KEGG   Leopardus geoffroyi (Geoffroy's cat): 123601655
Entry
123601655         CDS       T10761                                 
Symbol
DDB2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
  KO
K10140  DNA damage-binding protein 2
Organism
lgf  Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03420  Nucleotide excision repair
lgf04115  p53 signaling pathway
lgf04120  Ubiquitin mediated proteolysis
lgf05161  Hepatitis B
lgf05169  Epstein-Barr virus infection
lgf05200  Pathways in cancer
lgf05202  Transcriptional misregulation in cancer
lgf05210  Colorectal cancer
lgf05212  Pancreatic cancer
lgf05213  Endometrial cancer
lgf05214  Glioma
lgf05216  Thyroid cancer
lgf05217  Basal cell carcinoma
lgf05218  Melanoma
lgf05220  Chronic myeloid leukemia
lgf05222  Small cell lung cancer
lgf05223  Non-small cell lung cancer
lgf05224  Breast cancer
lgf05225  Hepatocellular carcinoma
lgf05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:lgf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    123601655 (DDB2)
  09124 Replication and repair
   03420 Nucleotide excision repair
    123601655 (DDB2)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    123601655 (DDB2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    123601655 (DDB2)
   05202 Transcriptional misregulation in cancer
    123601655 (DDB2)
  09162 Cancer: specific types
   05210 Colorectal cancer
    123601655 (DDB2)
   05212 Pancreatic cancer
    123601655 (DDB2)
   05225 Hepatocellular carcinoma
    123601655 (DDB2)
   05226 Gastric cancer
    123601655 (DDB2)
   05214 Glioma
    123601655 (DDB2)
   05216 Thyroid cancer
    123601655 (DDB2)
   05220 Chronic myeloid leukemia
    123601655 (DDB2)
   05217 Basal cell carcinoma
    123601655 (DDB2)
   05218 Melanoma
    123601655 (DDB2)
   05213 Endometrial cancer
    123601655 (DDB2)
   05224 Breast cancer
    123601655 (DDB2)
   05222 Small cell lung cancer
    123601655 (DDB2)
   05223 Non-small cell lung cancer
    123601655 (DDB2)
  09172 Infectious disease: viral
   05161 Hepatitis B
    123601655 (DDB2)
   05169 Epstein-Barr virus infection
    123601655 (DDB2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lgf04121]
    123601655 (DDB2)
   03400 DNA repair and recombination proteins [BR:lgf03400]
    123601655 (DDB2)
Ubiquitin system [BR:lgf04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     123601655 (DDB2)
DNA repair and recombination proteins [BR:lgf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      123601655 (DDB2)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 WD40_Prp19 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR75_1st WDR55 Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_WDR3_2nd WD40_RFWD3 WD40_Gbeta Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_Vps41 WD_LRWD1 Beta-prop_WDR35_TULP_N Beta-prop_ACSF4 EF-hand_1
Other DBs
NCBI-GeneID: 123601655
NCBI-ProteinID: XP_045341108
LinkDB
Position
D1:99481284..99502589
AA seq 456 aa
MAPRKRPETQKTPEVVVRPKSRRSRSPRELEPEAKKLCVKGPGSSRRFDSGCLWAGLASL
QVPPSYTNIVRALHHHKLGKAAWPSLQQGLQQSFVHSLASYRIFQKAAPFDRRATSLAWH
PTHPSTLAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSVTGLKFNPLDTNQFFTSSMEGT
TRLQDFKGNTLRVFTSSDTCNIWFCSLDVSARSRMVVTGDNVGHVILLNMDGRELWNLRM
HKKKVTHVALNPCCDWLLATASVDQTVKIWDLRQVKGKSSCLHSLLHSHPVNAACFSPDG
AQLLTTDQKSELRVYSASQWDCPPSLIPHPHRHFQHLTPIKPSLSPCCSALKLQFLLTSA
LLMTSPVSAPKATWHPRYNLIVVGRYPDPNFKSCTPHELRTIDVFDGSSGKMMYQLYDPE
SSGIISLNEFNPMGDTLASVMGYHILIWSQEAGMRK
NT seq 1371 nt   +upstreamnt  +downstreamnt
atggctcccaggaaacgcccagaaacccagaagacccccgaggtggttgtgcgccccaag
agcaggaggagcagaagcccccgggagctggagcccgaggccaagaagctctgtgtgaag
ggccccggttctagcagaagatttgactcaggctgcctttgggcggggttggctagcctt
caggtcccgccatcatacaccaacatcgtcagggcccttcaccaccataagctgggcaaa
gctgcctggccatcactacagcagggtctccagcagtcctttgtgcactctctggcttct
taccggatattccaaaaggctgccccttttgacaggagggccacatccttggcatggcac
ccaactcaccccagcaccctggctgtgggttccaaagggggagatatcatgctctggaac
tttggcataaaggacaaacccaccttcattaaagggattggagctggagggagcgtcact
gggctgaagtttaaccctcttgataccaaccagtttttcacctcctcaatggagggaaca
actaggctgcaagactttaaaggcaacacgctccgagtgtttaccagctcagacacctgc
aacatctggttttgcagcctggatgtgtctgccagaagccgaatggtggtcacaggcgac
aatgtgggacatgtgatcctgctgaacatggacggcagggagctttggaatctgagaatg
cacaaaaagaaagtgacccatgtggctctgaacccatgctgtgattggctcctggccaca
gcctctgtggaccaaactgtgaaaatctgggacctgcgccaggttaaagggaaatccagc
tgcctccactcgctgctgcatagccatcctgtcaacgcagcttgtttcagtcctgacgga
gcccagctcctgaccactgaccagaagagtgagctccgggtttactcggcctcccagtgg
gactgccccccgagcctgatcccacaccctcaccgccacttccagcacctgacgcccatc
aagcccagcctatctccctgctgttctgccctcaaacttcagttcctgctgacctcagcc
ttgctaatgacttctccagtctcagcccccaaggcaacctggcatcctcggtacaacctc
attgttgtgggccgatacccagatcctaatttcaaaagttgtaccccccatgaattaagg
accattgatgtgtttgatggaagctcagggaagatgatgtatcagctctatgacccagaa
tcttctggtatcatttcgctcaatgagttcaatcccatgggggacacgctggcctctgtg
atgggttatcacattctcatttggagccaggaagctgggatgcggaaatga

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