Leopardus geoffroyi (Geoffroy's cat): 123603390
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Entry
123603390 CDS
T10761
Symbol
RNF43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
123603390 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lgf04121
]
123603390 (RNF43)
Enzymes [BR:
lgf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123603390 (RNF43)
Ubiquitin system [BR:
lgf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123603390 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
FANCL_C
Motif
Other DBs
NCBI-GeneID:
123603390
NCBI-ProteinID:
XP_045344191
LinkDB
All DBs
Position
E1:28331311..28396022
Genome browser
AA seq
782 aa
AA seq
DB search
MSGGHQLQLAALWPWLLMATLQAGFGRTGLVLAAAVESERSAEQKAIIRVIPLKMDPTGK
LNLTLEGVFAGVAEITPAEGKLMQSHPLYLCNASDDDNLEPGFISIVKLESPQRAPRPCL
SLASKARMAGERGASAVLFDITEDRAAAEQLQQPLGLTWPVVLIWGKDAEKLMEFVYKNR
KAHVRIELKEPPTWPDYDVWILLTVVGTIFVVILASVLRIRCRPHHNRPDPLQQRTAWAI
SQLATRRYQASCRRARAEWPDSSSSCSSAPVCAICLEEFSEGQELRVISCLHEFHRVCVD
PWLHQHRTCPLCMFNIVEGDSFSQSLGHSRSYQEPGRRLHLIRQHPGHAHYHLPAAYLLG
PSRSAVARPPRSGPFPTSQEPGTGPRHHRLPRAAHPRAPGEQQRLAVAQHPYAQGWGLGR
LRCTSQHLSACPAPPRRARPHDSSGSGESYRTERSGYMADGPASDSSSGPCHGSSSDSVV
NCTDISLQGIHGSSSTFRSSLSSDFDPLVYCSPEGEPRGEETQPSVTSRPRSLDSVVPTG
ETQVSSHVHYHRHRHHHYKKRFQWHGRKPGPETGLPQSRPAIPRTQPQPEPPSPDQQAAR
SNPAAPSGQLPNPQRPKALIEAAAGPADASSPSPSSLFHLQKSSLPVRHPQRKRRGCLSE
PPPASRPQDLTAHPTCQVFPHYATSLAYPWSPEAHPLIFGPPGLERRLLPETPGPCYPSS
RPVWLCLTPRQSLEPHPPGEGPCEWSCGTLEGRSCPYPHCQVPPAQPGSEEEELEELCEQ
AV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtggccaccagctgcagctggctgccctctggccctggctgctgatggctacc
ctgcaggcaggctttggacgcacaggactggtattggcagcagcggtggagtctgaaaga
tcagcagagcagaaagctattatcagagtgatccccttgaaaatggaccccacaggaaaa
ctgaatctcactttggaaggtgtttttgctggtgttgctgaaataactccagcagaagga
aaattaatgcagtcccaccccctgtacctgtgcaatgccagcgatgacgacaatctggag
cctggattcatcagcattgtcaagctggagagtccccagcgggccccgcgcccctgcctg
tcactggccagcaaggcccggatggcaggggagcgaggagctagtgcggtcctctttgac
atcactgaggatcgagctgctgctgagcagctacagcaacccctggggctgacttggcca
gtggtgttgatctggggtaaagatgccgagaagctgatggagtttgtgtacaagaaccga
aaggctcatgttaggattgagctgaaggagcccccaacctggccagattatgatgtgtgg
atcctcctgacggtggtgggcaccatctttgtggtcatcctggcttcagtgctgcgcatc
cgatgccgcccccaccacaacaggccggatccccttcaacagcgaacagcctgggccatc
agccagctggccaccaggaggtaccaggccagctgcaggagggcccgggctgagtggccg
gactcaagtagcagctgtagctcagcccctgtgtgtgccatctgcctggaggagttctct
gagggccaggagctacgggtcatttcttgcctccatgagttccatcgtgtgtgtgtggac
ccgtggctacatcagcatcggacttgccctctctgcatgttcaacatcgtagagggtgat
tcattttcccagtccctgggacactctcgatcttatcaggaaccaggccggagactccac
ctcattcgccagcatcccggccatgcccactaccacctacctgctgcatacctgttgggc
ccttcccggagtgcagtggctcggcccccgcgatctggtcccttcccaacctcgcaggag
ccaggcacaggcccccggcaccaccgtctccccagagccgcacatcctcgggctccgggc
gagcagcagcgcctggcggtggcccagcatccctacgcgcagggctgggggctaggccgt
ctccgatgcacctcacagcacctctccgcttgcccagcacccccacgccgggccaggcct
cacgacagcagcggttctggagaaagctaccgcacggaacgtagtggctacatggcagac
gggccagccagtgactccagttcggggccctgtcatggctcttcaagtgactcagtggtc
aactgcacggacatcagtctgcagggcatccatggtagcagttctaccttccgcagctcc
ctgagcagtgactttgaccccttggtgtactgcagccctgaaggggagccccggggggag
gagacccagcctagtgtgacctctcggccccgttctttggactcagtggtacccacagga
gaaacccaggtttccagccacgtccactaccaccggcaccggcaccaccactacaaaaag
cgcttccagtggcatggccggaagcctggcccagaaactgggttgccccagtccaggcct
gccattcctcggacacagccccagccagagccgccttcccctgatcagcaagctgccaga
tccaacccagctgccccttcaggacagctccccaatccacaacggcccaaggccctcatc
gaagcagccgcaggcccagctgatgcctccagccccagtcccagcagcctcttccacttg
cagaaatccagcctccctgttcgacatccacagaggaaaaggcgagggtgcctctcagag
ccccccccagcctctcggccccaggacttgactgcacacccaacttgccaggttttcccc
cattatgctaccagcttggcatacccttggtccccagaggcccatccattgatctttgga
cctccaggcctggagaggaggctgctaccagaaaccccaggcccttgttacccaagttca
cggccagtgtggttgtgtttgactccacgccagtccctggaaccacacccacccggggaa
gggccttgtgaatggagttgtggcaccctggagggcaggtcatgcccttacccacactgc
caggtgccgccagcccagcctggctcggaggaggaggagcttgaggagctgtgcgaacag
gctgtgtga
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