Leopardus geoffroyi (Geoffroy's cat): 123605549
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Entry
123605549 CDS
T10761
Symbol
EXOSC7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123605549 (EXOSC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lgf03019
]
123605549 (EXOSC7)
Messenger RNA biogenesis [BR:
lgf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
123605549 (EXOSC7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
123605549 (EXOSC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
123605549
NCBI-ProteinID:
XP_045348546
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Position
A2:14920632..14959197
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AA seq
369 aa
AA seq
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MAPRHEAPRLPGLVQTRGGAQEKPIELPAVAAAAVAAGAAAAPADDAQAHGLGGGVGGAA
GAGATRADDVRRTGRLGSMASVALSEAEKVYIVHGVQEDLRVDGRGCEDYRCVEVETDVV
SNTSGSARVKLGHTDILVGVKAEMGTPKLEKPNEGYLEFFVDCSANATPEFEGRGGDDLG
TEIANTLYRIFNNKSSVDLKSLCISPREHCWILYVDVLLLECGGNLFDTISIAVKAALFN
TRIPRVRVLEDEEGSKDIELSDDPYDCIRLSVENVPCIVTLCKIGYRHVVDATLQEEACS
LASLLVSVTSKGVVTCMRKVGKGSLDPESIFEMMETGKRVGKVLHASLQSILHKEESLGP
KRQKVGFLG
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggctccccggcacgaggcgccgcggcttcctggactcgtccagacacggggcggcgcg
caggagaagcccatcgagctgccggcggtggcggcagcagcggtggctgcaggagcggcc
gccgcgccggctgatgacgcacaagcgcatgggttgggggggggggtggggggcgcggcc
ggcgcgggagcgacgcgagccgatgacgtgcggcgaacggggcggctcggcagcatggcg
tccgtggcgctgagcgaggccgagaaggtgtatatcgtgcacggcgttcaggaagacctc
cgtgtggacggccgtggctgtgaggactaccgatgtgtcgaagtggaaaccgacgtggtg
tccaacaccagtgggtctgccagggtcaagctgggtcacacagacatcttggtgggagtg
aaagccgaaatggggacgccgaagctggagaaaccaaatgaagggtacttggagttcttc
gttgactgttcagccaacgctactcctgaatttgaaggccggggaggtgatgaccttggc
acggagattgctaacaccctctaccggatatttaacaataagagcagcgttgacctgaag
tccctctgcatcagtccccgggagcactgctggattctctatgtggacgtgctgctgctg
gaatgtggcgggaatttgttcgacaccatctccattgctgtaaaggctgctctcttcaat
acaaggataccaagagttcgggttctagaggatgaagaggggtccaaggatattgaactc
tcggatgacccttatgactgcatccggctaagtgtggagaatgtcccctgcattgtcacc
ctgtgcaagattggctaccggcacgtagtggatgctactctccaggaggaggcctgctcc
ttggccagcttgctggtgtccgtgaccagcaagggagtcgtgacatgcatgaggaaagtg
gggaagggcagcctggacccagagagcatcttcgagatgatggagactggcaagcgagtg
ggcaaggtgctgcacgcctccctgcagagcattctacacaaggaggaaagcctggggccc
aagagacagaaagtcggattcctgggatga
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