Leopardus geoffroyi (Geoffroy's cat): 123598711
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Entry
123598711 CDS
T10761
Symbol
RORC
Name
(RefSeq) nuclear receptor ROR-gamma isoform X1
KO
K08534
RAR-related orphan receptor gamma
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04659
Th17 cell differentiation
lgf04710
Circadian rhythm
lgf05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
123598711 (RORC)
09159 Environmental adaptation
04710 Circadian rhythm
123598711 (RORC)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
123598711 (RORC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lgf03000
]
123598711 (RORC)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lgf03310
]
123598711 (RORC)
Transcription factors [BR:
lgf03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
123598711 (RORC)
Nuclear receptors [BR:
lgf03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
123598711 (RORC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
123598711
NCBI-ProteinID:
XP_045335200
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All DBs
Position
C1:complement(106479188..106502093)
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AA seq
518 aa
AA seq
DB search
MDRAPQRQHRASQELLATKKTHSSQIEVIPCKICGDRSSGIHYGVITCEGCKGFFRRSQQ
CNVVYSCTRQQNCPIDRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQK
QLQRQQQQQRGQVAKTPPVGGQGADALACPVGLPDGQLPLGSSPDLPEASACPPGLLRAP
GSGPSCPSSLAKAGPNGASYHLGHSPERGKAEARDGFYGTGSQLPPDTCGLHFEDPRHPG
LEEPGQGPDSYCSPSFHSTPEVPYASLTETEHLVQNVCKSYRETCQLRLEDLLRQRPNIF
SREEVAGYQRKSMWEMWERCAHRLTEAIQYVVEFAKRLSGFMELCQNDQIVLLKAGAMEV
VLVRMCRAYNADNHTVFFEGKYGGTELFRALGCGELISSIFDFSHSLSTLRFSEDEIALY
TALVLINANRPGLQEKRKVEQLQHNLELAFHHHLYKTHRQGILAKLPPKGKLRSLCSQHV
EKLQTFQHLHPIVVQAAFPPLYKELFSTEIESPEGLSE
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggacagggccccacagagacagcaccgagcctctcaggagctgctggccacaaagaag
acccacagctcacaaattgaagtgattccttgcaaaatctgtggggacaggtcgtctggg
atccactacggggttatcacctgtgaggggtgcaagggtttcttccgccggagccagcag
tgtaacgtggtctactcctgcacccgccagcagaactgccccatcgaccgtaccagccga
aaccggtgccagcactgccggctgcagaaatgcctggcactgggcatgtcccgagatgct
gtcaagtttggccgcatgtccaagaagcagagggacagcctgcacgccgaggtgcagaaa
caactacagcggcagcaacagcagcagcggggacaagtggccaagaccccgccagtgggg
ggccagggagcagatgccctcgcatgccctgtgggactcccagatgggcagctgcccctg
ggctcttcgcctgacctgcccgaggcctcggcctgcccccccggcctcctgagagcccca
ggctctgggccctcctgccccagcagcctggccaaggcggggcccaacggggcctcatac
cacctgggacacagccccgagcggggcaaggccgaggccagagacggcttctatggcaca
ggcagccagctgccccctgacacatgtgggcttcatttcgaggaccccaggcatcctggg
cttgaggaaccaggacagggcccggacagctactgcagccccagcttccacagcacccca
gaggtgccctatgcctccctgacagagactgagcacctggtgcagaacgtttgtaagtcc
taccgagagacatgtcagctgcgactggaggacctgctacgacagcgccctaacatcttc
tcccgggaggaggtggctggctaccagaggaagtcaatgtgggagatgtgggaacgctgt
gcccaccgcctcactgaggccattcagtacgtggtggagttcgctaagaggctctcaggc
tttatggagctctgccagaatgaccagattgtgcttctcaaagcaggagcaatggaagtg
gtcctggtcaggatgtgccgggcctacaacgctgacaaccacacagtctttttcgaaggc
aaatacggaggcacggagctgttccgagccttgggctgtggggagctcatcagctccatc
tttgacttctcccactccctgagcacattgcgcttttctgaggatgagattgctctctac
acagccctcgtgctcatcaacgccaaccggccagggctccaagagaagaggaaagtagag
cagctgcagcacaacctggagctggctttccatcaccatctctacaagacccaccgccaa
ggtatcctggccaagctgccacccaaggggaagcttcggagcctgtgtagccagcacgtg
gaaaagctgcaaaccttccagcatctgcaccccatcgtggtccaggctgctttccctcca
ctctacaaggaactcttcagcactgaaattgagtcacctgaggggctgtccgagtga
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