Leopardus geoffroyi (Geoffroy's cat): 123599737 Help Entry 123599737         CDS       T10761                                  Symbol COL4A1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism lgf  Leopardus geoffroyi (Geoffroy's cat) Pathway lgf04151   PI3K-Akt signaling pathway lgf04382   Cornified envelope formation lgf04510   Focal adhesion lgf04512   ECM-receptor interaction lgf04518   Integrin signaling lgf04820   Cytoskeleton in muscle cells lgf04926   Relaxin signaling pathway lgf04933   AGE-RAGE signaling pathway in diabetic complications lgf04974   Protein digestion and absorption lgf05146   Amoebiasis lgf05165   Human papillomavirus infection lgf05200   Pathways in cancer lgf05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:lgf00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     123599737 (COL4A1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     123599737 (COL4A1)    04518 Integrin signaling     123599737 (COL4A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     123599737 (COL4A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     123599737 (COL4A1)  09150 Organismal Systems   09152 Endocrine system    04926 Relaxin signaling pathway     123599737 (COL4A1)   09154 Digestive system    04974 Protein digestion and absorption     123599737 (COL4A1)   09158 Development and regeneration    04382 Cornified envelope formation     123599737 (COL4A1)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     123599737 (COL4A1)   09162 Cancer: specific types    05222 Small cell lung cancer     123599737 (COL4A1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     123599737 (COL4A1)   09174 Infectious disease: parasitic    05146 Amoebiasis     123599737 (COL4A1)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     123599737 (COL4A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:lgf04147]     123599737 (COL4A1)    00536 Glycosaminoglycan binding proteins [BR:lgf00536]     123599737 (COL4A1) Exosome [BR:lgf04147]  Exosomal proteins   Exosomal proteins of other cancer cells    123599737 (COL4A1) Glycosaminoglycan binding proteins [BR:lgf00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    123599737 (COL4A1) SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  123599737 NCBI-ProteinID:  XP_045337989 LinkDB All DBs Position A1:complement(79940456..80096219) Genome browser AA seq 1669 aa AA seqDB search MGPRLGVWLLLLPAALLLHEERSRAAAKGGCAGSGCGKCDCHGVKGQKGERGLPGLQGVI GFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPPGASGYPGNPGLPGIPGQDGPPGPP GIPGCNGTKGEPGPLGPPGLPGFTGNPGPPGLPGMKGDPGEIIGHVPGTLLKGERGFPGL PGAPGSPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSGPP GVPGQAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKPGPRGKPGKDGEKGEKGS PGFPGDAGYPGLPGREGFKGDKGEAGPPGPPGIVIGTGPLGEKGERGYPGSPGLRGEPGP KGFPGLQGQPGPPGFPVPELAGAPGFPGERGQKGDQGFPGTSLPGPSGRDGLPGPPGPPG PPGQPGHTNGIVECQPGPPGDRGAPGSPGQPGLTGEVGEKGQKGDSCLICDTAGLRGPPG PQGPPGEIGFPGQPGAKGDRGLPGRDGLEGLPGPQGVPGLMGQPGAKGEPGEIYFDARLK GDKGDPGFPGQPGMPGRAGTPGRDGHPGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDI GPPGPPGFGPIGPVGDKGQVGFPGNPGPPGQPGPKGEAGQVVPLPGPPGAQGLPGSPGFQ GPQGDRGFPGTPGRPGLPGEKGAVGQPGIGFPGPPGPKGVDGLPGDVGPPGSPGRPGFNG LPGNPGVPGQKGEPGIGLPGLKGLPGLPGIPGTPGEKGNIGGPGVPGEHGVIGPPGLQGI RGDPGPPGLQGPKGAPGVPGIGPPGAMGPPGGQGPPGSLGPPGLKGEKGFPGFPGLDMPG PKGDKGSPGLPGLTGQSGLPGLPGQQGTPGLPGIPGAKGEMGVMGTPGQPGSPGPAGVPG LPGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIG PTGDKGSRGDPGTPGMPGKDGQAGHPGQPGPKGDPGIGGTPGAPGLPGPKGSVGGMGLPG TPGEKGVPGIPGPQGVPGLPGEKGAKGEKGQAGLPGIGIPGRPGDKGDQGVAGFPGSPGE KGEKGSVGIPGIPGSPGPQGSPGSVGYPGSPGLPGDKGDRGLPGSAGIPGVKGEAGLPGK PGPAGPAGQKGEPGSDGIPGSAGEKGEPGLPGRAFPGFPGAKGEKGSKGDVGFPGQAGSP GIPGSKGEQGFMGPPGPQGQPGLPGAPGHAVEGPKGDRGAQGQPGLPGLPGPMGPPGLPG LDGLKGDKGNPGWPGAPGAQGPKGDPGFQGLPGIGGSPGLTGSKGDIGPPGVPGFQGQKG LPGLQGAKGDPGDQGFPGSKGLPGPPGPPGPYDIIKGEPGLPGPEGPPGLKGLPGPPGPK GQQGVTGSVGLPGPPGVPGFDGAPGQKGETGPFGPPGPRGFPGPPGPDGLPGSMGPPGTP SVDHGFLVTRHSQTTDDPQCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPIAGDNIRPFISRCAVCEAPAMVMAV HSQTIQIPQCPSGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG TCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT NT seq 5010 nt NT seq  +upstreamnt  +downstreamnt atggggccccggctcggcgtctggctgctgctgctgcccgccgccctcctgctccacgag gagcgcagccgggccgctgcgaagggcggttgtgctggctctggctgtgggaagtgtgac tgccatggagtgaagggacagaagggcgaaagaggcctcccaggcttgcagggtgtcatc gggttccccgggatgcaaggaccggaggggccgcaggggcccccgggacagaagggtgac actggagaacccggactgcctggaacaaaggggacaaggggacccccaggagcatcaggt tacccgggaaacccaggacttcctggtattcccggccaagatggcccccccggtcctcca ggtatccccggatgcaatggaacaaagggcgagccagggcctctggggcctccgggtttg cctggattcactggaaatcccggaccaccagggttaccaggaatgaagggggatccaggt gaaataattggccacgtgcctgggaccctgttgaaaggtgaaagaggatttcccggactc ccaggagcaccaggctcgccgggactgccagggctgcaaggtcctgtcggccccccggga tttaccggaccaccaggccctccaggtcctcctggccctccaggtgaaaaggggcaaatg ggcttaagtttccaaggcccaaagggcgacaagggtgaccaaggggtcagtgggcccccg ggggttccaggacaagctcaggttcaagaaaaaggagactttgccactaaaggagagaag ggtcagaaaggtgaacctggatttcagggaatgccaggggttggagagaaaggggagccc ggaaagccagggccccgaggaaaacctggcaaagatggcgaaaaaggagaaaaagggagt ccagggttcccaggtgacgcagggtacccaggactccctggacgagaaggtttcaaggga gacaaaggtgaagcaggtcccccaggcccacctggaatcgtgatcggcacgggacccttg ggagaaaaaggagagcgggggtacccagggtctccagggttgagaggagagccaggcccc aaaggtttcccaggattacaaggccagccaggccctccaggcttcccggtaccagagctg gcaggtgctcctggctttcccggtgaaagagggcagaaaggtgaccaagggtttccaggc acgtctttgccaggaccaagtggaagggacgggctcccgggtccccctgggcctcctggg ccccctggacagccgggtcacacaaatggaattgtggagtgccagcctggaccgccaggg gatcgaggtgcccccggaagtccggggcaaccagggctgacgggcgaagtcggagaaaaa ggtcagaaaggagacagttgcctcatctgtgacacagcaggacttcgtgggccccctgga ccacagggacccccaggagaaataggtttcccgggacagccaggggccaagggggacaga ggcttacccggcagagatggcctggaaggactgcctggaccgcaaggtgtgccagggctg atgggccagcccggagccaaaggagagcctggcgagatttacttcgacgcacggctcaaa ggagacaaaggggacccgggcttcccaggccagcccgggatgccgggcagagcaggcact ccggggagagacggccacccgggtcttcccggccccaaaggctccccgggttcagtaggg ttgaaaggagagcgtggcccccctggaggagttggattccctggcagtcgtggcgacatc ggccctcctgggcctccagggtttggccccatcggccccgttggtgacaaaggacaagtg ggttttccagggaaccctggacccccaggccagccaggtcccaagggtgaagctggacaa gttgtgcccctacctggtccccccggagcacaaggacttccggggtccccgggtttccaa ggaccccaaggtgaccgaggttttcccggaacgccgggaaggccaggcctcccgggagag aagggtgctgttggccagcctggaatcggatttccagggcctcctggccccaaaggtgtc gatggcctgcctggagacgtaggacctcccgggagcccaggccgcccaggatttaacggc ttgcctggcaacccgggtgtgcccggccaaaagggagagcctggcatcggtctgcctgga ctcaaagggttgcctggtcttcccggcatccctggcacacctggggagaagggaaacatc gggggaccgggcgttccgggagagcatggtgttatcggccccccaggcctccagggaatc agaggtgacccaggaccacctggattacaaggtcccaagggagcccctggagttcccggg ataggcccacctggagcgatgggcccccctggaggacagggaccaccagggtccttaggc cctcctggactgaagggagagaagggcttccccggatttccaggcctcgacatgccgggc cccaaaggagacaaagggtccccagggctgcccggcctgacagggcagtctgggctcccc ggtcttcccggacagcagggcacgcctggccttcccggcattccaggtgccaagggagag atgggtgtcatggggaccccggggcagcccggctcgccaggcccggcgggagtgccagga ttgcccggagaaaaaggggaccacggcttcccgggctcctcggggcccaggggagacccc ggcttcaagggcgacaaaggagatgtgggtctccctggcaagcctgggtccatggataag gtggacatgggcagcatgaagggtcagaagggagaccaaggagaaaaaggacaaattgga ccaactggtgataaaggatcccggggagaccctggaaccccgggaatgccaggaaaggac ggccaggcagggcatcccgggcagccaggacctaaaggtgaccccggcatcggcgggacc ccgggggctccagggctccctggacccaaaggatcggttggtggaatgggcctgccagga acacccggagaaaaaggcgtgcctgggatccccggcccacagggcgtccctggcttaccc ggggagaaaggcgcaaagggcgagaaagggcaggcaggcctccctggcattgggattccg ggccggcctggcgacaagggagatcaaggggttgcaggatttccgggaagtcctggagag aaaggagagaaaggaagcgtggggatcccggggatccctggctcccctggcccccaagga tcccctgggagcgttggctatccaggaagccctggcttgcctggggataaaggggacaga ggcctcccgggatcggctggcattcctggtgtcaagggagaagcaggtcttcctgggaaa cctggccccgcgggcccagccggccagaaaggggagcctggcagtgatggaatcccgggg tcggcgggagagaagggggaaccaggcctgcctggaagagcattcccagggttcccaggg gccaaaggagagaaaggttcaaagggcgacgtgggtttcccgggacaagccgggagtcca ggaattcccggatccaaaggagagcaaggattcatgggtcccccggggccacaaggacag ccgggcttacccggagctccgggccacgctgtggaggggcctaaaggagaccggggcgca cagggtcagcctggcctgccagggcttccgggacccatggggcctccggggctcccaggg cttgatggactgaaaggtgacaaaggaaacccaggctggccgggggctcccggtgctcaa ggacccaagggagatccaggattccagggcctgcctggaatcggtggctctccaggactc acgggctctaagggtgacataggacctccgggagttccaggatttcaaggtcagaaaggc ctccccggcctgcagggagctaagggcgatccgggtgaccagggcttccctggaagcaaa ggcctccctgggcccccaggccccccagggccctacgacatcatcaaaggagagccagga ctccctggtccagagggtcccccaggtctgaaggggcttccgggaccaccaggccccaaa ggacagcaaggtgtgacaggatccgtgggcttgcctggacctccaggtgttcccggtttt gatggtgctcctggccagaaaggagagacgggaccctttggcccccctggtccaagaggg tttccaggcccgccaggccccgacgggttgccaggatccatgggtcccccaggcacccca tctgttgatcatggcttcctggtgacccggcacagtcagacgacggacgacccccagtgt cctcctgggaccaaaattctttaccacgggtactccctgctctacgtgcaaggcaacgag cgggcgcacggccaggacttgggcacggctgggagctgcctgcgcaagttcagcacgatg cccttcctgttctgtaacatcaacaacgtgtgcaacttcgcctcccgaaatgactactcc tactggctgtccacccctgagcccatgcccatgtctatggcgcccatcgccggcgacaat atcagaccgttcattagcaggtgtgcggtgtgcgaggctccagccatggtgatggccgtg cacagccagaccatccagattccacagtgccccagcggctggtcctccctttggattggc tattccttcgtgatgcacaccagtgctggtgctgaaggttctggccaagccctggcatcc cccgggtcctgtctggaagagttcaggagcgcgccattcatcgagtgccacggacgtggg acttgcaattactacgcgaacgcatacagcttttggcttgccacgatcgagagaagcgag atgttcaagaagcccacgccgtccaccttgaaggcgggggagctgcgcacacacgtcagc cgttgccaagtctgtatgagaagaacataa

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