Leopardus geoffroyi (Geoffroy's cat): 123605386
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Entry
123605386 CDS
T10761
Symbol
RFX1
Name
(RefSeq) MHC class II regulatory factor RFX1 isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lgf03000
]
123605386 (RFX1)
Transcription factors [BR:
lgf03000
]
Eukaryotic type
Other basic domains
RF-X
123605386 (RFX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
123605386
NCBI-ProteinID:
XP_045348163
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Position
A2:complement(9907958..9940521)
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AA seq
1105 aa
AA seq
DB search
MATPAYVTELQAAPQPSQPPQAQPQPPPPPAAAPQPPQPPAAAATPQPQYVTELQSPQPQ
AQPPGSQKQYVTELPATPTPSQPAGAPTPTPASQQYIVVTVSEGAMRASETVSEASPGST
ASQTGVPTQVVQQVQGTQQRLLVQTSVQAKPGHVSPLQLTNISVPQQALPTQRLVVQSTA
PGGKGGQVSLTVHGTQQVHSPPERSPGQANSSSSKTAGAPAGAVPQQLQVCGVQQSVPVT
QERSVVQATPQAPKAGPVQQLTVQGLQPVHVAQESSGSQFPARKAEQQEPRPTPPPEPPP
RPPTPGPRPSALAPEPPPLPPACRGEVWQLGSPQPPPPPHYEPGAEQWVELVGVMPPHLL
LPQQKVVFEPLPGLPARASPDQRVRIQRVPQVLVFGTAATALKVQQLQQVPVPHVYSSQV
QYVEGGDASYTASAIRSSTYPYPETPLYTQTAGASYYEAAGTAAQVSTPATSQAVASSGS
VPMYVSGSQVVTSSASSAGGASGGAGGTGGTGGGGGGGGGGGGGGGGSGGGGGSGAGTYV
IQGGYMLGSASQSYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEP
VNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKASSPLLRLMEDQQHMAMRGQPF
SQKQRLKPLQKMEGMTNGVAVGPQQAAGLSDISAQVQQYQQFLDASRSLPDFSELDLQGK
VLPEGVGPGDIKAFQVLYREHCEAIVDVMVNLQFTLVETLWKTFWRYNLSQPNEAPPLAV
HDEAEKRLPKASLVLLSKFEPVLQWTKHCDNVLYQGLVEILIPDVLRPIPSALTQAIRNF
AKSLESWLTHAMVNIPEEMLRVKVAAAGAFAQTLRRYTSLNHLAQAARAVLQNTAQINQM
LSDLNRVDFANVQEQASWVCRCEDRVVQRLEQDFKVTLQQQNSLEQWAAWLDGVVSQVLK
PYQGSAGFPKAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRV
AQAKGETPIAVMGEFANLTTSLNPLDPDKDEEEEEEEESEDELPQDISLAAGGESPALGP
DALEPPAKLARTDTRGLFVQALPSS
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaccagcgtacgttactgagctccaggcagccccacaaccatcccagccacca
caggcccagccccagccaccaccgccgccagcagcggcgccccagcccccccagccgcct
gccgccgcggctaccccccagccccaatatgtcactgagttgcagagcccccagccccag
gcacagccaccaggcagccagaagcagtatgtgacggagctcccggccacccccacgcct
tcgcagccggctggcgcccccaccccgaccccggcgtcccagcagtacatcgtggtcacc
gtctctgaaggcgccatgcgggccagtgagactgtatcagaagccagcccgggctccaca
gccagccagaccggagtccccactcaggtggttcagcaggtgcagggcacccagcagcgt
ctgctggtccagacaagtgtgcaggccaagccgggccacgtgtctcccctccagctcacc
aacatctcagtgccccagcaggctctccccacgcagcgtctggtggtgcagagcacggcc
ccaggcggcaagggtggccaggtttccctgacagtgcatggcacccagcaggtgcactcg
ccccctgagcggtcgccggggcaggcaaacagctcctccagcaagacggctggggccccc
gcgggtgcagtgccgcagcagctgcaggtctgtggcgttcagcagagtgtccccgtcacc
caagagaggtccgtggtccaagccactccacaggcgcccaaagccggccccgtgcagcaa
cttacggtgcaggggctccagccagttcacgtggctcaagagagctcaggcagtcagttt
cccgctaggaaggcagagcagcaggagccccggcccacgccgccgccggagccgccgccc
cggccacccacgcccgggccccggccgagcgcgctggccccggagccgccgccgctcccg
cccgcgtgcaggggcgaggtctggcagctaggcagcccccagccgccgccgccgccccat
tacgagccgggcgccgagcagtgggtggagctggtgggcgtgatgcccccgcacctgctc
ctgccgcagcagaaagtggtcttcgagccactgcccgggctcccggcccgagccagcccc
gaccagagggtcaggatccagagagtcccccaggtgctagtgttcggcacggccgccacg
gccctcaaagtgcagcagctccagcaggtgcccgtcccacacgtgtactccagccaagtg
cagtatgtggagggtggtgacgccagctacacggccagtgccatccgctccagtacctac
ccctacccggagacgccgctgtacacgcagacagcgggcgcaagctactacgaagctgca
ggcacagctgcgcaggtcagcacgcccgctacctcccaggcggtggccagcagcggctct
gtgcccatgtacgtgtccgggagccaggtcgtcaccagctccgccagcagcgcgggtggg
gccagcggcggcgccggcggcaccggcggcaccggcgggggcggcggtggcggtggcggg
ggcggcggcggcggcggcggcagtggcggcggcggcggcagcggagcaggcacctatgtg
atccagggcggctacatgctgggcagcgccagccagtcctactcccacaccacgcgtgcc
tcgccagccaccgttcagtggctcctagacaactatgagacggccgagggtgtgagcctg
ccacggagcaccctctactgccactacctgctgcactgccaggagcagaagctggagccc
gtcaatgccgcctccttcggcaagctcatccgctccgtgttcatgggcctgcgcacccga
cggctgggcaccaggggcaactccaaataccactactacggcctgcggatcaaggccagc
tcgcccctgctgcggctgatggaggaccagcagcacatggccatgcggggccagcccttc
tcgcagaagcagaggctcaagcccctccagaagatggagggcatgacgaacggcgtggct
gtggggccgcagcaggccgcggggctgtcggacatcagcgcgcaggtgcagcagtaccag
cagtttctggatgcctcgaggagtctccctgacttctcagagcttgacctccagggcaaa
gtgctccccgagggcgtcgggcctggggacatcaaggccttccaggtcctgtaccgggaa
cactgtgaggccattgtcgacgtcatggtgaacctgcagttcaccctggtggagacgctg
tggaaaaccttctggaggtacaacctcagccagcccaacgaggcgcctccgctggccgtg
cacgacgaggctgagaagcggctgcccaaggccagcctggtgctcctctccaagtttgag
ccagtgctgcagtggaccaagcactgtgacaacgtgctgtaccagggcctggtggagatc
ctcatccctgacgtgctgcggcccatccccagtgccttgacccaagcgatccggaacttt
gccaagagcctggagagctggctcacccacgccatggtgaacatcccagaggagatgctg
cgtgtgaaggtggcggcggccggtgccttcgcgcagacgctgcgacgctacacgtcgctc
aaccacttggcgcaggcggcgcgggcagtgctgcagaacaccgcgcagatcaaccagatg
ctgagcgacctcaaccgcgtggacttcgccaacgtgcaggagcaggcctcgtgggtatgc
cgctgcgaggaccgcgtggtgcagcgtctggagcaggacttcaaggtgaccctgcagcag
cagaactcactggaacagtgggcggcctggcttgacggcgtcgtgagccaggtgcttaaa
ccctaccagggcagcgccggcttccccaaggccgccaagctcttcctccttaagtggtcc
ttctacagctccatggtgatccgggacctgaccctgcgcagcgctgccagctttgggtct
ttccacctcatccggctgctctacgacgagtacatgtactacctgatcgagcaccgcgtg
gcccaggccaagggcgagacccccatcgccgtcatgggcgagttcgccaacctgaccacc
tcgctgaacccccttgacccggacaaagacgaggaggaggaagaggaggaggagagcgag
gacgagctgccacaggacatctcactggcggccggcggagagtcacccgctctgggcccg
gacgccctggagccgccggccaagttggcaaggacagacacacggggcctcttcgtgcag
gcgctgccctccagctaa
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