Leopardus geoffroyi (Geoffroy's cat): 123601198
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Entry
123601198 CDS
T10761
Symbol
TRIM41
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM41 isoform X1
KO
K12017
tripartite motif-containing protein 41 [EC:
2.3.2.27
]
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lgf04121
]
123601198 (TRIM41)
Enzymes [BR:
lgf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123601198 (TRIM41)
Ubiquitin system [BR:
lgf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
123601198 (TRIM41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_2
Apolipoprotein
zf-RING_5
DUF2730
zf-RING_6
Vts1
TRIM_CC
Motif
Other DBs
NCBI-GeneID:
123601198
NCBI-ProteinID:
XP_045340070
LinkDB
All DBs
Position
A1:89209105..89220509
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AA seq
656 aa
AA seq
DB search
MAAVAMTPNPVQTLQEEAVCAICLDYFTDPVSIGCGHNFCRVCVTQLWGGEDEEDRDELD
REEEEEDGEEEEVEAVGAGGGWDTPMRDEDYEGDMEEEVEEEEEGVFWTSGMGGSNWDNM
DYVWEEEDEEEDLDYYLGDMEEDLRGEDEEDEEEVLEEDEEEELDPVTPLPPPPAPRRCF
TCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRGNEQGICPKHQEALKLFCEVD
EEAICVVCRESRSHKQHSVVPLEEVVQEYKNHSSCATTTAFCTLLWAKLQGHVEPLRKHL
EAVQKMKAKEERRVTELKVVSTIPFASSQSQMKSELAAVASEFGRLTRFLAEEQAGLERR
LREMHEAQLGRAGAAASRLAEQAAQLSRLLAEAQERSQQGGLRLLQDIKETFNRCEEVQL
QPPEVWSPDPCQPHSHDFLTDAIVRKMSRMFCQAARVDLTLDPDTAHPALMLSPDRRGVR
LAERRQEVADHSKRFSADCCVLGAQGFRSGRHYWEVEVGGRRGWAVGAARESTHHKEKVG
SGGSSLGSGDASSSRHHHRRRRLHLPQQPLLQREVWCVGTNGKRYQAQSSTEQTLLSPSE
KPRRFGVYLDYEAGRLGFYNAETLAHVHTFSAAFLGERVFPFFRVLSKGTRIKLCP
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgttgccatgacacccaaccctgtgcagacccttcaggaggaggcggtgtgc
gccatctgcctcgattacttcacggaccccgtgtccatcggctgcgggcacaacttctgc
cgagtgtgtgtaacccagttgtggggaggggaagatgaggaggacagagacgagttagac
cgggaagaggaagaggaggacggagaggaggaggaggtggaggctgtgggggccggtgga
gggtgggacacccccatgagggatgaagactatgagggcgacatggaggaggaggtcgag
gaggaagaggagggtgtgttctggaccagtggcatgggcgggtccaactgggacaacatg
gactatgtgtgggaggaggaggacgaggaggaagatttggactactacttgggggacatg
gaggaggacctgagaggggaggatgaggaggacgaggaggaagtgctggaggaggacgag
gaagaggagttagaccccgtcaccccactgcccccgcctccagcccctcggaggtgcttc
acctgcccccagtgccgaaagagctttcccaggcggagcttccgccccaacctgcagctg
gccaacatggtccaggtgattcgacagatgcacccaactcctggtcgagggagccgtggg
aacgagcagggcatttgtcccaaacaccaggaagccctgaagctcttctgcgaggtggat
gaagaggccatatgtgtggtgtgtcgagaatccaggagccacaaacagcacagcgtggtg
ccattggaggaggtggtgcaggagtacaagaaccactcatcctgtgcaacaaccactgcc
ttttgtactcttctctgggccaaactgcaggggcatgtggaaccactgaggaagcatcta
gaggctgtgcagaagatgaaggccaaggaggagaggcgggtgacagaactgaaggtggta
tccaccatcccctttgcatcatcccagagccagatgaagtcagagctggcagctgtggcc
tcggagttcgggcggctgacacggtttctggctgaagagcaggcagggttggagcggcgc
ctccgagagatgcacgaagcccagctagggcgtgcaggagcagcggccagccgcctggcg
gagcaggctgcccagctgagccgcctgctggcggaggcccaggagcggagccagcagggg
ggcctgcggctgctccaggacatcaaggagactttcaataggtgtgaagaggtacagctg
caacccccagaggtctggtcccctgacccgtgtcagccccatagccatgacttcttgaca
gatgccatcgtgaggaaaatgagccggatgttctgtcaggctgcccgagtggacctgacg
ctggaccctgacacggctcaccccgccctgatgctctcccctgaccgccggggggtccgc
ctggcagagcggcggcaggaggttgctgaccattccaagcgcttctcagccgactgctgc
gtattgggggcccaaggcttccgctctgggcggcactactgggaggtagaggtgggaggg
cggcggggttgggcggtgggcgctgcccgtgaatcgacccatcataaggagaaggtgggc
tctgggggatcctctttgggcagtggggatgccagctcctcacgccatcaccatcgccgc
cgccggctccacctaccccaacagcccctgctccagcgcgaagtgtggtgtgtgggcacc
aatggcaaacgctaccaggcacagagctcaacggagcagacactgctgagcccaagtgag
aaaccacggcgctttggcgtgtacctggactatgaggctgggcgcctaggcttctacaat
gcggagactctagcccacgtgcataccttctcagctgctttcctgggcgagcgtgtcttc
cctttctttcgagtgctctccaagggtactcgtatcaagctatgcccttga
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