Leopardus geoffroyi (Geoffroy's cat): 123599844
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Entry
123599844 CDS
T10761
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03013
Nucleocytoplasmic transport
lgf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123599844 (SRRM1)
03015 mRNA surveillance pathway
123599844 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgf03019
]
123599844 (SRRM1)
03041 Spliceosome [BR:
lgf03041
]
123599844 (SRRM1)
Messenger RNA biogenesis [BR:
lgf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123599844 (SRRM1)
Spliceosome [BR:
lgf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
123599844 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
123599844
NCBI-ProteinID:
XP_045338166
LinkDB
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Position
C1:18389102..18421339
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AA seq
918 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATS
TSDILKVPKPEPVPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRR
RHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSS
SSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQS
NRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQ
QRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKET
SPRMQMGKRWQSPMTKSGRRRRTPSPPPTRRRRSPSPAPPPRRRRSPTPPPRRRTPSPPP
RRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSS
PVTKRRSPSLSSKHRKGSSPSRSTREPRSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASS
SPQRRQSPSPSTRPIRRVSRTPEPKKTKKAASPSPQSVRRVSSSRSVSGSPEPAVKKPPA
PQSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPARNSDPEGGGKKKKKKKDKKHKKDKKHK
KHKKHKKEKAVAAAAAAAVTPAAIAAPTTTSAQEEPEAEPEPKKETESEPEDNLDDLEKH
LREKALRSMRKAQVSPQS
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcagaacaggataatcggttcagcaacaaa
cagaagaagttactgaagcagctgaaatttgcagaatgcctagaaaaaaaggtggatatg
agcaaagtaaatttggaggttataaagccttggataacaaaacgagtaacggaaatcctt
gggtttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gactccaaaatgatgcaaatcaacctgactgggtttttgaatggaaaaaatgctagagaa
tttatgggagaactgtggcccctgctcttaagtgcacaagaaaacatcgctggaatccct
tctgcttttctagaactgaagaaagaagaaataaaacaaagacaaattgaacaagaaaag
ttggcatctatgaaaaagcaagatgaagacaaggataagagggataaggaagaaaaagaa
agcagcagagaaaaaagggagaggtctcggagcccaagaagacgcaaatccagatctcct
tcccctagaagacgctcttcccctgtcaggagagagagaaagcgcagtcattctcggtct
ccccgccacagaaccaagagccggagtccttcccctgctccagaaaagaaggaaaaaact
ccagagctcccagaaccatcagtgaaagtaaaagaaccttcagtacaagaggccacttct
actagtgacatcctgaaagttcccaaacctgaacctgtaccagagcctaaagaaccttct
ccagagaagaattccaaaaaagaaaaggagaaggagaagacccgaccaagatctcggtca
cgttccaaatcaagatcccggacacggtctcgctctccttctcatactcgacctagacgg
cgtcatagatcccgatcaagatcatactccccgagaaggcggccaagcccgagaaggcgg
ccctctcctcgaagaagaactccaccgagacgaatgccacctccacccaggcataggaga
agtagatctccagtgagacgaagaaggcgttcatcagcgtccttgtctggaagtagttcg
tcatcttcttcttctcgttcccggtcaccgccaaagaagcctcctaagaggacatccagc
ccccctcggaaaactcgtaggttatctccttcagcaagtcctccgaggcgaaggcatagg
ccatcacctccagcaactccaccgccaaaaactcgtcattccccaacaccccagcagtca
aaccgtacaagaaaaagtcgtgtttctgtctctccagggagaacttcaggtaaagtgaca
aaacacaaaggtactgagaaaagagagtccccttcaccagcacctaagcctagaaaagta
gagttatctgaatcggaagaagataaaggtggcaaaatggctgcagcagattctgtgcag
cagagacgtcagtacagacgacagaaccagcagtcttcatctgattctggctcctcttct
tcctcagaagatgagcgacccaaaaggtcccatgtgaagaatggtgaggtaggcaggcgg
cggagacattccccttcccggagtgcctctccatcacctcgaaagcgccagaaagagact
tcccctcggatgcaaatgggaaagcgatggcaatcgccaatgactaaaagtggtagacgg
aggaggaccccctccccaccacccaccagaaggcgccgttctccttctcctgcccctcct
cctcgaaggcgcaggtctcccacaccgccacctcgacgaaggactccttctcctcccccc
cggcgccgctcaccttccccaagaagatactctcctccaatacagaggagatactctcct
tctccgcctccaaagagaagaacggcttctccacctccccctcctaaacgtagggcatcg
ccatctccaccaccaaagcgccgggtctcccattctccaccacccaaacaaagaagctcc
ccggtcaccaagagacgttcgccttcgttatcatcaaagcataggaaagggtcttccccg
agccgatctacccgggagccccggtcaccacaaccaaacaaacggcattcgccctcacca
cggcctcgagctcctcagacctcctcaagtcctccacctgttcgaagaggagcatcatca
tcaccccaaagaaggcagtccccatctccaagtactaggcccattaggagagtctccagg
actccggaacccaaaaagacaaagaaggctgcctcaccaagccctcagtctgtaaggagg
gtttcatcctcccgatctgtctcaggatctcctgagccggcagttaaaaaacccccagca
cctcagtctcctgtccagtctcagtcaccctctaccaactggtcaccagcggtaccggtc
aaaaaggctaaaagcccaacaccaagcccatctccggcaaggaactcagacccagaagga
ggtggaaagaaaaagaagaaaaagaaggacaagaaacacaaaaaggataagaagcacaag
aagcacaaaaaacacaagaaggaaaaggccgtggctgcagccgctgcagctgctgtaacc
cctgcagccattgctgctcccacaaccacatcagcacaggaggaaccagaagcggagccc
gagcctaagaaggagaccgaaagcgagcccgaagacaacctcgatgacttagaaaagcac
ctgcgtgaaaaggcgctgaggtcgatgcggaaggctcaagtgtccccacagtcttag
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