Leopardus geoffroyi (Geoffroy's cat): 123605329
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Entry
123605329 CDS
T10761
Symbol
TNPO2
Name
(RefSeq) transportin-2 isoform X1
KO
K18727
transportin-2
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123605329 (TNPO2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgf03019
]
123605329 (TNPO2)
Messenger RNA biogenesis [BR:
lgf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
123605329 (TNPO2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
TPR_IMB1
Arm
HEAT_GCN1
TOR1L1_N
HEAT_2
IBN_N
HEAT_EF3_N
Vac14_Fab1_bd
Cnd1
TPR_IPO5
HEAT_MROH2B_C
TPR_DNAAF5
Adaptin_N
PDS5
HEAT_MROH2B_1st
MMS19_C
Ltn1_1st
TPR_CAND1
HEAT_GCN1_C_2
TPR_TTI1_C
TPR_IPO11
CandA_N
PIK3R4-like_middle
RTP1_C1
DUF2573
Motif
Other DBs
NCBI-GeneID:
123605329
NCBI-ProteinID:
XP_045348015
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All DBs
Position
A2:complement(9022549..9041366)
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AA seq
928 aa
AA seq
DB search
MDWQPDEQGLQQVLQLLKDSQSPNTATQRIVQDKLKQLNQFPDFNNYLIFVLTRLKSEDE
PTRSLSGLILKNNVKAHYQSFPPPVADFIKQECLNNIGDASSLIRATIGILITTIASKGE
LQMWPELLPQLCNLLNSEDYNTCEGAFGALQKICEDSSELLDSDALNRPLNIMIPKFLQF
FKHCSPKIRWVWLPRVGVGVCGGAGRGRSQGRPTCPLPARSHAIACVNQFIMDRAQALMD
NIDTFIEHLFALAVDDDPEVRKNVCRALVMLLEVRIDRLIPHMHSIIQYMLQRTQDHDEN
VALEACEFWLTLAEQPICKEVLASHLVQLIPILVNGMKYSEIDIILLKGDVEEDEAVPDS
EQDIKPRFHKSRTVTLPHEAERPDGSEDAEDDDDDDALSDWNLRKCSAAALDVLANVFRE
ELLPHLLPLLKGLLFHPEWVVKESGILVLGAIAEGCMQGMVPYLPELIPHLIQCLSDKKA
LVRSIACWTLSRYAHWVVSQPPDMHLKPLMTELLKRILDGNKRVQEAACSAFATLEEEAC
TELVPYLSYILDTLVFAFGKYQHKNLLILYDAIGTLADSVGHHLNQPEYIQKLMPPLIQK
WNELKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVTLVQKTLAQAMMYTQHPEQ
YEAPDKDFMIVALDLLSGLAEGLGGHVEQLVARSNIMTLLFQCMQDSMPEVRQSSFALLG
DLTKACFIHVKPCIAEFMPILGTNLNPEFISVCNNATWAIGEICMQMGAEMQPYVQMVLN
NLVEIINRPNTPKTLLENTGRLTSPSAIPAITIGRLGYVCPQEVAPMLQQFIRPWCTSLR
NIRDNEEKDSAFRGICMMIGVNPGGVVQDFIFFCDAVASWVSPKDDLRDMFYKILHGFKD
QVGEENWQQFSEQFPPLLKERLAAFYGV
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggactggcagccagatgagcagggcctgcagcaggtcctgcagctgctcaaagactcg
cagtcgccaaacacagccacgcagcgcatcgtgcaggataaactcaaacaactgaaccag
tttcccgacttcaacaactacctgatctttgtcctgaccagactcaagtcggaagacgag
ccgactcggtccctcagcggtctcattctcaagaacaacgtgaaggcacattaccagagc
tttccgccacccgtggccgacttcatcaaacaggagtgtctcaacaacattggcgatgcc
tcctcactcatccgagccaccataggcattctcatcaccaccatcgcttccaagggcgag
ctgcagatgtggcccgagctgctgccccagctgtgcaacctgctcaactcggaagattac
aacacttgtgagggggccttcggagccctgcagaagatctgcgaagactcatctgagctc
ctggacagcgatgccctcaacaggcccctcaacatcatgatccccaagttcttacagttc
ttcaagcactgcagcccaaagatccggtgggtgtggcttcccagggtgggggtgggggtc
tgcggaggggctgggcgggggcggagtcagggccgacccacgtgccccctccctgccagg
tcccatgccatagcctgtgtgaaccagttcatcatggaccgggcccaggcgctgatggac
aacatcgacaccttcatcgagcacctgttcgccctggccgtggacgacgaccctgaggtg
cggaagaacgtgtgccgtgccctggtgatgctgctggaagtgcggatcgacaggctcatc
ccccacatgcacagcatcatccagtacatgctgcagaggacccaggaccacgatgagaac
gtggctctggaggcctgtgagttctggctgacgctggccgagcagcccatctgcaaggaa
gtcctggcctcccacctggtccagttgatccccatcctggtaaacgggatgaagtactca
gaaatcgacatcattctgctcaagggggacgtggaagaggacgaggcggtccccgacagc
gagcaggacatcaagccacgtttccataagtcgcgcacagtgacgctgccccacgaggcc
gagcggcctgatggctcggaggacgcagaggacgatgacgacgacgatgctttgtccgac
tggaatctgaggaagtgctcggcagctgcactggacgtcctggccaacgtcttccgggag
gagctgctaccccaccttctccccctgctcaaggggctccttttccaccctgagtgggtg
gtcaaagagtcaggcatcctggtgctgggcgccatcgcggagggctgcatgcagggcatg
gtgccctacctgcccgagctgatcccgcacctcatccagtgcctgtcggacaagaaggcc
ctggtccgctccattgcctgctggacgctgagccgctatgcccactgggtggtcagtcag
ccacctgacatgcacctcaagcctctgatgacagagctgctcaagcgcatcctggatggc
aacaagagggtgcaggaggcggcctgcagtgccttcgccaccctggaggaggaggcctgc
acagagctggtgccctacctcagctatatcctcgacaccctcgtcttcgccttcggcaag
taccagcacaagaacctgctcatcctctacgacgccatcggcaccctggctgactctgtg
ggccaccacctcaaccagccggaatacatccagaagctgatgcctccgctgatccagaag
tggaacgagctcaaggacgaagacaaggacctcttccctctgctagagtgcctgtcatcg
gtggccaccgccctgcagagcggcttcctgccctactgtgagccagtctaccagcgctgc
gtcaccctggtgcagaagaccctggcccaggccatgatgtacacccagcaccctgagcag
tatgaggcccccgacaaggacttcatgatcgtggcactggacctgctcagcggcctggcc
gagggcctgggcggccacgtggaacagctggtggcccgcagcaacatcatgacgctgctc
ttccagtgcatgcaggactccatgcctgaggtccggcagagttccttcgccctcctggga
gatctcaccaaagcctgcttcatccacgtcaagccctgtatcgccgagttcatgcccatc
ctgggcaccaacctgaaccctgagttcatctctgtctgcaacaacgccacctgggccatc
ggcgagatctgcatgcagatgggggcagagatgcagccctacgtgcagatggtcctcaac
aacctggtggagatcatcaaccggcccaacacccccaagacgctactggaaaacacaggt
cgcctgacgagtccctctgccattccagccatcaccatcggccgcctgggctacgtgtgc
ccacaggaggtggcacccatgctgcagcagttcatccggccttggtgcacgtccctcagg
aacatcagggacaacgaggagaaggactcggccttccgaggcatctgcatgatgataggc
gtcaaccccgggggtgtcgtgcaggactttattttcttctgcgacgccgtggcttcctgg
gtgagcccgaaggatgaccttcgggacatgttttataagattctccacggcttcaaagac
caagtcggggaggagaactggcagcagttttctgagcagttcccgcctctgctcaaggag
aggctggccgccttctatggggtctag
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