Leopardus geoffroyi (Geoffroy's cat): 123605617
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Entry
123605617 CDS
T10761
Symbol
DHX30
Name
(RefSeq) ATP-dependent RNA helicase DHX30 isoform X1
KO
K13185
ATP-dependent RNA helicase DHX30 [EC:
5.6.2.6
]
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lgf03041
]
123605617 (DHX30)
03029 Mitochondrial biogenesis [BR:
lgf03029
]
123605617 (DHX30)
Enzymes [BR:
lgf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123605617 (DHX30)
Spliceosome [BR:
lgf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
123605617 (DHX30)
Mitochondrial biogenesis [BR:
lgf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
123605617 (DHX30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSRM_2
Helicase_C
DEAD
HA2_C
OB_NTP_bind
dsrm
nSTAND3
Dicer_dimer
AAA_19
AAA_22
AAA_16
HA2_N
AAA_23
Motif
Other DBs
NCBI-GeneID:
123605617
NCBI-ProteinID:
XP_045348726
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All DBs
Position
A2:17235480..17265910
Genome browser
AA seq
1284 aa
AA seq
DB search
MDLKDSAPGFQLSLLARNVQPGLIQKRSGPAQAASVQTSPTPPSTHVCQPCPWRDHLSRL
NVNISNMAAFRNHSFQNLASAPNAMTSLASRDLLKEFPQPKNLLNSVIGRALGISHAKDK
LVYVHTNGPKKKKVTLHIKWPKSVEVEGYGSKKIDAERQAAAAACQLFKGWGLLGPRNEL
FDAAKYRVLADRFGSPADSWWRPEPTMPPTSWRQLNPESIRPGGPGGLSRSLGREEEEDE
EEELEEGTIDVTDFLSMAQQDSHTPLRDSRGGSFEMTDDDSAIRALTQFPLPKNLLAKVI
QIATSSSTAKNLMQFHTVGTKTKLSTLTLLWPCPMTFVAKGRRKAEAENKAAALACKKLK
SLGLVDRNNEPLTHAMYNLASLRELGETQRRPCTIQVPEPILRKIETFLNHYPVDSSWIT
PELRLQSDDVLPLGKDSGPLSDPITGKPYVPLSEAEEVRLSQNLLELWRRRGPVWQEAPQ
LPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRR
ISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLRKLQSNPSLEGV
SHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGGCPVIKVPG
FMYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILC
FLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNI
AETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYH
LFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVI
LLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLTRDPFSS
SLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLR
FIHGQWASPRLQPLPAHTPLAEAPRSVSSPSLVASGAAGSPAPNSPGLIKQFSENIYEAF
LVGKPSDCTLASAQCNEYSEEEELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRT
KSGNILLHKSTINREATRLRSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDVHIR
DDGRRATISLSDSDLLRLEGDSRTVRLLRELRRALGRMVERSLRSELAALPPGVQQEHGQ
LLALLAELLRGPCGSFDVRKTADD
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggacctgaaagattcggccccaggattccagctttccctcctggccagaaatgttcag
cctggactcattcagaaaagatcgggcccagcacaggcagcgtcagtgcaaacttccccc
accccgccttccacccatgtgtgtcaaccctgcccctggagggaccatctctcgaggctg
aacgttaacatttccaacatggcagctttcagaaaccacagttttcaaaatttggcctca
gcccctaatgccatgaccagtcttgcttctagggacctattaaaagagttcccacagccc
aaaaaccttctcaacagtgtaattggaagagccctcggcatctcacatgcaaaagacaaa
ttggtctacgtgcacacgaatggaccgaagaaaaagaaagtcaccctccacataaagtgg
cccaagagcgtggaggtagaaggctatggcagcaagaagatcgacgctgagcgacaggct
gcggccgcggcctgccagctgttcaagggctggggcctgctgggtccccgaaacgagctg
tttgatgcagccaaatatcgtgtgctagccgatcgctttggctctccggctgacagctgg
tggcgcccagaacccaccatgccacctacttcctggcggcagctgaatcccgagagcatc
cggccagggggacctgggggcctgtcccgctccttgggccgggaggaagaggaggatgag
gaggaagagctagaagaggggaccattgatgtcaccgacttcctgtccatggcccagcag
gactcccacaccccactcagggactcgagggggggttcctttgaaatgacagacgacgac
agtgctattagggctctgacccagtttccacttcccaagaaccttctggccaaagtgatt
cagatagcaacatcgtcctccacagctaagaacctcatgcagtttcatactgtgggcacc
aagaccaagctgtctaccctcactctgctttggccctgtcctatgacctttgtcgccaaa
gggcgccgcaaagcggaggctgagaataaggcagcagccctggcctgcaagaaactgaag
agcctgggcctggtggaccgcaacaacgagccgctcacccacgccatgtataacctggcc
tccttgcgtgagctgggtgagacccagcgccggccgtgtaccatccaggtgcctgagccc
atcctccgcaagatagaaaccttcctgaaccattaccctgtggatagttcatggatcacc
ccagaactccggctgcagagtgatgacgtcttgcccttgggcaaggactcggggcccctg
agtgaccctatcacaggcaagccctacgtgcccctgtcagaagcagaggaggtccgtctg
agccagaacttgctggagctgtggcggcggcgagggccagtctggcaggaggccccccag
ctccctgtggacccgcatcgggacacaatcctcaatgccattgagcagcacccggtggtg
gtcatctctggggacacgggctgcggaaagaccacacgcatcccccagctgctgctagag
cgctatgtgaccgagggccgcggtgcccgctgcaacgtgatcatcacccagccgcgccgc
atctccgctgtgtcggtggcacagcgggtcagccacgaactgggcccctctctgcgccgg
aacgtgggcttccaggtgcggttggaaagcaagcccccggcccgaggcggggccttgctc
ttctgcaccgtgggcatcctgctgcggaagctgcagagcaaccccagcctggagggcgtg
agccatgtcatcgtggacgaggtccatgagcgggacgtgaatacagacttcctgcttatt
ttgctcaagggcctgcagcggctcaacccggccctgcggctggtgctcatgagcgccacg
ggcgataacgagcgcttctcccgctactttggtggctgccctgtcatcaaggtgccaggc
ttcatgtaccccgtcaaggagcactacctggaggacattctggccaagctgggcaagcac
cagtacccgcaccggcaccggcaccacgagtctgaggatgaatgtgcacttgacttggac
ctcgtgacggacctggttctgcacattgatgcccgaggggaaccaggtgggatcctctgc
ttcctgcctgggtggcaggagatcaaaggagtgcagcaacgccttcaggaggccctgggc
atgcacgagagcaagtacctgatcctgccagtgcactccaacatccccatgatggaccag
aaggccatatttcagcagccgccagttggggtgcgcaagatcgtcttggccaccaatatc
gcggagacctcaattacagtcaatgacattgtgcacgtggtggacagcggtctgcacaag
gaggaacgctatgacctgaagaccaaggtgtcctgcctggagactgtgtgggtgtcacga
gccaatgtgatccagcgccggggccgggcaggccgctgccagtcaggctttgcctaccac
ctattcccacggagccggctggagaaaatggtccctttccaagtgccggagattctgcgc
acgccccttgagaacctggtgctacaagccaaaatccacatgcccgagaagacggcagtg
gaattcctttccaaggctgtggacagtccgaacattaaggcagtggatgaggccgtaatc
ttgctccaggagatcggagtgctggaccagcgggagtacctgaccaccctggggcagcgc
ctggcccatatctccaccgacccccggctggccaaggccatagtgctggctgccatcttc
cgctgcctgcacccactgctggtggtcgtttcctgcctcacccgggaccccttcagcagt
agcctgcagaaccgggcggaggtggacaaggtgaaggcgctgttgagccacgacagtggc
agcgaccacctggccttcgtgcgggccgtggccggctgggaggaggtgctgcgctggcag
gaccgcagctcccgggagaactacctggaggagaacctgctgtacgcacccagcctgcgc
ttcatccacggtcagtgggcttcaccccgtctccagcccctcccggcccacacccccctg
gctgaggcaccacggagcgtgtcgtcccccagcctcgtggcttcgggggccgcaggctca
cccgcccccaactccccaggactcatcaagcagttctcagagaacatttatgaggctttc
ctggtgggaaagccctcggactgcaccctggcttctgcccagtgcaacgagtacagtgag
gaggaggagctggtgaagggcgtactgatggccggcctctaccccaacctcatccaggtg
aggcagggcaaggtgacccggcagggcaagttcaagcccaacagcgtcacatacaggacc
aaatcaggcaacatcttgctgcataagtcgaccatcaacagggaggccacgcggctccgg
agccgatggctgacgtacttcatggccgtcaagtccaatggcagcgtcttcgtccgggac
tcctcccaggtgcacccgctggccgtgctgctgctgacagacggggacgtccacatacgt
gatgatgggcgccgggccaccatctccctgagtgacagtgacctgctgaggctggagggg
gattcccgcaccgtgcggctgctgagggagctgcgccgggccctgggccgcatggtggag
cggagcctgcgcagtgagctggccgcactcccgcccggcgtgcagcaggagcacgggcag
ctgctcgccctgctggcggagctgttgcgtgggccctgtggcagctttgacgtgcgcaag
acagccgatgactga
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