Leopardus geoffroyi (Geoffroy's cat): 123603981
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Entry
123603981 CDS
T10761
Symbol
ABCA6
Name
(RefSeq) ATP-binding cassette sub-family A member 6 isoform X1
KO
K05649
ATP-binding cassette, subfamily A (ABC1), member 6
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
123603981 (ABCA6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lgf02000
]
123603981 (ABCA6)
Transporters [BR:
lgf02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
123603981 (ABCA6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
SMC_N
AAA_15
AAA_29
nSTAND1
MMR_HSR1
AAA_23
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
123603981
NCBI-ProteinID:
XP_045345510
LinkDB
All DBs
Position
E1:complement(50157793..50218437)
Genome browser
AA seq
1620 aa
AA seq
DB search
MNMKQKSVYHQTQALLHKNFLMKWRMKRESLLEWIFPILLGLYMGLFSHFREKTYFPEIP
PQALGRADNFNNSIGVVYTPVSDITQQIVNKTTFAPFVKERRIIGVPNQKSMDKLLLDSF
ADLVGIIFNDAFSYKLKFVQGYNIPFLKEDLFTAHCWNMHGDFSCSLAKYWNRGFVTLQT
AIDAAIIQIATNRSVTEELMSVTAINMKTLPFIHKNILQKEMFIFYCLLYFFPLIHFISL
NVTKERKKWKDVMKMMGLQDSAFWLSWGLIYAGFIFIISIIITVVITSTQIIVMTGFMVI
CTLFFLYGLSLIALVFLMSVLLKKTVLTNLVMFLLIVFWGGVGFAAYYRQLPSSLEWILS
ICSPFTFTAGLSKIIHLDSTMNGVIFPDPSGDSYVLIATFSVLAFDALFYLALALYFDKI
LPCGNERHYSPLFFLNSSCFQHQRTNNKVTEKEIDPEHPSDDCFEPVAPEFQGKEAIRIK
NVKKEYTGKSGKTEALKDLLLDIYEGQITAILGHNGAGKSSLLNILNGSSVPTEGSVTIY
NKNPSETQDLEEIRKMTGVCPQFNVQFDILTVKENLRLFAKIKGIRPQEVEREVQRILLE
LDIQNIQDNLAEHLSEGQKRKLTFGIAILGDPQILLLDEPTAGLDPFSRHRMWSFLKEHK
AGRVILLSTNLMDEADILADRKVIMSNGRLKCAGSSVFLKRKWGLGYHLSLYRNEICDPE
KITSFINHYIPDAKLKTENKEKLVYTLPVERTNKFPDLFSDLDKCSDQGVMSYDVSTSTL
SDVFMKLEGKSTIEQDFEQAEVIRDTESLRDIEPAWSSLPETRKNMSDLGLWKMQICAIA
RLRFLKLKHGKKELLTLLLVFGIAVFPLVVEKILYAILFQKSDWEFKPELYFLTPGQPPE
DPRTSLLIINNTESNIEDFIQSLKHQNILLEVDDFANRNGTGDLSYNGAIIVSGKQKDYR
FSVVCNTLRLHCFPILVNIVSNGLLRMFNSTQNIRIERSPYPFNYVLFSIGLPEGSMFLF
WVVCSMSPYISMSSVSDYKRRAKSQLWISGLYPSAYWCGQALVDISLFVFLLLSMYLIFY
IANITSIYITSRIVFALAVITLGYAASLVFLTYVISFIFRKRRKNSGLWSFCFFITSTIM
FDTLVMNHFTLPVLIASMILIPSSTMGEFLAFLAERAQAYHSDNQDHHFDLSGVDLLVCL
IPYFQTLILVFLLRCMEAKWGKKTTRRDPVFRISPQSRGAQPNPEEPGDEDEDVKAERIR
TATALATSLSEEKPVIIASCLHKEYAGQKKSCFSKRKKKIAARNISFCVKKGEILGLLGP
NGAGKSSSIRMISGIAKPTAGEVELRGWGHRGDSMVGFLGYCPQENVLWPCLTVREHLEV
FTAIKGLRKGDATVAISRLVDTFTLREQLNVPVQKLTAGATRKLCFVLSILGNSPILLLD
EPSTGMDPGGQQQMWQMIQAAIKNTEKGALLTTHYLAEAEAICDRVAIMVSGRLRCIGSI
QHLKNKLGKDYVLELKVKESSQVTWVQAEILKLFPQAAQQERCSSFLAYKIPLADVYPLS
QTFHKLEAVKHKFNLEEYSLSQCTLEKVFLELSKEQELGNFEEEIDTTMRWELLSPSDDS
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgaaacagaaaagtgtgtaccaccaaactcaggcgcttctgcacaagaatttt
cttatgaaatggagaatgaaaagagagagcttattggaatggatattcccaatacttctg
ggactctacatgggactgttttcacacttcagagaaaagacatattttcctgaaattcct
ccccaagctctgggaagggcagataactttaataactctataggtgttgtgtatacaccc
gtctctgatataacacagcagatagtgaataaaacgacatttgctccctttgtgaaagaa
agaagaatcatcggagtgccaaatcaaaaatccatggataaactacttttagacagtttt
gcagacctggtgggaatcatctttaatgacgctttctcttataagctaaaatttgttcag
ggatataacattccgtttttgaaggaagatcttttcacagctcattgttggaatatgcat
ggtgacttttcctgttctctggccaaatactggaatagaggatttgtgactttacaaact
gccattgacgctgctatcatacaaatcgcaacaaaccgctctgtgacagaagagttgatg
tcagttactgctataaatatgaagactttaccttttattcataaaaacattcttcaaaag
gagatgtttattttctactgccttctttacttttttccattgatacactttatatcgctc
aacgttacaaaagagaggaaaaaatggaaggatgtgatgaaaatgatgggtctacaagat
tcagccttctggctctcctggggcttaatctatgctggcttcatcttcattatttccata
atcattacagttgtcataacatctacccaaattatagtcatgacaggcttcatggtcata
tgtacactctttttcttatacggcttgtccttgatagctttagtgttcctgatgagtgtg
ttgctaaagaaaacggtcctcaccaatttggttatgtttctcctcattgtcttctggggg
ggcgtgggattcgccgcatattacagacaactcccttcctctctggagtggattttgagt
atctgcagcccatttacctttactgctggattgagtaagattatccacttggatagtact
atgaacggtgtaatttttcctgacccttcaggagactcctatgtactgatagcaactttt
tctgtattggcttttgatgcgcttttctacctggcattggcattatattttgacaaaatc
ttaccctgtggaaatgagcgccattactctccattatttttcctgaactcgtcttgtttc
caacaccaaaggactaataataaggtcactgagaaagaaatagatcctgagcatccttct
gatgattgtttcgaaccggtagctccagaattccaaggaaaagaagccatcagaatcaaa
aacgtcaaaaaagaatatacaggaaagtctggaaaaacagaagcactgaaagacttactc
cttgacatatatgaagggcaaatcacagcaattctgggtcataatggagctggcaaatct
tcattactaaacatccttaatggatcgtctgttccaacagaaggatcagttaccatctat
aataaaaatccctctgagacacaagacttggaggaaatcagaaagatgactggcgtgtgt
cctcaattcaatgttcaatttgacatcctcacggtgaaggaaaacctcaggctgtttgct
aaaataaaagggattcggccacaggaggtagaacgagaggtacaaaggattttattagaa
ctggacatacaaaacattcaggacaacctcgctgaacatttaagcgaaggacagaaaaga
aagctgacctttgggattgccattttaggagatcctcaaattttgctcttagatgagcca
actgctgggttggatcccttttcaaggcatcgaatgtggagcttcctcaaggagcacaaa
gcaggccgtgtgatcctcttgagtaccaatctcatggatgaggctgacatcctggctgat
agaaaagtgatcatgtccaatgggagactgaagtgtgcaggatcttctgtctttttgaag
agaaaatggggtcttggatatcacttaagtttgtacagaaatgaaatatgtgatccagaa
aaaataacatccttcattaatcattacatccctgatgctaaattaaaaacagaaaacaaa
gaaaagcttgtgtataccttgcctgtggaaaggacaaataaatttccagaccttttcagt
gatcttgataagtgttctgaccagggtgtgatgagttatgacgtttccacatcaactctg
agtgacgtcttcatgaaactggaaggaaaatcaactatcgaacaagattttgaacaagca
gaggtgataagagacacagaaagcctacgtgacatagagccagcttggtcttctctccct
gaaacgcggaagaatatgagcgacttgggcctctggaaaatgcagatttgcgcgatagca
cggctccgtttcttgaagttaaaacatggaaagaaagagcttttgaccttactcttggta
tttggaattgcagtgttcccgctggttgtggaaaagatactttatgccatattatttcaa
aagagtgattgggaatttaaacctgagctgtatttcctcactcctggacaaccccccgaa
gaccctcgtaccagcttgttgatcatcaataacacagagtcaaacattgaagattttata
cagtcactgaagcatcagaatatacttttggaagtagatgactttgcaaacagaaatggc
actggtgacctgtcatacaacggagctatcatagtttctggtaaacaaaaggattataga
ttttcagttgtgtgcaataccttgaggctgcactgttttcctattctcgtcaatattgtt
agcaacggactacttcgaatgtttaattctacacaaaatattcgaattgagagaagccca
tatccttttaattacgtgttattctcgattgggctgccagaaggttccatgttcttattt
tgggtggtgtgcagcatgtccccttacatctccatgagcagtgtcagcgattacaaaagg
agagctaagtcccagctgtggatctctggcctctacccttctgcctactggtgtgggcag
gcactggtggatattagcctcttcgtttttcttctcctttcaatgtatttaattttctac
atcgcaaacataacaagcatttatatcacaagtcgaattgtgtttgccctggctgtgatt
acgcttggttatgcagcttcgctggtcttcttgacgtatgtgatatcgtttatttttcgc
aagaggagaaaaaatagtggcctttggtcattttgcttctttatcacctcaaccattatg
tttgacacccttgtaatgaatcacttcaccttacctgtcttgattgccagcatgatatta
attccttcatccaccatgggtgaatttctagcttttttggcagagagagcccaggcgtac
cattcagacaatcaggaccaccattttgatctgagtggagtggatcttctagtatgccta
ataccctactttcagacgttgatactggtgtttctcctgagatgcatggaagcgaaatgg
ggaaagaaaacaacgcgaagggatcctgttttcagaatttccccccagagtagaggtgct
caacccaatccagaagaacctggtgatgaggatgaagatgtgaaagcagaaagaataaga
acggcaactgccctggccacttcactctcagaggagaaacctgtcataattgctagctgt
ctccacaaagagtatgcagggcagaagaaaagttgcttctcaaagagaaagaagaaaata
gcagcgagaaatatctccttctgtgttaaaaaaggtgagattttgggattgctaggacct
aacggtgccggtaaaagttcatctattagaatgatttctgggatcgcaaagcccacagct
ggagaggtggagctgagaggctggggtcatcggggagacagcatggtgggcttcctgggg
tactgtcctcaggagaacgtgctgtggccctgcctgacagtgagggaacatctggaggtg
ttcactgccatcaaagggctgaggaaaggggacgccactgttgccatctcacggctggtg
gatactttcaccctgcgcgaacagctaaatgtgccggtgcagaaattgacggccggagcc
actcgaaagttgtgttttgtgctgagcatcctgggaaattcacctatcctgcttctggat
gaaccatcgacgggcatggatccaggagggcagcagcaaatgtggcagatgatccaggca
gccattaaaaacacagagaagggggccctgctgaccacccattacctggctgaagcagag
gccatttgtgaccgcgtcgccatcatggtgtctggaaggctgaggtgcatcggctccatc
caacacctgaaaaacaaacttggcaaggattacgttctagaactgaaagtgaaggaatcg
tcccaggtgacgtgggtccaagccgagattctgaagctcttcccacaggctgcacagcaa
gaaaggtgttcatccttcttggcctataagatacctttggcggatgtgtaccctctatct
cagacctttcacaaattagaggcagtgaaacataaatttaacctggaagaatacagcctt
tcccagtgcacattggaaaaggtatttttagagctttctaaggaacaggagctggggaat
tttgaagaagaaattgatacaaccatgagatgggaactcctctctccttcagacgactct
taa
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