Leopardus geoffroyi (Geoffroy's cat): 123604102
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Entry
123604102 CDS
T10761
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03013
Nucleocytoplasmic transport
lgf03015
mRNA surveillance pathway
lgf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123604102 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
123604102 (EIF4A3)
03015 mRNA surveillance pathway
123604102 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgf03019
]
123604102 (EIF4A3)
03041 Spliceosome [BR:
lgf03041
]
123604102 (EIF4A3)
03009 Ribosome biogenesis [BR:
lgf03009
]
123604102 (EIF4A3)
03012 Translation factors [BR:
lgf03012
]
123604102 (EIF4A3)
Enzymes [BR:
lgf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123604102 (EIF4A3)
Messenger RNA biogenesis [BR:
lgf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123604102 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
123604102 (EIF4A3)
Spliceosome [BR:
lgf03041
]
Complex C
Other components
EJC/TREX
123604102 (EIF4A3)
Ribosome biogenesis [BR:
lgf03009
]
Eukaryotic type
90S particles
Helicases
123604102 (EIF4A3)
Translation factors [BR:
lgf03012
]
Eukaryotic type
Initiation factors
eIF-4
123604102 (EIF4A3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
TniB
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
123604102
NCBI-ProteinID:
XP_045345757
LinkDB
All DBs
Position
E1:complement(59113891..59125411)
Genome browser
AA seq
411 aa
AA seq
DB search
MAATATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacggccacgatggcgacctcgggctcggcgcggaagcggctgctcaaagag
gaggacatgaccaaagtggaattcgagaccagcgaggaggtggacgtgacgcccacgttc
gacaccatgggcctgcgggaagacctgctgcgcggcatctacgcctacggttttgaaaaa
ccgtcagccatccagcagcgagccatcaagcagataattaaaggcagagacgtcatcgct
cagtctcagtctggcacaggcaaaaccgccacgttcagcatttccgtcctccagtgtttg
gatattcaggttcgtgaaacccaggctttgatcttggctccaacgagggagttggctgtg
cagatccagaagggcctgctcgcgctgggtgactacatgaacgtccagtgccatgcctgc
atcgggggcaccaatgtgggggaggacatcaggaagctggactacgggcagcacgtcgtc
gccggcacccccgggcgtgtctttgacatgattcggcgcagaagtttgaggacgcgcgct
atcaagatgttggttttggatgaggctgatgaaatgttgaataaaggtttcaaggagcag
atttacgacgtgtacaggtacctgcccccggccacacaggtggtgctcatcagcgccacg
ctgcctcacgaaatcctggagatgaccaacaagttcatgacggaccccattcgcatcttg
gtgaagcgcgatgaactgaccctagaaggcatcaagcagttttttgtagcggtggagagg
gaagagtggaaattcgacaccttgtgtgacctgtacgacacgcttaccatcactcaggcg
gtcatcttctgtaacaccaaacggaaggtggactggctgacggagaagatgcgagaggcc
aacttcaccgtgtcgtccatgcacggcgacatgccgcagaaggagcgcgagtccatcatg
aaggagttccggtccggcgccagccgtgtgctcatctccacggacgtctgggccaggggc
ttggacgtccctcaggtgtccctcatcattaactacgacctgcccaataacagagagctg
tacatacacagaatcgggcgctcgggccgctacggccggaagggggtggccatcaacttt
gtgaagaacgacgacatccgtatcctgagagacatcgagcagtactactccacccagatc
gacgagatgcccatgaacgtggctgacctgatctga
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