Leopardus geoffroyi (Geoffroy's cat): 123599724
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Entry
123599724 CDS
T10761
Symbol
SNED1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1 isoform X1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lgf04990
]
123599724 (SNED1)
Domain-containing proteins not elsewhere classified [BR:
lgf04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
123599724 (SNED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
NIDO
EGF_TEN
fn3
EGF_2
EGF_CA
Ig_DSCAM-DSCAML_C
EGF_Teneurin
cEGF
Motif
Other DBs
NCBI-GeneID:
123599724
NCBI-ProteinID:
XP_045337938
LinkDB
All DBs
Position
C1:221380434..221470423
Genome browser
AA seq
1448 aa
AA seq
DB search
MLRGAAWALLLAAALGLGVRGVRGAVALADFYPFGTERGDAVTPKQDDGGSGLQPLSVPF
PFFGAEHSGLYVNNNGVVSFLKEVSQFTPAAFPIAKDRCVVAAFWADVDNRRAGDVYYRE
ATDPATLRRATEDVRRYFPELQDFSATWVFIATWHRVTFFGGSSSSPVNTFQTVLITDGK
FSFTIFNYESITWTTGTHASSGGDTTGLGGIAAQAGFNAGDGRRYFSIPGSRTADMVEVE
TTTNVGVPGRWAFRIDDAQVRVGGCGHTTSVCLALRPCLNGGKCIDDCITGNPSYSCSCL
SGFTGRRCHLDVNECASDPCQNGGTCTHSINSFSCRCPAGFGGPTCETALSPCDTRECEN
GGRCQAESGSAVCLCQAGYTGTACETDVDECASGPCLNGGSCVDLVGNFTCLCSEPFAGP
RCETGSHPVPDPCLSAPCQNGGTCVDAEEGYVCECPQGFTGLDCRERTPEHCGCRNGGRC
LEANTTLCQCPPGFFGLLCEFEVTATPCNMNTQCPDGGYCMEYGGSYLCVCHTDHNVSHS
LPSPCDSDPCFNGGSCDAHEDSYTCECPRGFHGRHCEKARPRLCSSGPCRNGGTCKEAGS
EYHCSCPYRFTGRHCEIGKPDSCASGPCHNGGTCFHYIGKYKCDCPPGFSGRHCEIAPSP
CFRSPCSNGGTCEDLGTDFSCRCRAGYMGRRCQAEVDCGPPAEVKHATLRFNGTRLGSVA
LYKCDHGYSLSSPNHVRVCQPQGVWSEPPQCHGRRTAQLNKLTLTSSRSPSFCSLRLRGG
GGWVERVTSRPPLALCSKPAEGGERPLGYTDGRALCPPHLETDECQMQPCRNGGSCRDLP
GAFVCQCPAGFTGVHCETEVDACDSSPCQHGGRCENGGGAYLCVCPEGFFGYHCETVSDP
CFSSPCGGRGYCLASNGSHSCTCKVGYTGKDCAKELFPPTALKVERVEESGVSISWRPPE
GQAARQMLDGYAVTYASSDGAYRRTDFVDRSRSSHQLRALAAGRAYNISVFSVKRNANNK
NDISRPVLLLTRTRPRPVEGLEVTNVTASTISVRWALHRIRHATVSGVRVSIRHPEAQED
QSTDMDKSVDKFTFGALLPGRRYTIHVTALSGLGGQEPPTESLASAPLHVWTRPLPPANL
TAARVTATSAHVVWDNPTPSTLLEAYVINVTTSQSTKSRYVPNGRLTSYTVRDLLPGRRY
QLSVTAVQSAEGDQLHSEPAHLYIITSPRDGADRRWHREGLHPRVLRNRPPPVRLPEHLL
SDRDAPEAQTPAPRFSELVDGRGRVSAKFSGSPGKSVTVRSQPTALAQLENTEEAPKQVP
EQVGLALQLPERSSDKDTENTPGNCSENPCQNGGTCVPGVDTNSCDCSPGFKGRRCELAC
TKVPQPCTRLFSETKAVPVWEGGACHHVYKRVYKLHQDICFKESCESTSSKRAPNRKQSN
NSPTQKKS
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcggcgccgcctgggcgctgctcctggccgccgccctggggctcggggtgcgc
ggggtgcgcggcgcggtggccctcgccgacttctacccgttcggcacggagcgcggcgac
gctgtcacccccaagcaggacgacggcggctcggggctgcagccgctctccgtgcccttc
ccgttcttcggcgccgagcactccggactctacgtgaacaataacggagtcgtctccttc
ctgaaggaggtctctcagttcacccccgcggccttccccatcgccaaggaccgctgcgtg
gtggcagccttctgggcagacgtggacaatcggcgtgcaggtgacgtgtactacagggag
gccactgaccctgccacgctgcgcagagccacagaggatgtcaggcgctacttccccgag
ctccaggacttctccgccacctgggtcttcatagccacctggcaccgtgtgaccttcttt
ggaggcagctcctcttcccccgtcaacacgttccagactgtgctcatcactgacggcaag
ttctccttcaccatcttcaactacgagtccatcacgtggaccacaggcacacacgccagc
agcgggggtgacaccactggcctgggagggatcgcggcccaggctggcttcaatgcaggt
gacgggcggcgctacttcagcatccccggctcacgcaccgcggacatggtcgaggtggag
accaccaccaacgtgggcgtgcccgggcgctgggcgttcagaatcgatgatgcccaggtg
cgcgtggggggctgcggccatacaacctccgtgtgcctggccctgcgtccctgtctcaac
ggcggcaagtgcattgacgactgcatcacgggcaacccctcctacagctgctcctgcctc
tcaggcttcaccgggaggcggtgtcacctggacgttaacgaatgtgcttccgatccatgt
cagaacggcgggacctgcacacacagcatcaacagcttcagctgccgatgcccagccggc
ttcgggggtcccacctgtgagacagcactgtctccatgtgacaccagagagtgtgagaac
ggcggccggtgccaggcggagagcggctcggcggtgtgcctgtgccaggccggctacacg
ggcacggcctgcgagacggatgtggacgaatgtgcctcgggcccgtgcctgaacggaggc
tcgtgtgtggacctcgtggggaatttcacctgcctgtgctcagagccgttcgcgggacct
cgctgcgagacaggaagccacccggtgcccgacccctgcctctcagccccttgccagaac
gggggcacctgtgtggatgcagaggagggctacgtgtgcgaatgcccccagggcttcact
ggcctcgactgcagggagagaacccctgagcactgtgggtgccgcaatggtggcagatgc
ctagaggccaacaccaccctctgccagtgtcccccagggttctttgggctcctctgtgaa
tttgaagtcacagccacgccctgcaacatgaacacgcagtgcccggacgggggctactgc
atggagtacggggggagctacctctgcgtctgccacactgaccacaacgtcagccactca
ctgccatcaccctgtgactcggacccctgcttcaacggaggctcctgtgacgcccatgag
gactcctacacttgcgagtgcccccgagggttccatggcaggcactgcgagaaagcccgg
ccacgcctgtgcagctcggggccctgccggaacgggggcacgtgcaaggaggcaggcagc
gaataccactgcagctgcccctaccgcttcaccgggaggcactgcgagatcgggaagcca
gactcatgtgcctcgggcccctgtcacaatggcggcacctgctttcactacatcggcaaa
tacaagtgcgactgtcccccaggcttctccgggcggcactgcgagatagccccatccccc
tgcttccggagcccctgctcgaatgggggtacctgtgaggacctaggcacagatttctcc
tgccgctgccgagcagggtacatgggacgccggtgccaggcggaggtggactgcggcccc
ccagcggaggtgaagcatgccacgctgcgttttaacggcacccggctgggctcggtggcc
ctgtacaagtgtgaccacggctacagcctgagctcccccaaccacgtccgagtctgccag
ccacagggcgtctggagcgaacctccacagtgccacgggagacggacagcgcagctgaac
aagctgaccttgacctcctctcgcagcccctccttctgcagcctccgcctcaggggtgga
ggaggttgggtggagagagtcacatcccgaccacccctggccctgtgctccaagccagca
gagggaggggagaggcctttggggtacactgacggacgagccctgtgccctccacaccta
gagacagatgagtgccaaatgcagccttgcagaaatggaggctcctgcagggacctcccg
ggggcctttgtctgccagtgccccgcaggcttcactggagtccactgcgagacagaggtg
gatgcctgcgactccagcccctgccagcacggaggccggtgtgagaacggtggcggggcc
tacctgtgcgtctgcccagagggcttcttcggctaccactgcgagacagtgagcgacccc
tgcttctccagcccctgtgggggccgcggctactgcctggccagcaacgggtcccacagc
tgcacctgcaaagtgggctacacgggcaaggattgcgccaaagagctcttcccgccaacg
gccctcaaggtggagcgagtggaggagagtggggtgtccatctcctggcgtccacctgaa
ggtcaggccgccaggcagatgcttgacggctacgcggtcacctacgcctcctcggacggt
gcctaccgccgcacagacttcgtggaccggagccgctcctcacaccagctccgggccctg
gcagccggcagagcctacaacatctccgtgttctctgtcaagcgcaacgccaacaacaag
aatgacatcagcaggccggtgctgctcctcacccgcacacgaccccgccccgttgagggc
cttgaggtcaccaacgtgacagccagcaccatctcagtgcggtgggctctgcacaggatc
cgtcacgcaactgtcagcggcgttcgtgtgtccatccggcatcccgaggcccaggaggac
cagtccaccgatatggacaagagcgtggacaagttcacgttcggggccctgctgccagga
aggagatacaccatccacgtgactgccctcagtgggctcgggggacaggagcctcccacc
gagagtctggcctcggccccgctgcacgtgtggacgcggcccctgccaccagcaaacctg
accgccgccagagtcacggccacctctgcccacgtggtctgggacaaccccaccccaagt
accttgctggaggcatacgtcatcaacgtgaccaccagccagagcaccaaaagccgctac
gttcccaacggaaggctgacgtcctacacggtgagggacctgctgccagggcggcggtac
cagctctcggtgacagccgtgcagagcgcagagggcgaccaactgcacagcgagcctgct
cacctctacatcatcacctccccaagggacggcgctgacagacgctggcacagggaggga
ctccatccacgggtgctcagaaacagaccgccccccgtgcgcctgccggagcacctgctc
agtgaccgtgacgcccccgaagctcagaccccggcccccaggttctcggagcttgtggac
ggcagagggcgagtgagtgccaagtttagtggctcacctggcaaatcggtcaccgtgaga
tcacaacccacggctctggcgcagctcgagaacacggaggaggcccccaagcaggtgcct
gagcaagtcggcctggccctccagctccctgaacgcagcagcgacaaggacacggaaaac
actcctgggaactgttcagaaaacccctgtcagaacggaggcacctgcgtgccaggtgtg
gacaccaacagctgtgactgcagcccagggttcaaaggcagacgctgtgagctggcctgc
accaaggtgccgcagccctgcactaggctcttctccgagaccaaggccgtgcccgtctgg
gaaggaggagcctgccaccacgtgtacaagagagtctacaagctgcaccaggacatctgc
ttcaaagagagctgcgaaagcacgagcagcaagagagccccgaacaggaaacaaagtaac
aacagtccgacacagaagaaatcttag
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