Leopardus geoffroyi (Geoffroy's cat): 123604532
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Entry
123604532 CDS
T10761
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM47-like isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04064
NF-kappa B signaling pathway
lgf04622
RIG-I-like receptor signaling pathway
lgf05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
123604532
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
123604532
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
123604532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lgf04121
]
123604532
Enzymes [BR:
lgf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123604532
Ubiquitin system [BR:
lgf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
123604532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
RING_XB3-XBAT31
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
EGF_integrin
zf-Tbcl_FmdE
zf-Nse
Motif
Other DBs
NCBI-GeneID:
123604532
NCBI-ProteinID:
XP_045346753
LinkDB
All DBs
Position
E1:55288502..55295792
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AA seq
651 aa
AA seq
DB search
MRRTSVPLQGPSAPAVASSWLCSIFSGPVQDHKPAPQPPAQPSSPSHAQLLMSNSSLLTF
EDQVLCPICLEVFRNPVTTTCGHNFCMACLQGFWDHLAAVGETLYCPQCRESFPSRPRLC
KNGILEEMVTCLAQVKGQTLGSSRPLAGPRDVPCDFCSAQKLKSVKSCLQCMASLCEKHL
SSHFEDQMFQDHELLEPVWDLKSRLCRKHRKLRRLYCRTEGSCVCGACLLEEHKNHDTIP
LEEERARKEVEVRKVQASVENQMLIINSDSQRHRGQVAFLSKLIQTTRDEVNACFSEIIQ
EVKQLQMKVLDFVEKEEAAALGKLGSSIQQSHSRLLKLEGDSIWLRALLANRSDQQFLQE
FPRLKHFPACSEALMSTNCEEKQSFLQLPETLAELRTRLLDVGLSFIHQLLLKGDAASWK
PMPLSERTLGCKSVLSKAPQSPPGIKMNSYELLPSAVDRKTLLKCYCNLNFDPTTASEEL
FLFKETHSVLNLGILLEPFAAGGPFPGFKQWPQVLCSRGLSEGRHYWEAEVSNSWVCLGL
TYRRSPPLGGRPRRNIVYLLGRNPYSWCLEWDSLKFSVWHNNTQTVLHGGYHRTLGVALD
CGTGCLSFYGVAGGVSLLYRFLVSFLEPLYPAVMVSSGASVTLKQRPEAEA
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggactagtgtacccctccaaggcccctcggctcctgccgtggcttcttcgtgg
ctttgctctatcttctcagggccagtccaggaccacaagccagccccgcagccaccggcc
cagccctcaagcccttcccacgctcagctcctgatgagtaacagcagtctcctcacgttt
gaggaccaagtcctctgtcccatctgcctggaggtgttccgcaacccggtcaccaccacc
tgcgggcacaacttctgcatggcctgcctccaaggtttctgggaccacctggctgccgtg
ggcgagacactgtactgcccccagtgccgggagagcttcccctccagaccgcgcctctgc
aagaacggcatcctggaggagatggtgacctgcttggcccaggtcaagggccagaccttg
gggtcctcacggcccctggccgggcccagggacgtgccctgcgacttctgttccgcccag
aagctcaagtcagtcaagtcgtgtctgcagtgcatggcctccctgtgcgagaagcacctg
agcagccacttcgaggaccagatgttccaggaccacgagctgctggagcccgtgtgggat
ctcaagagccgcctgtgccggaagcatcgcaaactgcggcggctgtactgccgcacggaa
ggcagctgcgtgtgcggagcctgtctgctggaggaacacaagaaccacgacaccatcccc
ctggaggaggaacgtgccaggaaggaggtggaggttcggaaggtccaggccagcgtggaa
aaccagatgctgatcatcaactctgacagccagaggcaccgggggcaggtggcctttctc
tcgaaattgatccagacaacacgcgatgaggtgaacgcctgcttctcagagatcatccag
gaggtcaaacagctgcagatgaaggtcttggattttgtcgagaaagaggaggcagccgct
ctggggaagctgggcagctccatccagcagagccacagccggctcctgaagctggagggg
gacagcatctggctccgcgccctgctcgccaacaggagcgaccagcaattcctgcaggag
ttccccagactgaagcactttcccgcctgctcggaagccctgatgagcaccaactgcgag
gagaagcagagctttctccagttgccggagaccctggcggagctccggacacggctgctg
gacgtgggtctcagcttcatccatcagctcctcctgaagggtgacgcagcctcctggaag
cccatgcccctctctgaaaggacactgggctgtaagagtgtcctcagcaaagctcctcaa
tctcctccaggcattaagatgaactcctatgagttgctgccctcagctgtggacaggaaa
acacttctcaagtgttactgcaacctgaacttcgaccccaccacggccagcgaggaactg
ttcctgttcaaggagacccactcggtgctgaacctgggcatccttctggagcccttcgcc
gcgggcggccccttccccggcttcaagcagtggccgcaggtgctgtgctcgcgcggcctg
tccgagggccgccactactgggaagccgaggtgtccaactcgtgggtgtgcctgggcctc
acctaccgccgcagccccccgctcggcggccgcccgcgccgcaacatcgtctacctgctg
ggccgcaacccgtactcgtggtgcctggagtgggactcgctcaagttctccgtgtggcac
aacaacacgcagacggtgctgcacggcggttaccaccgcacgctcggcgtggcgctcgac
tgcggcaccggctgcctctccttctacggcgtggcgggcggcgtgagcctgctttaccgc
ttcctcgtctccttcctggagccgctctaccccgcggtcatggtcagcagcggcgcctcg
gtcacgctcaagcagcgccccgaggcggaggcgtag
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