Leopardus geoffroyi (Geoffroy's cat): 123599296
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Entry
123599296 CDS
T10761
Symbol
SOX21
Name
(RefSeq) transcription factor SOX-21
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lgf03000
]
123599296 (SOX21)
Transcription factors [BR:
lgf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
123599296 (SOX21)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
123599296
NCBI-ProteinID:
XP_045336636
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Position
A1:complement(66721214..66725245)
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AA seq
276 aa
AA seq
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MSKPVDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLLKKDKFAFPVPYGLGGVADAEHPALKAGAGLHAG
AGGGLVPESLLANPEKAAAAAAAAAARVFFPQSAAAAAAAAAAAAAGSPYSLLDLGSKMA
EISSSSSGLPYASSLGYPTAGAGAFHGAAAAAAAAAAAAGGHTHSHPSPGNPGYMIPCNC
SAWPSPGLQPPLAYILLPGMGKPQLDPYPAAYAAAL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccggtggaccacgtcaagcggcccatgaacgccttcatggtgtggtcgcgg
gctcagcggcgcaagatggcccaggaaaaccccaagatgcacaactcggagatcagcaag
cggctgggcgccgagtggaagctgctcaccgagtcggagaagcggccgttcatcgacgag
gcgaagcgcctgcgcgccatgcacatgaaggagcaccctgactacaagtaccggccgagg
cgcaagcccaagacgctgctcaagaaggacaagttcgccttcccggtgccctacggcctg
ggcggcgtggccgacgccgagcacccggcgctcaaggcgggcgccgggctgcacgcgggc
gcgggcggcggcctggtgcctgaatcgctgctcgccaatcccgagaaggcggccgccgcc
gctgcagccgccgccgcgcgcgtctttttcccgcagtcggccgccgctgccgccgccgcc
gccgccgccgccgccgccggcagcccctactcgctactcgacttgggctccaagatggca
gagatctcgtcgtcgtcgtccggcctcccgtacgcgtcgtcgctgggctacccgaccgcg
ggcgccggcgccttccatggcgcggcggcggcggctgcagcggcggccgcggccgccggg
gggcacacgcactcgcaccccagcccgggcaacccgggctacatgatcccgtgcaactgc
agcgcgtggcccagccccgggctgcagccgccgctcgcctacatcctgctgccgggcatg
ggcaagcctcagctggacccctaccccgcggcctacgccgccgcgctatga
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