Leopardus geoffroyi (Geoffroy's cat): 123603413
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Entry
123603413 CDS
T10761
Symbol
TRIM25
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04064
NF-kappa B signaling pathway
lgf04622
RIG-I-like receptor signaling pathway
lgf05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
123603413 (TRIM25)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
123603413 (TRIM25)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
123603413 (TRIM25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lgf04121
]
123603413 (TRIM25)
Enzymes [BR:
lgf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123603413 (TRIM25)
Ubiquitin system [BR:
lgf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
123603413 (TRIM25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
ANCHR-like_BBOX
zf-B_box
KAR9
UPF0231
DHR-2_Lobe_C
Motif
Other DBs
NCBI-GeneID:
123603413
NCBI-ProteinID:
XP_045344251
LinkDB
All DBs
Position
E1:29658028..29680067
Genome browser
AA seq
608 aa
AA seq
DB search
MAELVPLAEELSCSICLEHFKVPVTTPCGHNFCSSCLDETWAVQEPPYLCPQCRASYQER
PQLHKNTVLCAVVEQFLQAEVARAAPSPPDGCTPPARAAEPSPPCQVACDHCLKAPAVKT
CLVCMASFCQEHLQPHLDSPAFRDHQLQPPVKDLMRRKCPQHNRLRDFFCPQHDECICHI
CLVEHKACSPETLSQASADLQTKLKHKLTIICDQINGASRALEDVRARQQDIRETARRKM
EQLRQEYVEIKILIDAAEAICTRKIKEEQKRVNTKFDNIYQILLKNKSEIQTLKEEIELA
LTKEDEFEFLEKAIKLQGISTKPVYVPKMELNQELIKGVCQGTSDLKNELKRYIRLPQDK
KPEGPTGLGNLGEHGPASTHKPAHFVKKFLKEEKKHKKPPVAKASAVQPNPVSLTTKVLD
TFLAKSRPELLEYATKFSLDYNTAHNKVALLENYTVASVADLPLNYQPHPKRFTYCSQVL
GLHYYRKGIHYWEVELQKNNFCGVGICYGSMPRQGPDSRLGRNSASWCVEWFNTKVSAWH
NNVEKTLPSTKATRVGVLLNCDHGFVIFFAVTDNVHLMCKFKVDFTEAVYPAFWVFSAGA
TLSICSCK
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctggtccccctggcggaggagctgtcgtgctccatctgcctggagcacttc
aaggtgccggtcaccaccccgtgcggccacaacttctgcagctcgtgcctggacgagacg
tgggccgtccaggagccgccgtacctgtgcccgcagtgccgcgccagctatcaggagcgg
ccgcagctgcacaagaacacggtgctgtgcgcggtggtggagcagttcctgcaggccgag
gtggcccgggcggcgccgtcgccccccgacggctgtacgccgcccgcccgcgccgcggag
cccagcccgccctgccaggtggcctgcgaccactgcctgaaggcgcccgccgtcaagacg
tgcctggtgtgcatggcctccttctgccaggaacacctgcagccgcacctcgacagcccc
gcctttcgggaccaccagctgcagccgcccgtcaaggacctgatgcgccgcaagtgtccc
cagcacaacaggctgcgggacttcttctgcccccagcatgatgagtgcatctgccacatc
tgcctggtggagcacaaggcctgctcgcctgagaccctgagccaggccagcgcagacctg
cagaccaagctgaagcataaactgaccatcatatgcgatcagatcaatggtgcatcgagg
gcgctggaggacgtgagagccaggcagcaggacatacgggagactgcccgcaggaagatg
gagcagctcagacaagaatatgtggaaatcaagatactcattgatgctgcagaggccatc
tgcacacgaaagataaaggaggagcagaagagggtcaataccaagttcgacaacatttac
cagatcctcctcaagaacaagagtgagatccagactctgaaggaggagattgaacttgcc
ctgaccaaggaggacgagttcgagtttctggagaaagcgatcaaactgcagggaatctcg
acaaagccggtctacgtccccaagatggagctgaatcaggagctgataaagggtgtctgc
cagggcacctcagacctcaaaaacgagctgaagcggtatatcaggctgccccaggacaag
aagcccgagggacccaccggcttagggaaccttggagagcatggcccagcgtccacgcac
aaacctgcacactttgtgaagaagttcctgaaagaagaaaagaaacacaagaaacctcct
gtagccaaagcctccgctgtgcagccgaacccggtgtccctcacgaccaaggtgctggat
accttcttagccaagtccaggcccgagctcctagagtatgccactaagttcagcctggac
tacaacaccgcccacaacaaggtggctctgttggagaactacactgtagcttctgtggcc
gacttgcccctgaactatcagccacaccccaagaggttcacatactgctctcaggtgctg
ggcctgcactactacaggaaggggatccactactgggaggtggagctgcagaagaacaac
ttctgcggggtgggcatctgctatggcagcatgccccgccagggccccgacagccggctc
ggtcgcaacagcgcctcctggtgcgtggagtggttcaataccaaggtctctgcctggcac
aacaatgtggagaaaacgctgccctccaccaaggccacgcgggtcggcgtgcttctcaac
tgtgaccatggcttcgtcatcttctttgccgtcaccgacaacgtccacctgatgtgtaag
ttcaaggtggactttaccgaagctgtgtacccggccttctgggtgttctctgcgggtgcc
acgctctccatctgctcctgcaagtag
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