KEGG   Leopardus geoffroyi (Geoffroy's cat): 123601783
Entry
123601783         CDS       T10761                                 
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
lgf  Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03420  Nucleotide excision repair
lgf04120  Ubiquitin mediated proteolysis
lgf05161  Hepatitis B
lgf05170  Human immunodeficiency virus 1 infection
lgf05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:lgf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    123601783 (DDB1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    123601783 (DDB1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    123601783 (DDB1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    123601783 (DDB1)
   05161 Hepatitis B
    123601783 (DDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lgf04121]
    123601783 (DDB1)
   03400 DNA repair and recombination proteins [BR:lgf03400]
    123601783 (DDB1)
Ubiquitin system [BR:lgf04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     123601783 (DDB1)
DNA repair and recombination proteins [BR:lgf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      123601783 (DDB1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      123601783 (DDB1)
SSDB
Motif
Pfam: CPSF_A Beta-prop_RSE1_1st Beta-prop_RSE1_2nd Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 123601783
NCBI-ProteinID: XP_045341399
LinkDB
Position
D1:complement(105503151..105532724)
AA seq 1193 aa
MPCAPAALACNVSLGRRQRHWSSPRAGGGPCLFACVHFSIVALECRRAAPDLDMSYNYVV
TAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELF
RPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPE
CRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQG
RHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLA
IAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE
TSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDL
ERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPSRETDDTLVL
SFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALV
SEWKEPQGKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLG
DSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALG
DGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLV
FSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQ
EVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVE
VHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGR
IVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYN
NIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLG
AENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGS
VLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATG
FIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH
NT seq 3582 nt   +upstreamnt  +downstreamnt
atgccctgcgccccggccgctctggcctgcaacgtgtctctggggcggaggcagcggcat
tggagttcgccgcgcgcgggtgggggcccctgtctcttcgcctgtgtccatttctctatc
gttgcgctcgagtgccgacgggccgccccagacctcgacatgtcgtacaactacgtggta
acggcacagaagcccaccgccgtgaacggctgcgtgaccggacactttacatcagccgaa
gacctgaacctgttgattgccaaaaacacgagattagagatctatgtggtcactgctgag
gggcttcggcccgtcaaagaggtgggcatgtatgggaagattgctgtcatggagcttttc
aggcccaagggggagagcaaggacctcctgtttatcctgacagctaagtacaatgcctgc
atcctggagtacaagcagagcggcgagagcattgatatcataacacgagcccatggcaac
gtccaggaccgtattggccgcccctcagagactggcatcattggcattattgaccccgag
tgccgcatgattggcctgcgactctatgatggccttttcaaggtcattccgctagaccgg
gacaataaagagctcaaggcctttaacatccgcctcgaggagttgcatgtcatcgacgtc
aagttcttatatggttgccaagcacctaccatctgctttgtctaccaggaccctcagggg
cggcatgtgaaaacctatgaggtgtctcttcgagagaaggagttcaataagggcccttgg
aaacaggaaaacgtagaagctgaggcttccatggtgattgcagtcccagagccctttgga
ggggccatcatcattggacaggagtcgatcacctatcacaacggtgacaaatacctggcg
attgcccctcctatcatcaagcaaagcacgatcgtgtgtcacaatcgtgtggaccccaat
ggttcccgctatctgctgggagacatggaaggacggctctttatgctgctcttggagaag
gaggagcagatggacggcaccgtcaccctcaaagatctccgcgtggagctccttggagag
acctctatcgccgaatgcttgacatacctcgataatggtgttgtgttcgttgggtctcgc
ctcggtgactcccagcttgtgaagctcaatgttgacagcaacgaacaaggctcctatgta
gtggccatggaaacctttactaatttgggacccattgtggacatgtgcgtggtggacctg
gagagacaggggcagggacagctggttacttgctctggggctttcaaggaaggttccttg
cggatcatccgaaatggaattggaatccacgagcatgccagcattgacttaccaggcatc
aaaggtctgtggccgctgcggtctgatcctagccgggagactgacgacactctggtgctc
tcttttgtgggccagacaagagttctcatgttgaacggagaggaggtggaggaaaccgaa
ctgatgggtttcgtggatgatcagcagactttcttctgtggcaacgtggctcatcagcaa
cttatccagatcacgtcagcatctgtgaggttggtctctcaagagcccaaagctctggtc
agtgagtggaaggagcctcagggcaagaacatcagcgtggcctcctgcaacagcagccag
gtggtggtggccgtgggaagggccctctactacctgcagatccaccctcaggagctccgg
cagatcagccacacggagatggaacacgaagtggcctgcttggacatcaccccactgggg
gacagcaacgggctgtcccctctttgtgccattggcctgtggacagacatctctgcacgt
atcttgaagctgccctcttttgagctactgcacaaagagatgctgggtggagagatcatt
cctcgttccatcctgatgaccacttttgagagcagccactacctcctttgtgccttggga
gacggggcacttttctacttcgggctcaacattgagacgggcctgttgagcgatcggaag
aaggtgactctgggcacccagcccacggtattgaggactttccgttctctctctaccacc
aacgtctttgcttgctctgaccgccccactgtcatctacagcagcaaccacaaattggtc
ttctccaatgtcaacctcaaggaagtcaactacatgtgtcccctcaactctgatggctat
cctgacagcctggcactggccaacaatagcaccctcaccattggcaccatcgacgagatc
cagaagctgcacattcgcacggtccccctctacgagtcccccaggaagatctgctatcag
gaagtgtcccagtgcttcggggtcctttctagccggattgaagtccaggacacgagtggg
ggcacaacggctctgaggcccagtgccagcacccaggccctgtccagcagcgtcagctcc
agcaagctgttctccagcagcacagcgcctcacgagacctcctttggagaagaggtggag
gtgcacaacctcctcatcatcgaccagcacaccttcgaagtgcttcatgcccaccagttt
ctgcagaacgagtatgccctcagcctggtctcctgcaagctgggcaaagaccccaacacg
tacttcatcgtgggcacggccatggtgtatcccgaagaggcagagcccaagcagggtcgg
atcgtggtctttcagtattccgacggaaaactacagactgtggctgagaaggaagtgaaa
ggggccgtgtactccatggtggaattcaacgggaagctgttagccagcatcaatagcacg
gtgcggctttatgagtggacaacagagaaggagcttcgcaccgagtgcaatcactacaac
aacatcatggccctctacctgaagaccaagggcgacttcatcctggtgggcgacctgatg
cgctcagtgctgctgcttgcctacaagcccatggaggggaactttgaagagattgctcga
gacttcaatcctaactggatgagtgctgtcgaaatcttggatgacgacaatttcctgggg
gctgaaaatgcttttaacttgtttgtgtgtcagaaggatagcgctgccactaccgacgag
gagcgccagcacctccaggaggtcggtctcttccacctgggcgagttcgtcaacgtcttc
tgccacggctctctggtcatgcagaacctgggcgagacttccacgcccacacagggctcg
gtgctcttcggcacagtcaacggcatgattgggctggtgacctcgctgtccgagagctgg
tacaacctgctgttggacatgcagaatcgactcaataaagtcatcaaaagtgtgggcaag
atcgagcactctttctggagatcctttcatactgagcgaaagacagaaccggccacaggc
ttcattgatggagacttgattgagagtttcctagacatcagcaggcccaagatgcaggag
gtcgtggcaaacctacagtacgatgatggcagcggaatgaagcgagaggccaccgccgac
gacctgatcaaggttgtggaggagctgacgcggatccattag

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