Leopardus geoffroyi (Geoffroy's cat): 123600933
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Entry
123600933 CDS
T10761
Symbol
NFRKB
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123600933 (NFRKB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lgf03036
]
123600933 (NFRKB)
Chromosome and associated proteins [BR:
lgf03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
123600933 (NFRKB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
Motif
Other DBs
NCBI-GeneID:
123600933
NCBI-ProteinID:
XP_045339421
LinkDB
All DBs
Position
D1:complement(26561576..26601284)
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AA seq
1309 aa
AA seq
DB search
MDSLDHMLTDPLELGPCGDGHGTRIMEDCLLGGTRVSLPEDLLEDPEIFFDVVSLSTWQE
VLSESQREHLQQFLPHFPEDSLEQQNQLVLALFSGENFRFGNPLHIAQKLFRDGHFNPEV
VKYRQLCFKSQYKRYLTSQQQYFHRLLKQILASRNDLLEMARRSGPALPFRQKRPSPSRT
PEEREWRTQQRYLKVLREVKEECGDTDLSSDEEATLDLQEKFSFEDLSSWLPSSPARSPS
PAVPLRVVPTLSTTDMKTADKIELGDSDLKIMLKKHHEKRKHQPDHPDLLTGDLTLNDIM
TRVNAGRKGSLAALYDLAVLKKKVKEKEEKKKKKIKLIKSEAEDLAEPLSSADGIPPLSQ
APSPLAIPAIKEEPLEDLKPCLGINEISSSFFSLLLEILLLEGQASLPMLEERVLDWQSS
PASSLNSWFSAAPNWAELVLPALQYLAGESRAVPSSFSPFVEFKEKTQQWKLLGQSQDNE
KELAALFQLWLETKDQAFCKQENEDSSDATTPVPRVTDYVVRPSTGEEKRVFQEQERYRY
SQPHKAFTFRMHGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAAR
LPNGEGTRAEICELLKDSQFLAPDVTSTQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIY
LHRDRSEEEFERIHQAQAAAAKARKALQQKPKPPSKVKSGSKESSLKVLSSGPSEQSQMS
LSDSSMPPTPVTPVTPTTPALPATPISPPPVSSVNKSGPTPVSEPAKSSSGVLLVSSPTM
PQLGTMLSPASSQTPPNSQAAARVVSHSGSAGLPQVRVVAQPGLPTATQQSAGPTQTLPQ
MPAGPQMRVPATATQTKVVPQTVMATVPVKAQTAAATVQRPGPGTGLTMTSLPATASPAS
KPATSSPGSSAPSASTAAVIQNVTGQNIIKQVAITGQLGVKPQAGSSIPLTATNFRIQGK
DVLRLPPSSITTDAKGQTVLRITPDMMATLAKSQVTTVKLTQDLFGTGSGTAGKGISATL
HVTSNPVHATDSPAKASSASAPSSTPTGTTVVKVTPDLKPTEASSSAFRLMPALGVSVAD
QKGKNTVASSEAKPAATIRIVQGLGVMPPKAGQTITVATHAKQGSSVASGSGTVHTSAVS
LPSMNAAVSKTVAVASGAASTPISIGAGASAVRQVPVSTTVVSTSQAGKLPTRITVPLSV
ISQPMKGKSVVTAPIIKGNLGANLGGLGRNIILTTMPAGTKLIAGNKPVSFLTAQQLQQL
QQQGQATQVRIQTVPASHLQQGTASGSSKAVSTVVVTTAPSPKQAPEQQ
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atggattccttggaccatatgctgacggatcccctggaactgggtccatgtggagatggc
catggcacacgtattatggaggactgcctcctggggggcaccagggttagtctgcctgag
gaccttctggaggatcccgaaatattctttgatgtagtcagcctctcaacatggcaggaa
gtattgagtgagtctcagcgtgaacacctccagcagtttctgcctcactttcctgaagac
agtctcgagcagcagaatcagctcgtcctagccctgttcagcggggagaacttccgcttt
gggaaccctctgcacattgcccagaagcttttccgagatggacactttaaccccgaggtg
gttaagtaccggcagctgtgcttcaagtcccagtacaagcgatacctcacctcccagcag
cagtatttccataggctgctgaagcagatcctggcttcccggaatgacctgctggagatg
gcccgacggagtggcccggcccttcccttccgccagaagcgcccttcaccatcccgcacc
cctgaggagcgggagtggcggacccagcagcgctacttgaaggtcttgagggaagtgaag
gaggagtgtggtgacacagacctgtcctctgatgaagaggccacgttggatttacaagaa
aaattttcttttgaagatctcagctcatggcttccgagctctccagcgcgttctcctagc
cctgcggtgcccctgagggtggtgcccacgctttcaaccacggatatgaaaactgcagat
aaaatagaactgggggacagtgacctgaagataatgttaaagaagcaccatgagaagcgg
aaacatcaaccagatcatccggaccttttgacaggggacctgaccctcaatgacatcatg
actcgagtaaatgctggcaggaagggctctctagcagccctatatgacttggctgtcctt
aaaaaaaaggttaaggaaaaagaggagaagaagaagaagaaaataaaactgatcaaatca
gaggcagaggacttggctgaacccttaagcagtgctgacgggatcccacctctctcacag
gccccttctccgctggctatacctgctatcaaggaggagcctcttgaagatctcaagcct
tgccttggaatcaatgaaatatcttccagtttcttctctttgctattagagatcttgttg
ctggaggggcaggctagccttcctatgctggaggaacgggttttggattggcagtcctct
ccagccagctccctcaatagctggttctctgcggcccccaactgggcagagttggtgtta
ccagccctgcagtatcttgctggagaaagtcgtgctgtaccttccagtttttctccgttt
gttgaattcaaagagaaaacccagcagtggaaattgcttggccagtcccaagataatgaa
aaggaattagctgcactcttccaactatggctagaaaccaaagaccaggctttctgtaag
caagaaaatgaagacagctcagatgccacaacacctgttcctcgggtaactgactatgtg
gtgcggcccagcacgggggaggagaaacgagtttttcaggaacaggagcgttacagatac
agccagccccataaggcattcacctttcgcatgcatggctttgagtctgtagtggggcct
gtgaagggtgtttttgacaaggaaacctcgctcaacaaggctcgggagcactccctgctg
cgctctgaccgtcctgcctacgttaccatcctgtctcttgttcgagatgctgcggcccgg
ctgcctaatggggaaggtaccagggccgagatttgtgagctgctcaaggactcccagttt
ctggcaccagatgtcaccagcactcaggtgaacacagtagtgagtggagccctggatcgg
ctgcattatgaaaaagacccatgtgtgaaatacgacattgggcgaaagctgtggatctac
ctgcatcgggaccggagcgaggaggaatttgagcggattcaccaagcacaagcagctgca
gctaaagccagaaaagcccttcagcaaaaacccaagcctccatccaaggtgaagtctggt
agcaaggagagttcattgaaagtcctcagcagtggcccttctgagcagagccagatgagc
ctcagtgactccagcatgcctcccactccagtcacacctgtgacccccaccactccggct
ctgcctgccactccgatctcccctcctcctgtgtcctcggtgaacaaaagtggccctact
cctgtctcagagccagcaaaatctagctcaggtgttcttctggtgtcttcacccacaatg
ccacagctaggaacaatgctctccccggcttccagccagactccaccaaattctcaggca
gctgcccgtgtggtgagccactctggctcggctggactgccccaggtgcgggtggtggcc
cagcctggccttcctactgctactcagcagtcagcagggccgactcagacactgccacag
atgccagcaggaccacagatgcgcgttccagccactgctactcagaccaaagttgtgcca
cagacagtaatggccaccgtgccggtcaaagctcagactgcagcggccactgtgcagcgg
cctggacctgggacagggctcacgatgacaagtctccctgccacagccagccctgcgagc
aagccagccaccagttctcccgggagctctgctccgagtgcttccacagctgctgtcatt
cagaatgtcacaggacagaacattatcaagcaggtggcaatcactgggcagcttggtgtg
aagccccaggcaggcagcagcattccactcacagccactaacttccgtatccagggtaag
gacgtattgcgtctgccaccctcttccatcaccacagatgccaaaggccagacggttctg
cgaatcactccggacatgatggccacgttggccaagtcccaggttaccacagtgaaactg
acccaggacctctttgggacgggaagcggcactgcgggcaaaggcatttctgccacctta
cacgtcacttctaatccagtccacgcgacggatagccctgccaaggccagttcggccagt
gccccttcgtccactccaacaggtaccaccgtggttaaagtgactcctgacctcaagcca
acagaagcctccagttcagcttttcgcttgatgccggcacttggtgtgagtgtggcagac
cagaaggggaaaaacacagtggcttcttcagaagcaaaaccagctgccacgatccgcatc
gtgcagggcctgggcgtgatgccccccaaagcaggccagaccatcacagttgcgacccat
gccaagcaagggtcctcagtggccagtgggtctggaactgtccatacttcagcggtgtcc
ttgcccagtatgaatgctgccgtgtccaagactgtggccgtggcctctggggctgcaagc
acccccatcagcatcggggcaggagcctctgctgtgcggcaggtccctgtcagcaccaca
gttgtttccacgtcccaggctgggaagctgcctacgcggatcacagttcctctctctgtt
attagccagcctatgaagggcaaaagtgtggtcacggcccccatcatcaaaggcaacctt
ggagccaacctcggcgggttgggccgcaatatcatcctgaccaccatgccagcggggact
aagctcattgccggcaacaagcccgttagtttcctcactgcccagcagttgcagcagctt
cagcagcaaggccaggccacacaggtgcgcatccagactgtccctgcatcccatcttcaa
cagggaacagcttctggttcctccaaagcagtctctactgttgttgtgaccacagctcca
tctcctaaacaggcacctgaacagcagtga
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