Leopardus geoffroyi (Geoffroy's cat): 123605032
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Entry
123605032 CDS
T10761
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta-15-like
KO
K16494
protocadherin beta
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lgf04515
]
123605032
Cell adhesion molecules [BR:
lgf04515
]
Cadherins
Protocadherins
123605032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
123605032
NCBI-ProteinID:
XP_045347258
LinkDB
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Position
A1:117035285..117038515
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AA seq
792 aa
AA seq
DB search
MEAEEERFPKLRQVLLLFVLLAHTCAEREDYFITEETESGSFVANLAKDIGLGARELSRR
RARIIFNNDKKHFQLNLQTGDLQVNEKLDREELCGPTEPCVLQFQVLLEEPLEVYRYKLL
VTDINDNSPVFPEAEMILKIMENTLPGAVFPLKNAQDLDVGVNNVQNYTIYPNSHFHVLT
RNSGEGRKYPELVLDKALDREQQPEFRLTLMAVDGGTPPKTGTTLVLIDVLDINDNAPEF
VQPLYRVQILENSPLGSVIVTVSARDLDTGINGEVVYSFFYGDEEITRTFALNELTGEIK
IIRKLDFEKIKSYELDIKASDGAGLSGKCTVIIEVVDINDNTPEMTVASLINSIPENSPE
TTIALFSIQDPDSGENGRMVCSIQEDIPFTLKHSVENFYKLVTEGVLDRETRSEYNITIT
VTDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVRENNSPALHIGSVSATDRDSGA
NAQVTYSLLPPADPQLPLASLVSINADNGQLFALRSLDYEALQAFEFGVRAADRGSPALS
SQARVRVLVLDDNDNAPFVLYPPQNGSAPCTELVPRAAEAGYLVTKVVAVDGDSGQNAWL
SYQLLKATEPGLFGVWAHNGEVRTARLLSERDAVKHRLVVLVRDNGEPPRSASVTLHVLL
VDGFSQPYLPLPEVAAAEARADPLTVYLVVALASVSSLFLFSVLVFVAVRLCRRSRAASA
GRCSGPEGHFPGHLVDVSGAGTLSQSYQYEVCXRRGSGTKEFKFLKSVVSIAQQKSVNDV
EENTHFVNFGFN
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgaagaggagcgttttcctaaactaaggcaagttcttcttctctttgttttg
ctggctcacacttgcgcggagcgggaagattattttattacagaagaaacagagagtggt
tcttttgtggccaatctagcaaaggatatagggctaggggcaagagagctctctcggcgg
agggctcggatcatttttaacaatgacaaaaagcattttcagctgaaccttcagactgga
gatttacaagtaaatgagaaactggatcgggaagaattgtgtggtcccactgaaccttgt
gtactgcaatttcaagtgttactggaagaacctttggaggtatataggtataagcttttg
gtcactgacataaatgacaattcccctgtgttcccagaggcagaaatgattttaaaaatc
atggaaaatactcttccaggggctgtgtttcccctgaaaaatgcgcaagatttggatgta
ggtgtcaataatgttcaaaactacaccatttatcccaactcccatttccacgtgctcacc
cgcaacagcggtgaaggcagaaaatacccggaactggttctggacaaagccctagatcga
gaacagcagcccgagtttagattaactctcatggcagtagatggtggaactcctcccaaa
actgggactaccctggtactcattgatgttttggacatcaatgacaatgctcctgagttt
gtgcagccactctatcgtgtgcagatcctggaaaacagtcccctgggatctgttattgtc
actgtttcagctagagatttagacacaggaataaacggtgaagtagtctattcatttttc
tatggcgatgaagagattactaggacatttgcacttaatgaactcacaggagaaattaaa
ataattaggaaattagattttgaaaaaattaagtcatatgagctagatattaaggcttct
gatggggcaggtctttcgggaaaatgcactgtcataatagaggtggtggatataaatgac
aacaccccagaaatgacggtggcttcccttataaattccatccctgaaaattcccctgag
acgacgatagcccttttcagtattcaagacccagactctggggaaaatgggaggatggtt
tgttccatccaggaagatattccgttcactctgaaacattctgttgaaaatttctacaag
ttagtaacagaaggagtgctagacagagagacaagatctgagtacaacatcaccatcacc
gtcaccgacttggggacccccaggctgaaaacgcagcacaacatcaccgtgacggtctcc
gacgtcaacgacaacgccccggccttcagccaaaccacctacaccctgcgcgtccgcgag
aacaacagccccgccctgcacatcggcagcgtgagcgccacggacagggactcgggcgcc
aacgcccaggtcacctactcgctgctgccgcccgcggacccgcagctgcccctggcctcc
ctggtgtccatcaacgcggacaacgggcagctgttcgcgctcaggtccctggattacgag
gcgctgcaggcgttcgagttcggcgtgcgcgcggccgaccgcggctcgcccgcgctcagc
agccaggcgcgggtgcgcgtgctggtgctggacgacaacgacaacgcgcccttcgtgctg
tacccgccgcagaacggctctgcgccctgcaccgagctggtgcccagggcggccgaggcg
ggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcctggctg
tcgtaccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcacaacggc
gaggtgcgcacggcccggctgctgagcgagcgcgacgccgtcaagcacaggctggtggtg
ctggtcagggacaatggcgagccgccgcgctcggccagcgtcacgctgcacgtgctgctg
gtggacggcttctcgcagccctacctgccgctcccggaggtggcggcggccgaggcgcgg
gcagacccgctcaccgtctacttggtcgtcgccttggcgtccgtgtcgtcgctcttcctg
ttctcggtgctggtgttcgtggcggtgcggctgtgcaggcggagccgggcggcgtctgcg
ggtcgctgctcggggcccgagggccactttccgggccacctggtggacgtcagcggcgcg
gggacgctgtcccagagctaccagtacgaggtgtgtnncaggagaggatctgggaccaag
gaatttaagtttttgaaatctgttgtctccattgctcaacagaagtctgtgaatgatgtg
gaggaaaacacacattttgtaaattttggattcaattag
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