Leopardus geoffroyi (Geoffroy's cat): 123602930
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Entry
123602930 CDS
T10761
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 10-like
KO
K05652
ATP-binding cassette, subfamily A (ABC1), member 10
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
123602930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lgf02000
]
123602930
Transporters [BR:
lgf02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
123602930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC2_membrane_3
R1_ABCA1
AAA_15
RsgA_GTPase
AAA_29
MMR_HSR1
Dynamin_N
SMC_N
DUF6456
AAA_23
Motif
Other DBs
NCBI-GeneID:
123602930
NCBI-ProteinID:
XP_045343202
LinkDB
All DBs
Position
E1:complement(50229503..50296395)
Genome browser
AA seq
1689 aa
AA seq
DB search
MIKKKISVYQQTQALLYKNFLKKWRMKKESLSEWKITLLLGLYFCIFSGLFRATHLPEQP
PHVLGRVDEFNDSDLVVAYTPVTNMTQRIIDKMPSASFMKGRKTIGVADKEMMDTVLLES
HHEMEGVVFNDTFSYQLKLNWAYGLSIAEEHSEYSEHCWDMHDDIFCYVTRYWQNGSVAF
QTAINAAIIEVSAKLKRSALYLRYFLSALYLQYIFSISLSSSASPPHSEGIVLCFLFPEK
KKLTDGNIPNFPTQSLFNYRPATHDTHPFPSTSSLMSFLNSQAESCSFQHYQEGCSMGFP
FCLLFLQLPPFYSELTTRFYRRLSWGLMYAGFVFILSFAMALIITLSKTVVIVGFLVIVT
LFVLYGLSLIALAFLLSVLIKKPVLTGLVGFLFTTFWGCLGFTVLYRQLPSSLGWILSLF
SPFAFTAGMVQISHMGYYLMGVTFPDPSGESHVMMVTFFILALDALFYLILMLYFEQALP
DEGGHPCSPLFFLKSSFWSQHRNTHHEVFEDEINPEHYPDDSFEPVPLEFHGKEAIRIRN
IRKEYDGKPENVEALQGIFLDIYEGLVTAILGHNGAGKSTLLNILSGLSVPTKGSATIYN
TQLSEITNMEETRMNIGFCLQFNIQFDFLTVRENLRLFAKIKGIQSKEVEQEVKRVIMEL
DIQNTQDIIAKKLTGGQKRKLTLGIALLGDPQVLLLDEPTTGLDPFSKHQVWNLLKERKT
NRVILFSTQIMDEADILADRKVFLSNGKLKCAGSSLFLKQKWGIGYHLSLHRNEMCNLES
ITSLIRRHVPDAKLRAESEEKLVYLLPLERTNKFPDLYRDLEKCSNQGIMNYDVSMTTLN
EVFLNLEGKSTIDEPDVGIWKQEKVNETRDAGTESEMQQAPCSLPGLRKAISTRTLWRRQ
VCAMARLRFLKLRHERKLLLSLLLLLGIPLIPTIFVKIVVALSHSTHCRELSSSMYFLSV
EQPSQTPLTSLLVINNTGSNIEDFMQALKRQDILLEVDDFRNRNGSDDPSYNGAIIVSGD
WRDYRFSVACNTKRMTCFPVLMGIVSNALLGIFNFTELIKTERSTFPFNGILVEFGFVNG
PLFLLVLANCLSPYIGMSSLSDRKVRGGSQLRISGLCPSAYWIGQALVDIPLYCSILLSV
YLIHCLTVLEVRFPLVLMFALVVCIVGCAASLIFFTXVISFIFRKRRKNNGLWCLGFLII
SIFLLIIQSSAKPEDPSLILCMISIPFYTLIRFFILFMEVFYVYVRNSESVNDEIKEGNQ
SILLTILIPYLQSIIFLFVIKCLEMKYGQKTMRKEPVFRISRSRENHPNPEEPEEEDENG
QAARARTANALTTLNPDEKPLVVASCLHKAYKEKKEHCFSTRKKKIAIRNISFCINKGEV
LGLLGHNGAGKSTSIKMVTGDTKPTAGTVVLEGYRTSPRQPEDDTVKFLGYCPQENSLWP
GLTGKDHLELXAAVKGMSKQEAALSTSRLVEAFKLXEQLKVPVKDLPQEGKRKLCFALSI
LGDPSVVLLDEPSTGVDPEGQQQMWQAIQTIVKNTEKGVLLTTHSMAEAEAVCDRVAIMV
SGKLRCIGSIQNLKSKFGKDYILEVKIKDPTQVEPVHTEILKLFPQAAWQERYSSMMAYK
LPVEAVRPLSQAFFKLEAVKQTFDLEEYSLSQATLEQVFLELSKEQELGNLDDEVDTTVR
WKLLAQEEP
NT seq
5070 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaaaaaagataagcgtgtatcaacaaactcaggcccttttatacaagaatttc
cttaaaaaatggagaatgaaaaaagagagcttatcggaatggaaaataacattgcttctt
gggctatatttttgcatcttttcgggactcttcagagcgacccatcttcctgaacagcct
cctcatgtcctgggacgtgtggatgaatttaatgactctgatctggtggtggcatatacc
ccagtcactaacatgacacagaggataatcgataagatgccttcagcttcgtttatgaaa
ggaagaaaaaccattggggttgctgataaagaaatgatggatacggtacttttagaaagc
catcatgaaatggagggagttgtgtttaacgatactttttcgtatcagctgaagttgaat
tgggcatatggactttcaattgcagaagaacactctgaatactcagaacactgttgggat
atgcatgatgacattttttgttatgtgacaagatactggcaaaatgggtctgtggctttt
caaactgcgattaatgctgcaattatagaagtaagtgccaaacttaagcgatctgcttta
tatcttcggtattttctatctgctttatatcttcagtatatcttcagtatttccctgtct
tcttctgcctcgcccccacactctgaggggattgttctctgcttcttattcccagagaaa
aagaagctgacggatggaaatatccccaacttcccgacgcaaagcctgttcaactacaga
cccgctactcacgacacccatccttttccttctacctcctctctaatgtctttcctcaat
tcacaggctgaatcctgttccttccaacattatcaggaaggttgctcaatgggttttccc
ttctgtctcctctttcttcaacttccccctttctattctgaactaacaactcgtttctac
cgtaggctctcctggggattaatgtatgcaggcttcgtatttatcctgtcctttgctatg
gctctgatcataacactgagcaaaactgtagtgattgttggcttcctggtgatcgtcaca
ctctttgtcctatatggcctgtccttgatagcattggctttcctcctgagcgtgttgata
aagaaacctgtccttaccggtttggtcgggtttctcttcactacattttggggatgtctg
ggattcactgtattgtacagacaacttccttcatctctgggatggatcttaagtcttttt
agcccctttgccttcactgccggaatggttcagatttcacacatgggttattacctgatg
ggcgttacttttcctgatccgtctggagagtcacacgtaatgatggttactttcttcatt
ttggcacttgacgctcttttctatctgatactaatgttatattttgagcaagctttgcct
gatgaaggtggccacccgtgttcaccactgtttttcctaaagtcttcattttggtcccaa
catcgaaacacccatcatgaagtctttgaggacgaaatcaatcccgagcattaccctgat
gactcttttgaaccggtgcctctggagttccatggaaaagaagccataagaatcagaaat
attagaaaagaatacgatggaaagcctgaaaacgtagaagcattgcaaggcatatttctt
gacatatatgaaggactagtgaccgcaatccttggacataacggcgctggtaaatcgaca
ctgctgaacattcttagtgggttgtctgttcctacgaaaggatcagccactatttataat
acccaactctctgaaataacaaacatggaagaaactagaatgaacattggattttgtcta
caattcaatattcaatttgactttctgactgtgagagaaaacctcaggctatttgctaaa
ataaaagggattcagtccaaggaagtggaacaagaggtgaaaagagtcataatggaattg
gacatacaaaacacgcaagacattattgctaaaaaattgactggtggacaaaagagaaaa
ctgacacttgggattgcccttttaggagatcctcaggttttgctgctggatgagccaact
actggactggatcctttttcaaagcaccaagtttggaacctcctcaaggagcggaaaaca
aaccgtgtgatcctttttagtacccagattatggatgaggctgacatcttggctgatagg
aaagtgtttctgtctaatgggaagttgaaatgtgcagggtcatctttgtttctgaagcaa
aaatggggtattggatatcatttaagtttacacaggaatgaaatgtgtaatctggagagc
atcacatccctcatcaggcggcacgtccctgatgccaagttaagagcagaaagtgaagaa
aaacttgtgtatcttttgcccttggaaagaacaaacaagtttccagatctttacagggat
cttgaaaagtgttctaatcagggcataatgaattatgatgtttccatgacaactctgaat
gaagtcttcttgaatctagaaggcaaatcaacaattgatgagccagatgttggcatttgg
aaacaggagaaagtcaatgagacaagggatgctggaactgagtctgaaatgcaacaggct
ccttgctctcttcctggattgagaaaggccatcagtaccagaactctctggagacgacag
gtgtgtgcaatggcaaggcttcgcttcttaaagttaaggcatgagaggaaacttcttttg
tccttgttactgttacttggtattcctttaatccctaccatttttgtgaagatagtggtt
gcgttatctcattccactcattgtcgggagctctcatccagtatgtattttctttctgtg
gaacaaccctcacagactcctcttaccagtctattggtcatcaacaatacaggatcaaat
attgaagactttatgcaggcactgaagcgtcaggatatacttctggaagtagatgatttt
agaaatagaaatggctccgatgatccttcctacaatggagccatcatagtgtccggtgac
tggagggattacagattttcagttgcgtgtaataccaagagaatgacttgttttcctgtt
cttatgggaattgttagcaatgcccttcttggaatttttaactttactgaacttatcaaa
acagagagaagcacatttccttttaatggcatcttagtggaatttggttttgtgaatggc
cctttatttttgttggtccttgcaaactgcctttctccttacattggcatgagcagcctc
agcgatcgcaaagtaagagggggttctcagttacggatttcaggcctgtgtccttcggca
tactggattggacaggctctggtggacattccattatactgctcgattcttctttcagtg
tatttaattcactgcctcacggttttggaagtcagattcccactggtgctcatgtttgct
cttgtggtttgcatagttggttgtgcagcttctcttatattcttcacgtaggtgatttca
ttcatctttcgcaagagaagaaaaaataatggcctttggtgtctcgggtttcttattatt
tcaatatttttactcatcatccaatcatcagccaaacctgaagaccccagtttaattcta
tgcatgatttcaatacctttctacactttaattagatttttcatactttttatggaggta
ttttatgtgtatgtgagaaactcggaaagtgtgaatgatgaaataaaggaaggcaatcag
agcattctcttaacaatcttaataccataccttcagagtatcattttcctttttgtcata
aagtgtctagaaatgaagtatggacaaaaaacaatgaggaaagaaccagtcttcaggatc
tcaagaagtagggaaaatcatccaaacccagaagagccagaagaagaagatgagaatggc
caagctgcaagagcgagaacagcaaatgcactcactactctgaacccggatgagaaacca
ctcgtagtggcaagctgtttacacaaggcatataaagagaaaaaggaacattgcttttca
acaagaaagaagaaaatagctattagaaacatctcattctgcattaacaaaggtgaagtg
ttggggttgctgggacacaatggagccggtaaaagcacttctattaaaatggtaacagga
gacacaaagccaactgcaggaacggtggttttagaaggctacagaacatctccaaggcaa
ccggaagatgacaccgtcaagttcttggggtactgtcctcaggagaactcactgtggccc
ggtcttacggggaaagaccacctggagctgtaggcagcagtgaaaggaatgagcaaacag
gaggctgctctgagtacttctcgattggtggaagctttcaagctctaggaacaacttaaa
gtgcccgtgaaggacttaccccaagaaggaaagaggaagctgtgctttgcactgagcatc
ctgggagacccatcggtggtgcttctggatgagccatccacaggggtggaccccgagggg
caacagcaaatgtggcaggcaattcagaccattgttaaaaacacagagaagggtgttctc
ctgaccacccactccatggcggaggctgaggctgtgtgtgaccgcgtggccatcatggtg
tccggaaaactgaggtgtattggttccattcaaaatctgaaaagcaagtttggtaaagat
tatattctagaagtaaaaataaaggaccccactcaggtggaacctgtccacacggagatt
ctgaagctttttccgcaggctgcttggcaggaaagatattcctccatgatggcatataaa
ctacctgtggaagccgttcgccctctgtctcaggcctttttcaaattagaggcagtgaaa
cagaccttcgacctggaagaatacagcctctctcaggctaccttggaacaggtattctta
gaactctctaaagaacaggagctgggaaatcttgatgatgaagttgatacaacagttaga
tggaaactcctcgcacaagaagagccttaa
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integrated database retrieval system
