Leopardus geoffroyi (Geoffroy's cat): 123599731
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Entry
123599731 CDS
T10761
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04151
PI3K-Akt signaling pathway
lgf04382
Cornified envelope formation
lgf04510
Focal adhesion
lgf04512
ECM-receptor interaction
lgf04820
Cytoskeleton in muscle cells
lgf04926
Relaxin signaling pathway
lgf04933
AGE-RAGE signaling pathway in diabetic complications
lgf04974
Protein digestion and absorption
lgf05146
Amoebiasis
lgf05165
Human papillomavirus infection
lgf05200
Pathways in cancer
lgf05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
123599731 (COL4A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123599731 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
123599731 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
123599731 (COL4A2)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
123599731 (COL4A2)
09154 Digestive system
04974 Protein digestion and absorption
123599731 (COL4A2)
09158 Development and regeneration
04382 Cornified envelope formation
123599731 (COL4A2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
123599731 (COL4A2)
09162 Cancer: specific types
05222 Small cell lung cancer
123599731 (COL4A2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
123599731 (COL4A2)
09174 Infectious disease: parasitic
05146 Amoebiasis
123599731 (COL4A2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
123599731 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lgf04147
]
123599731 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
lgf00536
]
123599731 (COL4A2)
Exosome [BR:
lgf04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
123599731 (COL4A2)
Glycosaminoglycan binding proteins [BR:
lgf00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
123599731 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
123599731
NCBI-ProteinID:
XP_045337965
LinkDB
All DBs
Position
A1:80095535..80268097
Genome browser
AA seq
1712 aa
AA seq
DB search
MDRHQCSASSPALRRWLLLGAVTVGLLAQSVLAGVKKFDVPCGGRDCSGGCQCFPEKGGR
GQPGPVGPQGYTGPPGLQGFPGLQGRKGDKGERGSPGITGPKGDVGARGVSGFPGADGIP
GHPGQGGPRGPPGYDGCNGTRGDVGRQGPVGPGGFAGPPGPQGPKGQKGEPYALSSVDRD
KYRGEPGEPGLVGFQGPPGRHGPVGQMGPVGAPGRPGPPGPPGPKGQPGNRGLGFYGQKG
EKGDMGQPGPNGIPSDIHHAIIGPMKEMFHPDQYKGEKGSEGEPGRKGIALKGEEGVMGF
SGIRGSPGFDGEKGSPGQKGSKGLDGYQGPDGPPGLKGEVGDRGPPGAPAYSPHPSLAKG
VRGDPGFPGAHGEPGSRGEPGDPGPPGPPGTSIGDEDGKRGLPGEMGPKGFIGDPGIPAL
YPGPPGTDGKPGPRGPPGPPGLPGPDGFLFGLKGAEGNVGYPGPSGFPGARGQKGWKGDA
GDCKCAEGDQFIGGLPGPPGPKGLPGINGEPGKKGSQGDPGQHGIPGFPGFKGAPGNVGP
PGPKGVKGDSRAITTKGERGQPGVPGMPGLKGDDGVPGRDGLDGFPGLPGPPGDGITGPP
GDIGYPGTPGTKGAPGERGPPGLGLPGPKGERGFPGDVGSPGLPGFPGPAGPPGAPGQID
CDTGVKRPIGDDGQKTVRPDCVGGPKGAPGLRGPPGPTGAKGLPGIPGPSGADGVPGLKG
LPGDPGREGFPGPPGFVGPRGSKGVAGLRGPDGHPGPTGLPGPVGPPGDRGLPGEVLGAQ
PGPRGDAGLPGHPGLKGPPGERGPPGFRGSQGMPGMPGLKGQPGFPGPSGQPGLPGPPGL
HGFPGAPGQEGPLGLPGAPGRGGLPGDRGDPGDIGIPGPVGMKGLSGDRGDPGLLGERGP
PGGPGFKGMSGIPGVPGPKGSRGSPGMDGFQGMVGLKGRAGLPGNKGETGFFGIPGLKGL
AGEPGVKGSRGDPGPPGPPPIIQPGMKDIKGEKGDEGPMGLKGYLGLKGVPGMPGIPGLS
GIPGLPGKPGHIKGVKGDIGVPGVPGLPGFPGVPGPPGIIGFPGFTGSRGDKGAPGRAGL
YGEVGPTGDFGDIGDTIDLPGSPGLKGERGVAGAPGLKGFFGAKGTEGEVGFPGITGVPG
VQGPPGPKGQAGFPGLTGLQGPQGEPGRAGAPGDKGDYGWPGIPGSPGFPGIRGISGLHG
LPGTKGFPGSPGVDAHGDPGFPGPAGDRGDPGEANTRPGPVGAPGQKGERGNPGERGPVG
SPGLQGFPGITPPSNISGSPGDKGAPGIFGPEGYRGPPGPPGPAALPGRKGDEGNPGAPG
NPGTKGWGGDPGPQGRPGVFGLPGEKGPRGEPGLMGNTGATGSVGDPGPKGPKGDRGLPG
APGSVGSPGIVGIPQKITVQPGPVGPHGRRGPPGAQGEMGPQGPPGEPGFRGAPGKAGPQ
GRGGVSAVPGFRGDQGPMGQQGPIGQEGEPGRPGTPGLPGMPGRSVSIGYLLVKHSQTDQ
EPMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYASR
NDKSYWLSTTAPLPMMPVAEDEIKPYISRCSVCEAPAVAIAVHSQDVSIPHCPAGWRSLW
IGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGGRGTCHYYANKYSFWLTTIP
ERSFQGSPSADTLKAGLIRTHISRCQVCMKNL
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtcaccagtgctcggcgtccagccctgccctgcggcggtggctgctgctgggg
gctgtgacagtggggctcctggcccagagcgtcctggcgggcgtgaagaagttcgacgtg
ccctgcgggggcagagactgtagcgggggctgccagtgtttccctgagaaaggagggcgg
gggcagccagggccagtgggcccccaggggtacaccgggcccccaggcctgcagggattc
ccaggactgcagggccgcaaaggtgacaagggcgagagggggtcaccggggatcacagga
ccaaaaggagatgtgggagcaagaggcgtttccggattccctggtgccgacggaattccc
ggacacccggggcaaggtgggcccagaggaccacctggttacgatggctgcaatgggacg
agaggagacgtgggccgccagggacccgtcggccctggggggttcgctggccctcctggg
ccccaaggacccaaggggcagaaaggtgagccgtacgcgctttccagtgtggaccgcgac
aaatacaggggtgaacctggggagcctggattggtcggtttccaggggcctcccggccgc
cacgggcctgtgggacagatgggtccagttggagctccaggaagaccaggcccgcctgga
ccccctggaccaaaaggacagccgggcaacagaggacttggtttttatggacagaaggga
gagaagggtgacatgggacagccgggacccaatgggattccatcagacatccaccatgcc
atcatcgggcctatgaaggagatgttccacccagatcagtataagggcgaaaaggggagt
gagggggagccgggaagaaagggcatcgccttgaagggagaagaaggagtcatgggcttc
tcgggcatacggggttctcctggctttgatggcgagaaaggttcaccaggacaaaaggga
agcaaaggactggatggttatcaaggcccggatggacccccgggactcaagggagaagtg
ggcgaccgcggccccccaggtgcccctgcgtactcacctcatccctccctggccaaaggt
gtcaggggtgacccaggattcccaggggcccacggggagccaggaagccggggtgaacca
ggagacccgggcccaccaggcccccctggcacgtccatcggagatgaagatggcaagaga
ggtttaccaggtgaaatggggcccaaaggcttcataggagacccaggcatccccgcgctg
taccccggccctccgggaaccgacggaaagccagggccccgaggaccgccagggcctccc
ggactacctgggccagacggtttccttttcggccttaaaggagcggaaggaaatgtgggc
taccctggcccttctggtttccctggggctcgcggacagaaaggctggaaaggtgatgct
ggggactgtaagtgcgcagaaggcgaccagttcatcgggggcctcccggggccaccagga
cccaagggccttccaggcatcaacggggagcctgggaagaaagggagccagggagacccc
ggccagcatggcatccctgggttcccagggttcaagggcgcccctggcaacgtcgggcct
ccagggcccaaaggggtgaagggcgattctcgggcaatcaccaccaaaggtgagagggga
cagccaggtgtcccaggcatgcctggtctgaaaggtgacgacggtgtcccagggcgcgac
gggctggatggattcccaggcctcccaggcccccctggtgatggcatcacaggcccccca
ggggacatcggttacccaggaacaccgggcacgaagggtgccccaggagagaggggcccc
ccgggattgggcctgcccggccccaaaggcgagcgcggtttccccggagatgtgggatca
cctggactgccaggctttcccgggcccgctggtcccccgggtgctcccggacagatagac
tgcgatacaggtgtgaaaaggcccattggagatgatggacagaagaccgtgcggccagat
tgtgtcggaggacccaagggagcgccaggcctacggggacccccaggccctacaggtgcc
aagggcctcccagggataccaggaccctcaggagctgacggagtaccagggctcaagggt
ctcccaggagacccaggtcgtgaaggattcccaggacccccagggttcgtggggccccga
ggatccaaaggtgtggccggcctccgtggcccagatggacacccaggtcccaccggtctg
ccggggcccgtcgggcccccaggggacaggggccttcccggagaagttctgggagcccag
cctgggcccaggggagatgctgggctccccggacaccctgggctgaaaggccctccggga
gagagaggtccacctggattccggggaagccagggcatgccaggaatgccaggcctgaag
ggccagccgggcttcccaggaccctcgggccagccaggcctgcccgggccaccaggactg
catggcttcccaggagctcctggccaggaggggcccttggggctgccgggcgccccaggc
cgcggaggtctgcctggggacagaggggacccaggtgacataggtatccccggccctgtg
ggcatgaagggtctttccggcgacagaggtgaccctggtttgttgggtgagaggggtccc
ccaggaggccctggatttaaaggaatgagcggaattcccggtgtccccggacccaaaggc
agtagaggttcacccgggatggacggtttccaaggcatggttgggctcaagggaagagct
gggcttccgggaaacaaaggagagaccggattttttggaattccaggactgaagggtctg
gctggtgagccaggtgtgaaaggcagccgcggggacccgggacccccaggaccacctccc
atcatccagccaggaatgaaagacatcaaaggggagaaaggagacgaggggcctatgggg
ttgaaaggctacctgggcctaaaaggtgtcccgggaatgccagggatccccgggctgtct
ggaatccccggcttgccagggaagccgggccacatcaaaggagtcaaaggagacatcgga
gtcccgggtgtgcccggattgccaggattccccggcgtgcccggcccccccggaatcatc
gggtttcccgggttcacaggaagtcggggcgacaagggagctccggggagagctggtctt
tacggcgaggttggccccacaggtgatttcggtgacattggagacaccatagacctgcca
ggaagcccaggcctgaagggggagcggggcgtcgctggagcaccaggtctaaagggattc
tttggggcaaaaggaacggagggtgaagtcggcttccccgggataacaggcgtgccaggc
gtccaaggccctccaggacctaaagggcaagcaggcttcccaggactgacagggctgcag
gggccacagggagagccggggcgggcaggagcgcccggtgacaaaggagactatggctgg
cccgggatcccaggctcaccaggttttccgggcatccgaggcatcagcggactccacggc
ttgccgggcaccaaaggctttccaggatccccaggtgtggacgcccacggagaccccggc
tttcccggtcctgccggggacaggggtgacccaggagaggccaacacccgcccaggccct
gtcggagccccaggacagaaaggggagcgaggaaatccaggggaacgaggcccagtcggg
agtccgggactgcagggatttccaggaatcaccccaccttccaacatctctgggtcacct
ggtgacaaaggggcgccgggcatatttggcccagaaggttatcgagggcccccggggcca
cctggacctgccgctctccctggaaggaaaggagacgagggcaacccaggagccccagga
aaccccgggaccaaagggtggggcggggaccccgggccccagggccggcctggcgtgttc
gggctcccaggagaaaaaggacccagaggggagccaggactcatgggaaacacaggagcc
accgggagtgtgggcgacccaggccccaaggggcccaaaggagacaggggactcccaggt
gcccccggttctgtgggatcccctgggattgtgggaatcccccagaagatcaccgtccag
ccagggccagtgggtccacacggaaggagaggccccccgggggcacagggagagatgggg
ccccagggccccccaggagagccaggtttccgaggggctccagggaaggcagggccccag
ggaagaggtggcgtttccgctgttcccggattccgaggagaccaggggcccatgggacag
caggggcccatcggccaggaaggggagccaggccgcccggggacccccggcctgcccggc
atgcccggccgcagcgtcagcatcggctacctcctggtgaagcacagtcagacggaccag
gagcccatgtgccccgtgggcatgaacaagctctggagtgggtacagcctgctgtacttc
gaaggccaggagaaggcgcacaaccaggacctggggctggcaggctcctgcctggctcgg
ttcagcaccatgccctttctgtactgcaacccgggtgacgtgtgctactacgccagccgc
aacgacaagtcctactggctctccaccacggccccgctgcccatgatgccggtggccgag
gacgaaatcaagccctacatcagccgctgttccgtgtgtgaggccccagccgtcgccata
gcggtacacagtcaagatgtctccatcccccactgcccagctggatggcggagtctgtgg
attggatattctttcctcatgcacacggcggccggcgacgaaggcggtggccagtcgctg
gtgtctccgggcagctgcctggaggacttccgcgcgacgcccttcatcgagtgcaacggg
ggccgtggcacctgccactactacgccaacaagtacagcttctggctcaccaccatcccc
gagcgcagtttccagggctcgccgtccgccgacaccctcaaggcggggctcatccgcacg
cacatcagccgctgccaggtgtgcatgaagaacctgtga
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