Leopardus geoffroyi (Geoffroy's cat): 123602130
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Entry
123602130 CDS
T10761
Symbol
DEAF1
Name
(RefSeq) deformed epidermal autoregulatory factor 1 homolog isoform X1
KO
K23041
deformed epidermal autoregulatory factor 1
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lgf03000
]
123602130 (DEAF1)
03019 Messenger RNA biogenesis [BR:
lgf03019
]
123602130 (DEAF1)
Transcription factors [BR:
lgf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
SAND domain-containing proteins
123602130 (DEAF1)
Messenger RNA biogenesis [BR:
lgf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
123602130 (DEAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAND
zf-MYND
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
123602130
NCBI-ProteinID:
XP_045342383
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Position
D1:115262796..115287031
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AA seq
565 aa
AA seq
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MEDSDSAAKQLGLAEAAAVAAAAAVAAAAAAAAGGEAEEPVLSRDEDSEEDGDSEAERET
RRVTAVAVMAAESGHMDMGAEALPGPDEAAAAAAFAEVTTVTVANVGASADNVFTTSVAN
AASLSGHVLSGRTALQIGDSLNTEKATLIVVHTDGSIVETAGLKGPAAPLTPGPQCPPTP
AAPGQERGGTKYNWDPSVYDSELPVRCRNISGTLFKSRLGSGGRGRCIKQGENWYSPTEF
EAMAGRASSKDWKRSIRYAGRPLQCLIQDGILNPHAASCTCAACCDDMTLSGPVRLFVPY
KRRKKENEPPATPVKKEPPKNITLLPATAATAFTVTPSGQITTSGALTFDRASTVEATAV
ISESPAQGDVFAGATVQEAGVQPPCRVGHPEPHYPGYQDSCQIAPFPEAALPTSHPKIVL
TSLPALAIPPSTPTKAVSPSVVSGLEMSEPRNWLYLEEMVNSLLSTAQQLKTLFEQAKQA
SSYREAAAAQARVQADADRKEQSCVNCGREALSECTGCHKVNYCSTFCQRKDWKDHQHVC
GQSAAVTVQADEVHVTDSVMEKVTV
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggaggactcggactcggccgccaagcagctgggcctggccgaggcggcagcggtggcg
gccgcggccgctgttgcggcggcggccgcggccgcggcaggaggcgaggcggaggagccg
gtgctcagcagggacgaggactcggaggaggacggagactcggaggcagagcgcgagact
cggcgggtgacggccgtggcggtgatggccgccgagtccgggcacatggacatgggtgcc
gaggccctgccgggtcccgacgaggccgccgcggccgcagccttcgcagaggtgaccact
gtgaccgtggccaacgtgggtgcctctgcagacaacgtcttcaccacgtcggtggcaaat
gccgcctcactctcgggacacgtcctgtctggcaggacagccctgcagatcggggacagc
ctgaacacagagaaggccacgctgattgttgtgcacacggacgggagcatcgtggagacg
gcggggctgaaggggccagctgcacccctcactccaggccctcagtgccctccgactcct
gcggctcccggccaggagcgaggcggaaccaaatataactgggacccctcggtgtacgac
agcgagctgcccgtgcgctgccggaacatcagcggcacgctgttcaagagcaggctcggc
tcaggcggccggggccgatgcatcaagcagggggagaactggtacagcccgactgagttc
gaagccatggccgggagagccagcagtaaggactggaagaggagcatccgctacgcgggc
aggccgcttcagtgcctcattcaggacgggatcttaaatcctcacgctgcctcatgcacc
tgtgccgcctgctgtgacgacatgaccctgagcggcccagtcaggctcttcgtcccctac
aaaaggcgcaagaaggagaatgagccgcctgcgacccccgtgaagaaggagccccccaag
aacatcacgctgcttcccgccaccgccgccaccgccttcaccgtgaccccctcaggacag
atcactacctcgggcgcactgacctttgaccgggcgtccaccgtggaggccaccgccgtc
atctcagagagcccggcccagggcgatgtcttcgcgggagccacggtgcaagaggcaggc
gtgcagcccccgtgcagagtcggccacccggagccacactacccagggtatcaggacagc
tgccagatcgcacccttcccggaagcagcactgccaacgtctcatcccaagatagtgttg
acctccctgccggccttggccatcccaccctccacccccaccaaagccgtctccccctcg
gtggtcagcgggctggagatgtcggagcctcggaactggctgtacctggaagagatggtc
aactccctgctcagcacggcccagcaactgaagacactgttcgaacaagccaagcaggcc
agctcctacagagaagccgccgcggcccaggccagagtccaggcggacgcagatcgcaag
gagcagtcttgtgtgaactgtggccgcgaggccctgagcgagtgcaccggctgccacaaa
gtcaactactgctcgaccttctgccagcgcaaggactggaaggaccaccagcacgtgtgt
ggccagtcggcggctgtcaccgtccaggcggacgaagtccacgtcactgacagcgtgatg
gagaaagtcaccgtgtaa
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