Leopardus geoffroyi (Geoffroy's cat): 123599427
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Entry
123599427 CDS
T10761
Symbol
FN1
Name
(RefSeq) fibronectin isoform X1
KO
K05717
fibronectin 1
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04151
PI3K-Akt signaling pathway
lgf04510
Focal adhesion
lgf04512
ECM-receptor interaction
lgf04810
Regulation of actin cytoskeleton
lgf04820
Cytoskeleton in muscle cells
lgf04933
AGE-RAGE signaling pathway in diabetic complications
lgf05100
Bacterial invasion of epithelial cells
lgf05135
Yersinia infection
lgf05146
Amoebiasis
lgf05165
Human papillomavirus infection
lgf05200
Pathways in cancer
lgf05205
Proteoglycans in cancer
lgf05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
123599427 (FN1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123599427 (FN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
123599427 (FN1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
123599427 (FN1)
04810 Regulation of actin cytoskeleton
123599427 (FN1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
123599427 (FN1)
05205 Proteoglycans in cancer
123599427 (FN1)
09162 Cancer: specific types
05222 Small cell lung cancer
123599427 (FN1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
123599427 (FN1)
09171 Infectious disease: bacterial
05135 Yersinia infection
123599427 (FN1)
05100 Bacterial invasion of epithelial cells
123599427 (FN1)
09174 Infectious disease: parasitic
05146 Amoebiasis
123599427 (FN1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
123599427 (FN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lgf04131
]
123599427 (FN1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lgf04147
]
123599427 (FN1)
00536 Glycosaminoglycan binding proteins [BR:
lgf00536
]
123599427 (FN1)
04990 Domain-containing proteins not elsewhere classified [BR:
lgf04990
]
123599427 (FN1)
Membrane trafficking [BR:
lgf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
123599427 (FN1)
Exosome [BR:
lgf04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
123599427 (FN1)
Glycosaminoglycan binding proteins [BR:
lgf00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
123599427 (FN1)
Domain-containing proteins not elsewhere classified [BR:
lgf04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
123599427 (FN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
fn1
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
fn2
Fn3_Dep-1_2nd
NDNF
FN3_Tor_3rd
Motif
Other DBs
NCBI-GeneID:
123599427
NCBI-ProteinID:
XP_045337100
LinkDB
All DBs
Position
C1:complement(200272238..200342661)
Genome browser
AA seq
2450 aa
AA seq
DB search
MLRGPGPRLLLLAVLSLGTAVPSTGASKSKRQAQQIIQPQTPVAVSQSKPGCYDNGKHYQ
INQQWERTYLGNALVCTCYGGSRGFNCESKPEPEETCFDKYTGNTYRVGDTYERPKDSMI
WDCTCIGAGRGRISCTIANRCHEGGQSYKIGDTWRRPHETGGYMLECVCLGNGKGEWTCK
PIAEKCFDHAAGTSYVVGETWEKPYQGWMMVDCTCLGEGSGRITCTSRNRCNDQDTRTSY
RIGDTWSKKDNRGNLLQCICTGNGRGEWKCERHAALQTTSAGSGSFTDVRTAIYQPQPHP
QPAPYGHCVTDSGVVYSVGMQWLKTQGNKQMLCTCLGNGVSCQETAVTQTYGGNSNGEPC
VLPFTYNGRTFYSCTTEGRQDGHLWCSTTSNYEQDQKYSFCTDHTVLVQTRGGNSNGALC
HFPFLYNNHNYTDCTSEGRRDNMKWCGTTENYDADQKFGFCPMAAHEEICTTNEGVMYRI
GDQWDKQHDMGHMMRCTCVGNGRGEWTCVAYSQLRDQCIVDDITYNVNDTFHKRHEEGHM
LNCTCFGQGRGRWKCDPVDQCQDSETRTFYQIGDSWEKYVHGVRYQCYCYGRGIGEWHCQ
PLQTYPGTTGPVQVIITETPSQPNSHPIQWNAPEPSHISKYILRWKPKSSPRGWKEATIP
GHLNSYTIKGLTPGVVYEGQLISVQHYGHREVTRFDFTTTSTSTAVTSNTVTGETTPLSP
VVATSESVTEITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVSIPDL
LPGRKYIVNVYQISEEGEQSLILSTSQTTAPDAPPDPAVDRVDDTSIVVRWSRPQAPITG
YRIVYSPSVEGSSTELNLPETANSVTLSDLQPGVQYNITIYAVEENQESTPVFIQQETTG
VPRSDKVPPPKDLQFVEVTDVKITIMWTPPESPVTGYRVDVIPVNLPGEHGQRLPISRNT
FAEVTGLSPGVTYHFKVFAVNQGRESKPLTAEQTTKLDAPTNLRFTNETDSTVIVTWTPP
RARIAGYRLTVALTRGGQPKQYNIGPSASQYPLRNLQPASEYTATLMAVKGNQQSPKATG
VFTTRQPLGSVPPYNTEVTETTIVITWTPAPRIGFKLGVRPSQGGEAPREVTSESGSIVV
SGLTPGVEYIYTISVLRDGQERDTPIVKKVVTPLSPPTNLHLETNPDTGVLTVSWERSTT
PDITGYRITTTPTNGQQGYSLEEVVHADQSSCTFENLSPGLEYNVSVYTVKDDKESAPIS
DTIIPEVPQLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFEDFVDSSV
GYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVPPPTDLRFTNIGPDTMRVTWAP
PPSIELTNLLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYLVSVSSVYEQHESTP
LRGRQKTGLDSPTGIDFSDITAHSFTVHWIAPRATITGYRIRHHPEHTGGRPREDRVPPS
RNSITLTNLIPGTEYVVSIVALNGREESPPLIGQQSTVSDVPRDLEVIAATPTSLLISWD
APAVTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGADYTITVYAVTGRGDSPA
SSKPISIDYRTEIDKPAQMQVTDVQENSISVRWLPSSSPVTGYRVTTTPKNGPGPSKTKT
AGPDQTEMTIEGLQPTVEYVVSVYAQNRNGESQPLVQTAVTNIDRPKGLAFTDVDVDSIK
IAWESPQGQVSRYRVTYSNPEDGIHELFPAPDGEEDTAELQGLRPGSEYTVSVVALHDDM
ESQPLIGTQSTAIPAPTDLKFTQVTPTSLTAQWTAPNVQLTGYRVRVTPKEKTGPMKEIN
LAPDSSSVVVSGLMVATKYEVSVYALKDSLTSRPVQGVVTTLENVSPPRRARVTDATETT
ITISWRTKTETITGFQVDAIPANGQTPIQRTIKPDVRSYTITGLQPGMDYKIYLYTLNDN
ARSSPVVIDASTAIDAPSNLRFLATTPNSLLVSWQPPRARITGYIIKYEKPGSPPREVVP
RPRPGVTEATITGLEPGTEYTIQVIALKNNQKSEPLIGRKKTVQKTPFINPGYDTGNGIQ
LPGTSGQQPSVGQQMIFEEHGFRRTTPPTTATPVRHRPRPYPPNVNEEIQVGHVPRGDVD
HHLYPHVLGLNPNASTGQEALSQTTISWTPFQESSEYIISCHPVGIDEEPLQFRVPGTSA
SATLTGLTRGATYNIIVEALKDHKRHKVREEVVTVGNSVDQGLNQPTGDSCFDPYTVSHH
AVGEEWERLSESGFKLSCQCLGFGSGHFRCDSSKWCHDNGVNYKIGEKWDRQGENGQMMS
CTCLGNGKGEFKCDPHEATCYDDGKTYHVGEQWQKEYLGAICSCTCFGGQRGWRCDNCRR
PGAEPGHEGSTGHYNQYSQRYHQRTNTNVNCPIECFMPLDVQADREDSRE
NT seq
7353 nt
NT seq
+upstream
nt +downstream
nt
atgctcaggggtccggggccccggctgctgttgctggccgtcctgtccctggggacagcg
gtgccctccaccggagcctcgaagagcaagaggcaggctcagcaaatcattcagccccag
accccagtggctgtcagccagagcaagcctggctgttatgacaatgggaaacactatcag
ataaaccaacaatgggagcgcacctacctgggaaatgccttggtttgtacctgttatgga
gggagccgaggatttaactgcgagagtaaacctgaacctgaagagacttgctttgacaag
tacactgggaacacttaccgagtgggtgacacttatgagcgccctaaagactccatgatc
tgggactgcacctgcattggagctgggcgagggaggataagttgtacaattgcaaaccgt
tgccatgaaggcggtcagtcctacaagatcggtgacacgtggaggagaccacatgagacc
ggcggttacatgttggagtgtgtgtgtcttggtaatgggaaaggagaatggacctgcaag
ccgatagctgagaaatgttttgatcatgctgctggaacttcctacgttgttggagaaact
tgggaaaagccatatcaaggctggatgatggtggattgtacctgtctgggagaaggcagt
ggacgtatcacctgtacttctagaaacagatgcaatgaccaggacaccaggacatcctac
cgaattggagacacgtggagcaagaaggataatcgggggaacctgctccagtgcatctgc
acgggcaacggcaggggggagtggaagtgtgagaggcatgcggctctgcagaccacgtcc
gctggatctggctctttcacagatgtccgaaccgccatttaccagccccagcctcacccc
cagcctgctccatacggtcactgtgtcacagacagtggtgtggtttactctgtggggatg
cagtggctgaagacacaaggaaataagcaaatgctgtgcacttgcctgggcaatggtgtc
agctgccaagagacagctgtaacccaaacctacggtggcaattcaaacggggagccgtgt
gtcttaccattcacctacaatggcaggactttctactcctgcaccacagaagggcgacag
gatggacatctctggtgcagcacaacttccaattatgagcaagaccagaaatattccttc
tgtacagaccatactgttttggttcagactcgaggtggaaattccaatggtgccttgtgc
cacttccccttcctgtacaacaaccacaactacacggactgtacttctgagggcaggaga
gacaacatgaagtggtgtggaacaacggagaactacgatgctgaccagaagtttggattc
tgccccatggccgcccacgaggaaatctgcacaaccaatgaaggggtcatgtatcgcatt
ggagatcagtgggacaaacagcatgatatgggccacatgatgaggtgcacatgtgttggg
aatggtcgtggagaatggacttgtgtcgcctactctcagctccgagatcagtgtattgtt
gacgacatcacttacaacgtgaatgacacattccacaagcgtcatgaagaggggcacatg
ctgaattgtacctgctttggtcagggccggggcagatggaaatgcgatcccgttgaccaa
tgccaggattcagaaacccgaacattttatcaaattggagactcctgggagaagtacgtg
catggtgtcaggtaccagtgctactgctatggccgtggcattggggagtggcattgccaa
cctttgcagacctatccaggcacaactggtcctgtccaagtcatcatcactgagaccccc
agtcagcccaattctcaccccatccagtggaatgcaccagagccatctcacatttccaag
tacattctcagatggaaacctaaaagttccccacgcggttggaaggaagccaccattcct
ggccacttgaattcctacaccatcaaaggcctgaccccaggtgtggtatatgagggacag
ctcatcagtgttcagcactacggccacagagaggtgacacgctttgacttcaccaccacc
agcacgagcacagcagtgactagcaacactgtgacaggagagacgacacccctttctccc
gttgtggccacttctgaatctgtgaccgaaatcacggccagcagctttgtggtctcatgg
gtctcggcatcagacaccgtgtcaggattccgtgtggaatacgagctaagtgaggaggga
gatgaaccacagtaccttgatcttccaagcacggccacttctgtgagcatccctgacctg
cttcctggacgaaaatacattgtaaatgtctatcagatatctgaagaaggagagcagagt
ctgatcctgtctacttcacagacaacagcgcccgatgcgcctcctgaccctgccgtggac
cgagtcgatgacacgtcgattgtcgttcgctggagcagaccccaggcacccatcacagga
tacagaatagtgtactcgccatcagtagaaggtagtagcacagaacttaaccttcctgaa
accgccaactccgtcaccctcagtgacttgcaacctggagttcagtataacatcacgatc
tacgctgtggaagaaaatcaagaaagtactcctgttttcatccagcaagaaaccactggt
gtcccgcgttcagataaagttccccctcccaaggacctgcagtttgtggaagtgactgac
gtcaagatcaccatcatgtggacaccccctgagagccccgtgacgggttaccgcgtggac
gtgatccccgtcaacttgcctggggagcacggacagaggctgcccattagcaggaacacc
tttgcggaggtcaccggcttgtcccccggggtcacctatcacttcaaagtcttcgctgtg
aaccaagggagggagagcaagcctctgacggcagaacagacgaccaaattggatgctccc
actaacctccgatttaccaacgaaactgactccactgtcatagtgacctggactccacct
cgggcccgcatagccgggtaccgactgaccgtggccctgacccggggaggccagcccaag
cagtacaacatagggccctctgcctcccagtacccgctgaggaatctgcagcctgcctct
gagtatactgcaaccctcatggctgtcaaaggcaaccaacagagccccaaagccactggc
gtctttaccacccggcagcctctcggctctgttccaccttacaacacagaggtcactgag
accaccattgtgatcacatggacacctgctccaaggattggttttaagctgggtgtacga
ccaagccagggaggggaagcaccgcgagaagtgacttcagagtcaggaagcatcgtcgtg
tctggcctgactccaggcgtggaatacatttacaccatctcggtcctgagagatgggcag
gagagagatacaccgattgtaaagaaagttgtgacaccattgtctccacccacaaacctg
cacctggagacaaaccccgacaccggtgtgcttacagtgtcctgggagaggagcaccact
ccagacattactggttatagaattaccaccacccctacaaatggccaacagggatattct
ttggaagaagtggtccatgcagatcagagttcctgcacttttgaaaacctgagtcctggc
ttggagtacaatgtcagtgtttacactgtcaaagatgacaaggaaagtgcccctatctct
gataccatcatcccagaggtgccccaactcactgacctaagctttgttgatataaccgat
tcaagcatcggcctgaggtggaccccgctaaactcttccaccattattgggtaccgcatc
acagtagttgcggcaggagaaggtatccctatttttgaagattttgtggactcctcagta
ggatactacacagtgacagggctggagccgggcattgactatgacatcagcgttatcact
ctcattaatggcggagagagtgcccctactacactgacacagcaaacggctgtgcctcct
cccactgacctgcgattcaccaatatcggtccagacactatgcgtgtcacctgggcccca
cctccgtccattgaattgaccaacctcctggtgcgctactcccctgtcaagaatgaggaa
gatgttgcggagttgtccatctctccttcagacaacgcagtggtcttaacaaatctcctg
cctggcaccgaatatttggtcagtgtctccagtgtttacgaacaacacgagagcacacct
cttagaggaagacagaaaacaggtctcgattccccaactggcatagacttttctgatatc
actgcccactctttcaccgtccattggattgctcctcgagccaccatcactggctaccgg
attcgccatcaccctgaacacactggtggaagacctcgggaagatcgggtgcccccgtct
cggaattccatcaccctcaccaatctcattccgggcacagaatatgtggtcagcatcgtt
gctcttaatggcagagaggaaagtcctcccttgattggccaacagtcaacagtttctgat
gttccgagggacctggaagtcatcgccgccacccccaccagcctcctgatcagctgggat
gctcccgctgtcacagtgagatattacaggatcacctatggagaaacaggaggaaatagc
cctgtccaggagttcaccgtgcctgggagcaagtccacagctaccatcagtggcctgaaa
cctggagcggactacaccatcaccgtgtatgctgtcactggccgtggagacagcccagca
agcagcaagccaatttccattgattatcgaacagaaattgacaagccagcacagatgcaa
gtgactgacgttcaggaaaacagcattagtgtcagatggctgccttcaagttcccctgtt
actggctacagagtgaccactactcctaaaaatggcccaggaccatcaaaaactaaaact
gcgggtccagatcaaacagaaatgaccattgaaggcttgcagcccacagtggagtatgtg
gtcagtgtctacgctcagaatcgaaacggagagagtcagcctctggttcaaactgcagta
accaacattgatcgccctaaaggactggcattcactgatgtggatgtcgattccatcaaa
attgcttgggaaagcccacaggggcaagtttccaggtacagggtgacctactcgaaccct
gaggatggaatccatgagctattccctgcacctgatggtgaagaagacacagcagagctg
caaggcctcaggccgggttctgagtacacagtcagtgtggttgccttgcacgatgatatg
gagagccagcccctgattggaacccagtccacagccattcctgcaccaaccgacctgaag
ttcacccaggttacaccaacaagcctgaccgcccagtggacagcgcccaatgttcagctc
actggatatcgagtgcgggtgacccccaaggaaaagactggaccaatgaaagaaatcaac
cttgctcctgacagctcatctgtggttgtatcaggactcatggtggccaccaaatatgaa
gtgagcgtctatgcccttaaggacagtttgacaagcagaccagttcagggagtcgtcact
actctggagaatgtcagccctccaagaagggcccgtgtgactgatgctacggagaccacc
atcaccatcagctggagaaccaagactgagacaatcactggcttccaagttgatgccatc
ccagcaaacggccagactccaattcagagaaccattaagccagatgtcagaagctacacc
atcacaggtttacaacccggcatggactacaagatctatttatacaccctgaatgacaat
gctcggagctctcctgtggtcatcgatgcctccactgccattgatgcaccatccaatctg
cgtttcctggccaccacacccaactccttgctggtatcatggcagccaccccgtgccagg
attactggttacatcatcaagtatgagaaacctgggtcccctcccagagaagtggtccct
cgtcctcgccctggtgtcacagaggctactattactggtctggaaccagggaccgagtat
accatccaagtcattgcccttaagaacaaccagaagagtgagcctctgattggaaggaaa
aagacagttcaaaagacccctttcatcaaccctgggtatgacactggaaacggtattcag
cttcctggcacttctggtcagcagcccagtgttgggcaacaaatgatctttgaggagcat
ggttttaggcgcaccacaccgcccacaacggccacccctgtaaggcataggccaagacca
tatccgccgaatgtaaatgaggagatccaagttggtcatgtccccaggggagacgtagac
catcacctctaccctcacgttctgggactcaatccaaatgcctctacaggacaagaagct
ctctctcagacaaccatctcttggaccccattccaagaaagctctgagtatatcatttca
tgtcatcccgttggcattgacgaagaacctttacagttccgagttcctggaacttcggcc
agtgccaccctgacaggcctcaccagaggggccacctacaacatcatagtggaggcactg
aaagaccacaagaggcacaaggttcgggaggaggtcgttaccgtgggcaactctgtcgac
caaggcctaaaccaacctacaggtgactcgtgcttcgacccctacacggtttcccatcat
gccgtcggagaggagtgggagcggctgtctgaatctggctttaagctctcgtgccagtgc
ttgggctttggcagtgggcatttcagatgtgactcatctaaatggtgccatgacaatggc
gtgaactacaagattggagagaagtgggatcgtcagggggagaatggccagatgatgagc
tgcacctgtcttggaaatggaaaaggagaattcaagtgtgatcctcatgaggcaacgtgc
tatgatgatgggaagacataccatgtaggagaacagtggcagaaggaatatcttggtgcc
atttgctcctgcacatgcttcggaggccagcggggctggcgctgtgacaactgccgaaga
ccaggggctgaacccggtcacgaaggctccaccggccactacaaccagtactcgcagaga
taccaccagagaacgaacactaatgtcaactgcccaattgaatgcttcatgcctttagat
gtacaggctgacagagaagattcccgagagtga
DBGET
integrated database retrieval system
