Leopardus geoffroyi (Geoffroy's cat): 123600823
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Entry
123600823 CDS
T10761
Symbol
CRTAM
Name
(RefSeq) cytotoxic and regulatory T-cell molecule
KO
K16361
cytotoxic and regulatory T-cell molecule
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
123600823 (CRTAM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lgf04515
]
123600823 (CRTAM)
04090 CD molecules [BR:
lgf04090
]
123600823 (CRTAM)
Cell adhesion molecules [BR:
lgf04515
]
Immunoglobulin superfamily
Nectin family
123600823 (CRTAM)
CD molecules [BR:
lgf04090
]
Proteins
123600823 (CRTAM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-set_2
Ig_3
I-set
ig
Ig_2
V-set
Adeno_E3_CR1
DUF4834
FraC
Herpes_gE_N
C2-set_3
SID-1_RNA_chan
C1-set
Neur_chan_memb
Orf78
Motif
Other DBs
NCBI-GeneID:
123600823
NCBI-ProteinID:
XP_045339173
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All DBs
Position
D1:19866716..19893956
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AA seq
400 aa
AA seq
DB search
MTTARHSMWWRLCSLLACFPLQEAFLTNHTETVTVEEGQTLTLKCVVSQGKTTSLQWLAP
SGFTIFLNEHPALKNPKYQLLHHSAHQLSIRVLNVSQQDEGVYKCLRYSSSVRTKEVKVI
VTATPSTPILEASVTRMQNGKEHVTLKCSTVRSKPPPQITWILGNDIELYGETHHEFETD
GKKCNSSSILRVYTYSKNSTVDCIIRHKGLQGRKLVAPFRFEDMVTDRETASDALEKNSP
SSADPQQPTSTVAVVEDSNTTEIDKEEKNQTAQDPDLTTETNLQYVGVIRKKNGILLLTL
VSFLIFILFIIVQLFIMKLRKAHVIWKKENEISEHTLESYRSRSNNEETSSQEKKDQTFH
SKSYMNYITRLYSEAKTKRKDDSWSSKFKGEPAHIPESIV
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagcacggcacagtatgtggtggagactttgcagcttgctggcttgcttcccc
ttacaagaagcctttctgaccaaccacacagaaacagtcaccgtggaggaaggccagacg
ctcactctcaagtgtgtcgtttctcaggggaagaccacatccctgcagtggctggcccca
tcagggttcaccatttttttaaatgagcatcctgctttaaaaaatcccaaataccagctt
ctgcatcactccgcccatcagctctccatccgcgtgcttaatgtcagccagcaagatgaa
ggcgtgtacaagtgtttacgatacagcagctccgtgagaacaaaggaagtaaaagtgatc
gtgacagcaactccttccacaccaatcctggaggcttcagttaccagaatgcaaaatgga
aaagaacacgttacacttaaatgctccaccgtgagaagtaagccccctccgcagataact
tggattttagggaacgacatagagctctacggtgaaacccaccatgaatttgaaaccgat
gggaagaaatgtaacagcagcagcatcctcagagtctacacgtacagcaaaaactcaaca
gtggactgcattatccgacacaaaggtctacaaggaagaaaactggtggcaccattccga
tttgaagatatggttactgatcgagagacagcttcagatgccctggagaaaaactctcca
tcgtctgcagaccctcagcagcccactagcactgttgcagtagtggaagattctaataca
acagagattgacaaggaagagaaaaaccaaaccgctcaagatcctgacttaaccactgaa
acaaatcttcagtatgtgggggtgataaggaagaaaaatggcattctgctgctcaccctg
gtctcctttctcatcttcatactcttcatcatcgtccagctcttcataatgaagcttcgg
aaagcacacgtgatctggaaaaaagagaatgaaatttcagaacacacgctggaaagttac
agatcgaggtcaaataatgaagaaacatcatcccaagagaaaaaggaccaaactttccac
tcgaagagctacatgaactacatcacacggttgtactctgaagcaaaaacaaagcggaag
gacgactcatggagttcgaaattcaaaggagagcccgctcatataccagagagcatcgtg
taa
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