Leopardus geoffroyi (Geoffroy's cat): 123599430
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Entry
123599430 CDS
T10761
Symbol
XRCC5
Name
(RefSeq) X-ray repair cross-complementing protein 5 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
123599430 (XRCC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgf03400
]
123599430 (XRCC5)
DNA repair and recombination proteins [BR:
lgf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
123599430 (XRCC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_PK_bind
Ku_C
Motif
Other DBs
NCBI-GeneID:
123599430
NCBI-ProteinID:
XP_045337118
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Position
C1:200924091..201057241
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AA seq
733 aa
AA seq
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MARSRSKAAIVLCMDVGSAMSNSLPGEESPFELAKKLMTMFVQRQVFAESKDEIALVLFG
TDGTENALAGKDQYQNITVHRHLMLPDFDLLEDIESKIQPGSQQADFLDALVVCMDVIQQ
ETVGKKFGKRHIEVFTDLSSPFSQDQLDIIIHNLEKSGISLQFFLPFPVGKEDGTGDRGD
GNSCLDQHGPSFPLKGITEQQKEGIRMVKKVMMSLEGEDGLDEIYSFSESLRQLCVFKKT
ERYSVPWLCTLTIGSNLAIKIVAYKAIMQEKVKKSWTVVDARTLKKEDIQKETVYCLQDD
DETEVPKEDTIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFCRSSQVHRRYFVGNQ
VLKVFAAKDDEAAAVALSSLIHALDELDMVAVVRYAYAGRTNPQVGMAFPYIKDAYECLM
YVQLPFMEDLRQYMFSSLKNSKKCTPTEAQLSAVDALIDSMSLVKKDEKEDTIEDLFPTT
KIPNPQHQRLYQCLAHRALHPQEPLPPIQQHILNMLDPPAEVTAKCQIPLSKIKTVFPLT
EATKKKDQVPAQNIFPDNHEEGPASKKLKTQEGEACFSVSSLAEGSVTRVGSVNPAENFR
VLVRQKKASFEEASRQLINQIEQFLDTNETPYFMKSMDCITVFREEAIQVSEEQCFNNFL
KALREKVEIKQLKHFWDIVVQDGITLITKDEAPGSSITAEEAKKFLAPRENPNEDAAAIF
AEGGDVDDLLDLI
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggtccaggagtaaggcagctattgtgctctgtatggatgtggggtctgccatg
agtaactcccttcctggcgaagaatctccatttgaactagcgaagaagttgatgaccatg
tttgtgcagcgacaggtgtttgctgagagcaaggatgaaattgcattagtcctttttggt
acagatggtactgagaatgcccttgctggtaaggatcagtatcagaacatcacagtccac
agacacctgatgctaccagattttgacctgctggaggacatcgaaagcaaaatccaacca
ggctctcaacaagctgacttcctggatgcactcgttgtgtgcatggatgtgattcaacaa
gaaactgtcggaaagaagtttggaaagaggcatattgaagtgttcactgacctcagcagc
ccattcagccaagatcagctggatattataatccataacttggagaaatctggcatctcc
ctgcagttctttttgccattccctgttggcaaggaggatggaactggggacagaggagat
ggtaactcctgcttggaccagcatggaccctcctttcctctaaaaggaattactgagcag
cagaaagaaggtattcggatggtgaaaaaggtgatgatgtctttagaaggtgaagatggg
ctggatgaaatttattccttcagtgagagtctgagacaactgtgtgtctttaagaaaact
gagaggtattccgtcccttggctctgcacactgaccattggctccaatttggctataaaa
attgtggcttacaaagcgattatgcaggagaaagttaaaaagtcttggacagttgtggat
gcaagaaccctaaaaaaagaagatatacaaaaagaaacagtttattgcttacaggacgac
gacgaaacggaggttccaaaagaggacactattcaagggttccgctatggaagtgatata
gttcctttctctaaagtggatgaagaacaaatgaaatataaatcagaggggaagtgcttc
tctgttttgggattttgtagatcttctcaggtccacagaagatattttgtgggaaatcaa
gtcctaaaggtctttgcagcaaaagatgatgaggcagcagcagtggcactttcctccctg
attcatgctttggatgaattagacatggtggctgtggttcgatatgcttatgccggaaga
actaatcctcaagttggcatggcttttccttatatcaaggatgcctatgagtgtttaatg
tacgtgcagctgccttttatggaagacttgcgacaatatatgttttcatccttgaaaaat
agtaagaaatgcactcccacagaggctcagttgagtgctgttgatgctttgattgactcc
atgagcttggtaaagaaagatgaaaaggaagacaccattgaagacttgtttccaaccacc
aaaatcccaaaccctcaacatcagaggttgtatcagtgtctggcgcacagagctttacat
ccccaagagcctctgcccccaattcagcagcatattttgaatatgctggatccccctgct
gaggtgacagctaaatgtcagattcctctctctaaaataaagaccgttttccctctgact
gaagccaccaagaaaaaggatcaagtgcctgctcagaacattttcccagacaaccatgaa
gagggacccgcctctaaaaaactgaagactcaggaaggggaagcatgctttagcgtctcc
agcctggctgaaggcagtgtcaccagagtcggaagtgtgaatcctgctgagaacttccgt
gttctagtgaggcagaagaaagccagctttgaggaagcgagtcgccagctaataaatcag
atcgagcagtttttggatactaatgaaacaccgtattttatgaagagcatggactgcatc
acagtgttccgggaagaagccattcaggtttcggaagagcagtgctttaacaatttcctg
aaagcccttcgagagaaagtggaaattaaacaattaaagcatttctgggacattgtcgtt
caggatggaattactctgatcaccaaagatgaagcccccggaagttccatcacagctgaa
gaagccaaaaagtttctggcccctagagaaaatccaaatgaagacgcagcagccatattt
gcagaaggtggtgacgtggatgatttactggacttgatatag
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