNRRKK
EVRKGGARREERPGAAGGGASAPGSPEEAARGAGPRPNMFDVLTFPGSGKAPFGSPAADP
PPPAVAAAEVPGSEGGSATGESSCHFEGQQRLRGAHAEPYGASPGFGKEPAPPVAVWKGH
SFNTISGREAEKFSGKDSGKGDSDFNDSDSDISGDALKKDLINHMQSGLWACTAECKILG
HSDRCWSPSCGGPNTHPPPHPPAQMSTFCKSTSLPRDPLRRDNYYQAQLPKTVGLQSVYE
KVLHRDYDRTVTLLSPPRPGRLPDLQEIGVPLYQSPPGRYLSPKKEANENV
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgagtccggtgaggcgcgggggcagcccctgccttttccctttacagctcttcagcctc
tgttgggtgctttcagtggcccagagcaagacagtgcgatacagcaccttcgaggaggac
gctcctggcacggtcatcgggaccctagctgaggacctgcatatgaaagtatccggagac
acaagcttccgcctgatgaagcagttcaacagctcgctgctccgagtgcgcgagggcgac
gggcagctgaccgtcggggacgcgggcctggaccgcgagcggctgtgcggccaggcacca
cagtgcgtgctggccttcgacgtggtcagcttctcccaggagcagttccggctgatacac
gtggaggtggaggtgagggacgtcaacgatcacgcgccgcgctttccccgggcccagatc
cccgtggaggtgtccgagggcgcggctgtgggcacgcgcatcccgctggaggtgccggtg
gacgaggacgtgggagccaacgggctgcagagcgtgcgcctggccgagcctcacagcccc
ttccgcgtggagctgcagacgcgcgcggacggcgcccagtgcgcggacctggtgctgctg
caggagctggaccgcgagagccaggccgcctacagcctggagctagtggcccaggacggc
ggccgcccgccgcgctccgccactgccgccctcagcgtgcgagtgctggacgccaacgac
cacagcccggccttcccgcagggcgccgtggccgaggtggagctggcggaggacgcgccc
gtgggctccctgctgctggacctggacgcagccgaccccgacgagggccccaacggcgac
gtggtgtttgccttcggtgcccgcactccgcccgaggcgcgccgcctcttccgcctggac
ccgcgctcgggccgcctcaccctggcaggacccgtggactacgagcgccaggacacctat
gagctagacgtgcgggcccaggaccgcggtcccgggcctcgggcctccacctgcaaagtc
atcgtgcgcatccgcgacgtcaatgacaacgctccggacatcaccatcaccccgctggcc
gccccgggcgcgcctgccgcctctcccttcgccgccgccgccgccgccaccgccgctctc
gggggcgcggacgcgacctcgccgaccggacctggaacgcctgaggccggcgccatctcg
ctggtgccagagggggcggcgcgcgagagcctggtggcgctggtcagcacctcggacaga
gattcgggcgccaatgggcaggtgcgctgcgccctctacgggcacgagcatttccggctg
cagccggcctacgcgggcagctacctggtggtgaccgcggcgtccctggaccgcgagcgc
atcgctgagtacaacctgacgctggtggccgaggacagaggcgcgccccctctacgcacc
gtgcggccctacacggtgcgcgtgagcgacgagaatgacaacgcgccacttttcacacga
ccagtctatgaggtgtccgtacgtgagaacaacccgcccggggcctacttggccacggta
gccgcccgggatccggacctgggccgcaacggccaggtcacctaccggctgctggaggcc
gaagtaggccgtgccgggggctcagtgtccacctatgtgtcggtggacccggctaccggg
gccatctacgcgctgcgaagcttcgactatgagaccctacgccagctcgacgtgcgcatc
caggcgagcgacggtggctcccctcagctctccagcagtgccctggtgcaagtgagagta
ctggaccagaacgaccacgcacccgtcctggtgcacccggcgccggccaacgggaccctg
gaagtggcggtccccgggcgcacggcaagggacacggcggtggcgcgtgtgcaggcccgg
gacgcagacgatggtgccaacggggagctggcattcgagctgcagcagcaggagccgcga
gaagccttcgccatcggccgccgcacgggggagatagtgctcacagacgacctctcgcag
gagccccccggccgtgtcttccgggctctgttggtcatatccgacggtggccgtcccccg
ctctccaccactgccactgtcagcttcgtggtgacagcaggtgacggacgcgggctggtg
gcgcccgccagtgcagggagcccggagcgctctcgcccgcctggctcgcggctcgcggcg
tcggggccggcgctacaatgggacacgccgctaatcgtcatcatcgtgttggcgggaagc
tgcacgctgctgctggccgccatcatcgccatcgccaccacctgcaaccgccgcaagaag
gaggtgcgcaaagggggggcccgccgggaagagcggcccggggcggcgggcggcggagcc
tcggctcccggctccccggaggaggctgcccggggagccgggcccaggcccaacatgttc
gacgtgctcaccttccctggcagcggcaaagcgccctttggcagccccgcggccgacccg
cccccgcccgcggtcgctgcggccgaagtgccgggctcggagggcggcagcgccaccggg
gaaagctcctgtcacttcgaggggcagcagcggctccgcggcgcgcacgccgagccctac
ggtgcctctcccggcttcggaaaggagccggcgccccctgtggcggtctggaaaggacac
tctttcaataccatctccggccgagaagctgagaagttcagcggcaaagacagcggcaaa
ggggacagtgatttcaacgacagcgattccgacatcagcggggacgctctgaaaaaggat
ctcatcaaccacatgcagagtggactgtgggcgtgcaccgctgagtgtaagatcctgggc
cactctgaccgctgctggagcccgtcatgcggagggcccaacacacatcccccgcctcac
ccaccggcccagatgtctaccttctgtaagagcacgtccctgcctcgtgatcctctgcgc
agggacaattactaccaggcccagctgcccaagacagtggggctgcagagcgtctatgag
aaagtgctacacagggactatgacaggacagtcactctgctctcccctccccgcccaggg
aggctcccagacttgcaggagattggggtacccctctatcagtccccccctggcaggtac
ctgtccccaaagaaggaagccaatgaaaatgtgtaa
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