Leopardus geoffroyi (Geoffroy's cat): 123602275
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Entry
123602275 CDS
T10761
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04136
Autophagy - other
lgf04140
Autophagy - animal
lgf04211
Longevity regulating pathway
lgf05010
Alzheimer disease
lgf05014
Amyotrophic lateral sclerosis
lgf05016
Huntington disease
lgf05017
Spinocerebellar ataxia
lgf05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123602275 (ATG13)
04136 Autophagy - other
123602275 (ATG13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
123602275 (ATG13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
123602275 (ATG13)
05014 Amyotrophic lateral sclerosis
123602275 (ATG13)
05016 Huntington disease
123602275 (ATG13)
05017 Spinocerebellar ataxia
123602275 (ATG13)
05022 Pathways of neurodegeneration - multiple diseases
123602275 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lgf04131
]
123602275 (ATG13)
03029 Mitochondrial biogenesis [BR:
lgf03029
]
123602275 (ATG13)
Membrane trafficking [BR:
lgf04131
]
Autophagy
Autophagosome formation proteins
ULK complex
123602275 (ATG13)
Atg1 complex
123602275 (ATG13)
Mitochondrial biogenesis [BR:
lgf03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
123602275 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
123602275
NCBI-ProteinID:
XP_045342677
LinkDB
All DBs
Position
D1:98958478..99012516
Genome browser
AA seq
550 aa
AA seq
DB search
METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLNGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGG
TYPSVEDSQEVCTTSFSTSPPSQCVFTVTKAHFQTPTPVVTDTLRVPMAGLAFSHQLSSS
RLSYQPAALGVGSADLAYPVVFAAGLNATHPHQLMVPGKEGGVPLAPNQPAHGAQADQER
LATYTPSDGARCAATPSSSEDTETVSNSSEGRASPHDVLETIFVRKVGAFVNKPINQVTL
TSLDIPFAMFAPKNLELEDADPMVNPPDSPETESPLQGSLHSDGSSGGSSGNTHDDFVMI
DFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVR
EFDAFVETLQ
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatctcaattcccaggacagaaaggacctggacaagtttattaaatttttt
gccctcaagactgtccaagtgattgtccaggctcgacttggtgagaagatttgtactcgt
tcatcttcatccccgacgggttcagactggttcaatttagcaatcaaagatatcccagag
gttacacatgaagcaaaaaaggccctggcaggacagctgcctgccgttgggagatcgatg
tgtgtggagatctcactcaagacttctgagggcgattccatggagctagaaatttggtgt
cttgaaatgaatgaaaagtgtgataaagagattaaagtttcctacacggtgtacaacaga
ctgtcactgctgctgaagtccctccttgccataactagggtcacaccggcttacagactc
tccagaaaacaggggcatgaatatgtcatattgtacaggatatattttggggaagttcag
ctgaatggtttaggagaaggtttccagacagtgcgtgttgggacagtaggcacccctgtg
ggcaccatcactctttcttgtgcttacagaattaacttggcatttatgtctaccaggcaa
tttgagaggaccccacctatcatggggattatcattgatcactttgtggaccgtccgtat
cccagctcctcacctatgcacccctgcaattacagaactgctggtgaggacactggagga
acatatccttctgtggaagattctcaagaagtgtgtaccacctctttctccacctcccct
ccttcccagtgtgtgtttactgtcacaaaggcacattttcagacccctactcctgtggtg
acggacactctgagggtccccatggcaggactggccttttcccatcaactctcaagctct
cgcctttcctatcagcctgctgccctgggcgttggatcagctgacctggcttacccagta
gtgtttgctgctggcttaaacgccacacaccctcaccagctcatggttcctgggaaggaa
ggtggggtacccctcgctcccaaccagcctgcacacggtgctcaggccgaccaggagaga
ttggcgacctacaccccttctgatggggcccgctgtgctgccacaccttccagcagcgag
gatactgaaactgtatcaaacagcagtgagggccgggcttccccccatgatgtcttggaa
accatctttgtccgaaaagtgggggcttttgtcaacaagcccatcaaccaggtgaccctg
accagtttggacataccctttgccatgtttgctcccaagaatttggagttggaggatgcc
gatcccatggtgaatcctccagattccccagagactgaatctcctctccagggcagcctg
cactctgatggctccagtgggggtagcagtggcaatacccacgatgactttgttatgatc
gacttcaaaccggctttttctaaagatgacattcttccgatggatttggggaccttctat
cgtgaatttcaaaatccccctcagctgagcagcctctccatagatatcggggcacagtcc
atggctgaagacttggactcactaccagagaagctggctgtgcacgagaagaatgtccga
gaatttgatgcctttgtagaaactctgcagtaa
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integrated database retrieval system
