Leopardus geoffroyi (Geoffroy's cat): 123603375
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Entry
123603375 CDS
T10761
Symbol
SMG8
Name
(RefSeq) protein SMG8
KO
K18734
protein SMG8
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgf03019
]
123603375 (SMG8)
Messenger RNA biogenesis [BR:
lgf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
123603375 (SMG8)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
123603375
NCBI-ProteinID:
XP_045344153
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Position
E1:complement(27590550..27596336)
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AA seq
993 aa
AA seq
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MAGPVSLRELLMGASSWTGSESPEGSPTEGGGSVAGGPEPPWREDEICVVGIFGKTALRL
NSEKFSLVNTVCDRQVFPLFRHQDPGDSGPGIRTEAGAVGEAGGAGDAGAGAGAGDSVRG
GVATAEGNRTEPGSQDYSLLQAYYNQESKVLYLLLTSICDNSQLLRACRALQSGEAGGGL
SLPHAEAHEFWKHQEKLQCLSLLYLFSVCHILLLVHPTCSFDITYDRVFRALDGLRQKVL
PLLKTAIKDCPVGKDWKLNCRPCPPRLLFLFQLNGALKVEPPRSQDPTHPDKPKKHSPKR
RLQHALEDQIYRIFRKSRVLTNQSINCLFTVPANQAFVYIVPGSQEEDPVGMLLDQLRSH
CTVKDPESLLVPAPLSGPRRYQVMRQHSRQQLSFHIDSSSSSSSGQLVDFTLREFLWQHV
ELVLSKKGFDDSVGRNPQPSHFELPTYQKWISAASKLYEVAIDGKEEDLGSPTGELTSKI
LSSIKVLEGFLDIDTKFSENRCQKALPMAHSAYQSNLPHNYTMTVHKNQLAQALRVYSQH
ARGPAFHKYAMQLHEDCYKFWSNGHQLCEERSLTDQHCVHKFHSLPKSGEKPEADRNPPV
LYHNSRARSTGACNCGRKQAPRDDPFDIKAANYDFYQLLEEKCCGKLDHINFPVFEPSTP
DPAPAKNESSPAPPDADADKLKEKEPQTQGESTSLSLALSLGQSTDSLGTYPADPQAGGD
NPEVHGQGEVKTEKRPNLVDRQASTVEYLPGMLHSNCPKGLLPKFSSWSLVKLGPAKSYN
FHTGLDQQGFIPGTNYLMPWDIVIRTRAEDEGDLDTNSWPAPNKAIPGKRSAVVMGRGRR
RDDIARAFVGFEYEDSRGRRFMCSGPDKVMKVMGSGPKESALKALNSDMPLYILSSSQGR
GLKPHYAQLMRLFVVVPDAPLQIILMPQVQPGPPPCPVFYPEKQEITLPPDGLWVLRFPY
AYVTERGPCFPPKENVQLMSYKVLRGVLKAVTQ
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcctgtcagcttgcgagagcttctaatgggcgcttcgtcctggaccggctct
gaaagtcccgaggggtcccctacagagggcggagggagcgtggctggtggacccgagcct
ccttggcgagaggatgagatctgcgtggtaggaatcttcggcaagacggctctgcgactg
aattccgagaagttctcacttgtgaatacggtttgcgaccgacaggtctttcccctcttt
cgccaccaagatcctggggactcagggcctggaatcaggaccgaggctggcgccgtcggg
gaggctggtggagccggagacgctggggctggggctggggcgggggattcagttcgggga
ggtgtagctaccgctgaagggaaccgaactgagccaggctcccaggactacagccttctg
caggcctattacaatcaagaaagcaaagttctttatcttcttctcacttccatctgtgac
aattcccagcttctgcgggcttgtcgtgcccttcagagtggggaagctggaggtggcctc
tctttacctcatgcagaagcgcacgagttctggaagcaccaagagaagctgcagtgtctc
agtctcctttaccttttctccgtttgtcacatcctgcttctggtccatcccacttgctct
tttgacatcacgtatgatcgagtattcagagcccttgatggactgagacagaaggtactg
cccctcctcaaaacagccattaaggattgtccagttggcaaagactggaaactaaactgc
cgaccttgccctcctagactccttttcctctttcaactcaatggagccctcaaagtggaa
ccccctcggagccaagacccaactcatccagacaagcccaagaaacattctcctaaaagg
agactgcagcatgccctggaggaccagatctatagaatctttaggaagagtcgcgtctta
actaatcagagtatcaattgcctctttactgtgcctgccaaccaagcttttgtgtacata
gttcccggaagccaagaggaggacccagtaggcatgttgctggaccaacttaggagtcat
tgtactgtgaaggacccagaatctttgctggtgcctgcacccctttctgggcccaggcga
taccaggtgatgaggcagcatagccgacagcagctttcttttcacattgacagcagcagt
tccagttcttcagggcagctagtggatttcactcttcgggagtttctatggcagcatgtg
gagttagtcctaagcaagaaaggttttgatgacagtgtgggcaggaacccacagccttcc
cattttgaacttcccacttatcagaagtggatctcagcagcttcaaaactgtatgaagta
gctatagatgggaaagaggaggacctgggatctcccactggggagctaacatctaagatt
ttaagcagtattaaagtcttggaagggtttttggatattgacaccaaattctcagaaaac
cggtgccaaaaagctttacccatggcccatagtgcctatcagtcaaacttgcctcataac
tacacaatgactgtccataagaatcagcttgcccaggctcttcgagtatacagtcaacat
gctaggggtccagcctttcacaagtatgccatgcagttacatgaggactgctacaagttt
tggagcaatggccatcagctctgtgaggaaaggagtttaactgatcaacactgtgtacat
aagtttcactcattacctaaatcaggagaaaaaccagaggctgatagaaatcctcctgtg
ctgtatcacaacagccgagctcgatctactggtgcctgtaactgtggaaggaaacaagca
cctcgagatgatccctttgatatcaaggcagctaactatgacttttatcagcttctggaa
gaaaaatgttgtggaaaattggatcatatcaatttcccagtatttgaaccaagtactcca
gatcctgctcctgccaaaaatgaatcttctcctgcccctccagatgcagatgctgataaa
cttaaagaaaaagaacctcaaacccaaggagagagcacaagcctgagtttagctttgagt
ttaggccagtccacagatagtttaggtacctatccagctgatccacaagcaggaggagat
aatccagaagttcatggtcaaggagaagtaaaaactgagaagagaccaaacttggttgat
agacaggcatccacagttgagtatctcccaggcatgctacattcaaattgccctaaaggt
ctactacccaaattctccagctggtcgttggttaaattaggccctgctaagtcttacaac
tttcatacaggtttagaccaacaaggcttcattccaggaacaaactatcttatgccttgg
gacattgtcatcaggactagagctgaagatgaaggagacttagacacaaattcttggcct
gctccaaataaagctattcctggaaagagaagtgcagtagtaatgggaagaggaagacgg
agagatgacatagctcgagcatttgtgggctttgaatatgaagactctagaggtcggagg
tttatgtgttcaggacctgacaaagtaatgaaagtaatgggaagtgggccaaaggagtcc
gctttaaaagccctgaatagtgatatgcccttatatattctgtcatcatctcagggtaga
gggctaaaaccacattatgctcaacttatgaggctttttgttgtagttcctgatgctcct
ttgcagataatactaatgccccaggttcaaccaggcccaccaccatgtccagtattctac
ccagaaaaacaagaaatcactcttccaccagatggcctctgggtgttgagatttccttat
gcatatgtgactgagagaggaccttgtttccctcctaaggaaaacgtgcagttaatgagt
tacaaggtgctccgtggagttcttaaagcagtaacacaataa
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