Leopardus geoffroyi (Geoffroy's cat): 123599897
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Entry
123599897 CDS
T10761
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lgf03000
]
123599897 (SOX1)
Transcription factors [BR:
lgf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
123599897 (SOX1)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
123599897
NCBI-ProteinID:
XP_045338331
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Position
A1:81380174..81383567
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AA seq
392 aa
AA seq
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MYSMMMETDLHSPGGAQAPTNLSGPAGAGGGGGGGGGGGGGGGVAKANQDRVKRPMNAFM
VWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYK
YRPRRKTKTLLKKDKYSLAGGLLAAGAGGGGAAVAMGVGVGVGAAAVGQRLESPGGAAGG
GYAHVNGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGAGGAHPHAHPAHPHPHHPHAH
PHNPQPMHRYDMGALQYSPISNSQGYMSASPSGYGGLPYGAAAAAAAAAGGAHQNSAVAA
AAAAAAASSGALGALGSLVKSEPSGSPPAPAHSRAPCPGDLREMISMYLPAGEGGDPAAA
AAAAAQSRLHSLPQHYQGAGAGVNGTVPLTHI
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagaccgacctgcactcgcctggcggcgcccaggcccccacg
aacctgtcgggcccggccggggcgggcggcggtgggggtggcggtggcggcggcggcggc
ggcggcggggtcgccaaggccaaccaggaccgggtcaagcggcccatgaacgccttcatg
gtgtggtcccgcgggcagcggcgcaagatggcccaggagaaccccaagatgcacaactcg
gagatcagcaagcgcctgggcgccgagtggaaggtcatgtccgaggccgagaagcggccg
ttcatcgacgaggccaagcggctgcgcgcgctgcacatgaaggagcacccggattacaag
taccggccgcgccgcaagaccaagacgctgcttaagaaggacaagtactcgctggccggc
gggctgctggcggccggcgcgggcggcggcggcgcggcggtggccatgggcgtgggcgtg
ggcgtgggcgcggcggccgtgggccagcgcctggagagcccgggcggcgcggcgggcggc
ggctacgcgcacgtcaacggctgggccaacggcgcctaccccggctcggtggcggcggcg
gcggcggccgcggccatgatgcaggaggcacagctggcctacgggcagcacccgggcgcg
ggcggcgcgcacccgcacgcccacccggcgcacccgcacccgcaccacccgcacgcgcac
ccgcacaacccgcagcccatgcaccgctacgacatgggcgcgctgcagtacagccccatc
tctaactcgcagggctacatgagcgcctcgccctcgggctacggcggcctcccctacggc
gccgcggccgccgccgccgccgccgcgggcggcgcgcaccagaactcggccgtggcggcg
gcggcagcggcggcggccgcgtcgtcgggcgccctgggcgcgctgggctcgctcgtcaag
tccgagccgagcggcagcccgcccgcccccgcgcactcgcgggcgccgtgccccggggac
ctgcgcgagatgatcagcatgtacttgcccgccggcgagggcggagacccggcggcggcc
gcggcggccgcggcgcagagcaggctgcactcgctgccgcagcactaccagggcgcgggc
gcgggcgtcaacggcacggtgcccctgacgcacatttag
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