Leopardus geoffroyi (Geoffroy's cat): 123605636
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Entry
123605636 CDS
T10761
Symbol
COL7A1
Name
(RefSeq) collagen alpha-1(VII) chain isoform X1
KO
K16628
collagen type VII alpha
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04382
Cornified envelope formation
lgf04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
123605636 (COL7A1)
09158 Development and regeneration
04382 Cornified envelope formation
123605636 (COL7A1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
fn3
VWA
VWA_2
Pur_ac_phosph_N
Kunitz_BPTI
DUF4992
Motif
Other DBs
NCBI-GeneID:
123605636
NCBI-ProteinID:
XP_045348798
LinkDB
All DBs
Position
A2:complement(17822476..17853486)
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AA seq
2938 aa
AA seq
DB search
MRLPLLVAALCAGILAGALRVRAQQKERVTCTRLYAADIVFLLDGSSSIGRGNFREVRGF
LEGLVLPFSGAASAQGVRFAAVQYSDDPRTEFGLDALGSGSGGEVIRAIRELSYKGGNTR
TGAAILHVADHIFLPQLARPGVPKVCILITDGKSQDLVDTAAQRLKGQGVKLFAVGIKNA
DPEELKRVASQPTSDFFFFVNDFSILRTLLPLVSRRVCTTAGGVPVTLPTDDLTSGPRDL
VLSEAGSQSLRVRWTAASGPVTGYKVQYAPLTGLGQPLPGERREVSIPAGETSTQLQGLR
PLTEYQVTVVALYANSIGEAVSGTARTTALEGPELTIQNTTAHSLLVAWRSVPGATGYRV
TWRVLSGGVTQQQELGPGQGSVLLRDLEPGTDYEVTVSTLLGRSVGSAASLTARTDASVE
QTLRPVILGPTSILLSWNLVPEARGYRLEWRRESGLGVPQKVVLPSDVTRYQLDGLQPGT
EYRLTLYTLLEGREVATPATVVPTGPELPVGPVTDLKATELPGQRVRVSWSPVPGATEYR
ITVRSTQGVERTLVLPGSQTAFDLDDVRAGLSYTVRVSARVGSREGGASTLTVRREPETP
LAIPGLRVVASDATRVRVAWGPVPGASGFRISWRTDSGPESSQTLPPESTATDIMGLRPG
TSYQVAVSALRGREEGPPVVIVARTDPLGPVRTVHVTQTSSSSVTISWNGVPGATGYRVS
WHSGHGPEKSQLVSGEATVAELDGLEPDTEYTVHVWPHVAGVDGTPASVVVRTDPAPVGS
VSKLQILNASSDVLRVTWVGVTGATAYRLAWGRSEGGPTRQQMLPGNTDSAVIRGLEGGV
SYSVRVTALVGDREGAPVSIVVTTPPEAPPALETLRVVQRGEHSLSLRWQPVPGAHGFRL
RWRPEGGQEQSRVLGPGISSYELDGLESATPYRVWLSVLGSAGEGPPTEVIARTESPRVP
STELRVVDTSIDSVTLAWTPVSGVSSYILSWQPLRRPGQDIPGASQTLPGISNSQQVTGL
EPGISYTFSLTPIREGIRGPEASVTQNPVCPHGQMDVVFLLHTTQDNAHRAEAVKRALER
LVSALGPLGPQAIQVGLLSYSHRPSPLFPLNSSYDPNIILQKIRSIPYMDPSGNNLGTAV
VTAHRHLLAPDAPGRRQHVPGVMVLLVDEPLRGDIFNPIREAQAAGLRVMILGQAGADPE
QLRRLVPGMDPVQTFFAVDDGPSLDRAVSGLATSLCQTALATQSQPEPCTLHCPKGQKGE
RGEMGLKGQAGPPGPPGLPGRAGAPGPPGPPGSTIAKGERGFPGADGPPGSPGRPGTPGT
PGSKGSPGWPGPRGDPGERGPRGPKGEPGDPGRVIGGEGPGLPGQKGDPGPPGLPGSRGP
LGDPGPRGPPGLPGTTVKGDKGDRGERGPPGPGDGGTVPGEPGLPGLPGGPGPQGPVGPS
GEKGEKGDCEDGAPGLPGQPGSPGERGPRGPPGDIGPKGDRGLKGAVGEIGEKGERGPPG
PVGPQGLPGVAGRPGAEGPEGPPGPTGRRGEKGEPGRPGDPAVGPDGAGAKGEKGDVGPT
GPRGATGVKGERGPPGLVLQGDPGPKGDPGDRGPIGLTGRAGPPGDSGPPGEKGDPGRPG
PPGLVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGARGPVGEKGDQGDPGEDG
RNGSPGPSGPKGDRGEPGLPGPPARLVDMGVGAGEKGEPGDRGQEGPRGPKGDPGPPGAA
GERGISGLRGPPGPQGDPGVRGPTGEKGDRGSPGLDGRSGLDGKPGAPGPPGQHGAAGKA
GDPGRDGLPGLRGEHGPPGPSGPPGAQGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDS
GTPGREGHEGPKGERGAPGSPGLQGPPGLPGQVGPSGQGFPGVPGNTGPKGDRGESGPKG
EQGLPGERGLRGEPGSVGNVERLLETIGIKTSALREIVETWDESSGSFLPLPDRRRGPKG
DPGERGPPGKEGPIGFSGERGLKGDRGDPGPQGPPGLALGERGPPGPPGLAGEPGKPGIP
GLPGRAGDAGEAGRPGERGERGEKGERGEQGRDGPPGLPGPPGPPGPKVAVDELGPGFSG
VQGPPGLKGTKGDPGSDGDRGPKGDKGVPGIKGDRGEPGQRGLDGSPGLPGERGVAGPEG
KPGLQGPRGTPGPVGGHGDPGPPGAPGLAGSTGPQGPSGLKGEPGETGPPGRGLPGPTGA
VGLPGPPGPSGLVGPQGAPGLPGQVGETGKPGAPGRDGASGKDGDRGAPGVPGSPGLPGP
VGPKGEPGPMGAPGQAVVGPPGTKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAG
RAGEPGDPGEDGQKGAPGLKGNKGDPGIGVQGPLGPAGPPGLKGDAGPPGPPGAPGVVGF
PGQTGLRGEMGQPGPSGERGLAGLPGREGAPGPLGPPGPPGSAGVPGPSGLKGDKGDPGA
GLPGARGERGEPGVRGEDGRPGQEGPRGLTGPPGSRGERGEKGDTGTTGLKGDKGDAAMA
VGPPGPRGAKGDMGERGPRGIDGDKGPRGDTGNPGEKGTKGEPGDKGSTGLLGARGLTGP
KGEPGAAGIPGDPGSPGKDGTPGIRGDKGDIGFMGPRGLKGERGIKGACGLDGEKGDKGE
AGPPGRPGLAGRKGDVGEPGMPGQSGTPGKEGLIGPKGDRGFDGQPGSKGDQGEKGERGP
PGIGGFPGPRGNDGSSGPPGPPGSVGPKGPEGLQGQKGERGPPGERVVGAPGAPGAPGER
GEQGRPGPAGPRGEKGEAALTEDDIRGFVRQEMSQHCACQGQFIASGSRPLPSYAADTAS
PQLHPVPVLRVSHAEEEGEVPPEDDEYEYSEYSVEEYQDPEVLQDGDDPCLLPLDEGSCT
AYTLRWYHRAVAGGTDACHPFVYGGCGGNANRFGTREACERRCMPRMVQSQVTGAARS
NT seq
8817 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgccgctcctggtggccgcgctctgcgccgggatcctggcaggggcgctccga
gtgcgggcccaacagaaggagagagtgacctgcactcgcctttatgctgctgacatcgtg
ttcctacttgatggctcttcgtctatcggccgtggcaacttccgtgaagtgcgtggtttc
ctggagggactggtgcttccattctctggggcagccagtgcacaaggtgtgcgctttgct
gctgtgcagtatagcgacgatccacggacggagtttggcctcgatgcacttggctcaggc
tcagggggcgaggtgatccgagccatccgtgagctcagctacaaggggggcaacacgcgc
acgggggctgcaattctccacgtggctgaccacattttcctgccccagctggcccgacct
ggtgtccccaaggtctgcatcctcatcacagatgggaagtcgcaggacctggtggatacg
gctgcccagcggctgaaggggcagggggtcaagctgtttgctgtgggcatcaagaatgcc
gaccccgaggagctgaagcgagttgcctcacagccgaccagtgatttcttcttcttcgtc
aacgacttcagtatcttgaggacactgctgccccttgtttcccggagagtgtgcacaact
gctggtggtgtacctgtgaccttgcccactgatgacttgacatctgggccacgagacctg
gtgctgtccgaagcaggcagtcaatccttgagagtacggtggacggcggccagtggccct
gtgactggctacaaggtccagtatgctcctctgacagggctgggacagccactgccaggc
gagcggcgggaggtgagcatcccagctggtgagaccagcacacagctgcagggtctccgg
ccactgactgagtaccaagtgaccgtggtagccctctacgccaacagcatcggggaggct
gtgagcgggacagctcggaccactgccctggaggggccagagctgaccatccagaatacc
acagcccacagcctcctggtggcctggcggagtgtgccaggtgccactggctaccgtgtg
acatggcgggtcctcagtggtggtgtcacacagcagcaggagctgggccctgggcagggg
tcagtgttgctgcgtgacctggagcctggcacggactacgaggtgactgtgagcaccctg
ctcggccgtagcgtaggatctgccgcctccctgactgcccgtactgacgcttccgttgaa
cagaccctgcgcccagtcatcctggggcccacatccattctcctttcctggaacttggtg
cctgaggcccgcggctaccggctagaatggcggcgtgagagtggcttgggggtgccacag
aaggtggtactgccctctgatgtgacccgctaccagttggatgggctgcaaccaggcact
gaatatcgcctcacgctctatactctgctggagggccgcgaggtagccacgcctgcaact
gtggtccctaccgggccagagctgcccgtgggccctgtgacggacttgaaggcaaccgag
cttcctgggcagcgggtgcgagtatcctggagcccggtccccggtgccaccgagtaccgc
atcactgtgcgcagcacacagggggttgagcggaccctcgtgcttcctgggagtcaaaca
gcctttgacttggatgatgtccgggctggcctaagctacactgtgcgggtgtctgctcga
gtgggcagccgtgagggcggtgccagcaccctcactgtccgccgggaaccggaaacccca
cttgccatcccagggctacgagttgtggcatcagatgcaacacgggtgagggtggcctgg
ggacctgttcctggagccagtggatttcggattagctggaggacagacagtggtccggag
tccagccagacattgcccccagaatccactgccacagatatcatggggctacggcctgga
acctcctaccaggtggctgtgtcagcactgcgagggagagaggagggtccccctgtggtc
atcgtggctcgcactgacccactaggcccagtgaggactgttcatgtgacgcagaccagc
agctcatctgtcaccatctcctggaacggggttcctggtgccacgggatacagggtctcc
tggcactcaggccatggcccagagaaatcccagttggtttctggagaggccacagtggct
gagctggatgggctggagccagatacggagtacacggtgcatgtgtggcctcatgtggcc
ggtgtggatgggacacccgcctctgtggttgtgaggacagaccctgcgcccgtgggcagt
gtgtcgaagctgcagatcctcaatgcctccagtgatgttctgcgggtcacctgggtcggg
gtcactggagccacagcctacagactggcctggggccggagcgagggtggccccacaaga
cagcagatgctcccaggaaacacggactccgccgtaatacggggcctcgaaggcggagtc
agctactcggtgcgagtgactgctcttgtgggggaccgtgagggagcaccggtctccatt
gtcgtcaccacgccgcctgaggctccgccagccctggagacccttcgcgtagtgcagcga
ggcgagcactcgctgagtctgcgctggcagccggtgccgggggcacacggcttccgtctg
cgttggcgacccgagggtggccaggaacagtcccgggtcttggggcccggtatcagcagc
tatgaactggatgggctggaatccgcaaccccataccgagtgtggctgagcgttttgggg
tcagctggagaagggccccccacagaagtgattgcacgcactgagtcaccccgggtgcca
agcactgaactgcgtgtggtggacacttcaattgactcagtgactctggcctggacccca
gtgtctggagtatccagctatattctgtcctggcagccgctcagacgccctggccaagac
atccctggggcctcacagacacttccagggatctcgaactcccagcaggtgacagggcta
gaacctggcatctcctataccttctcgttgacaccgatccgggagggtatacggggtcct
gaggcctctgtcacacagaacccagtgtgtccccatggccagatggatgtggtgttcctg
ctgcacaccactcaggacaatgctcatcgtgcagaggccgtaaagcgagccctggagcgt
ctggtgtctgcgcttgggcctcttgggccacaggcaatccaggttggcctcctgtcctac
agtcatcggccctccccactgttcccactgaatagctcctatgatcctaacatcatcctg
cagaagatccgcagcatcccttacatggacccaagtgggaacaacctgggcacagctgtg
gttactgctcacagacacctattagcaccagatgctcccgggcgccgccagcatgtacca
ggggtaatggttttgctagtagatgagcccttgagaggtgacatcttcaaccctatccgt
gaggcccaggctgctgggctcagagtgatgatactgggccaggctggagctgacccggaa
cagttgcgtcgcttggtgccaggcatggaccctgtccagactttctttgctgtggatgac
ggtccaagcttggaccgggcagtcagtggtttggcaacatccctgtgtcagacagccttg
gccactcagtcacagccagagccttgcacattgcattgtccaaagggtcagaaaggggaa
cgtggagagatgggcctgaaaggacaagccgggcctcctggcccccccggcctcccggga
agggctggtgctcctggacccccagggcctcctggaagtaccattgcaaagggtgagagg
ggctttcctggggcagatgggcctccaggcagccctggccgccctgggactcctggaacc
cctggctccaagggctctccagggtggcctggccctcgtggagatccaggagagcgagga
cctcgaggcccaaagggggagccgggagatcccgggcgagtcattggaggcgaaggccca
gggcttcctgggcagaaaggggaccctggacctccaggcctccctggatcccgtggccca
ctgggggacccaggaccccgtggtcccccaggacttcctggaacgactgtgaagggtgac
aaaggcgatcgtggggagcggggccccccaggaccaggtgatggtggcactgttccaggg
gagcctgggctgccgggtcttcctggaggccctggaccccaaggcccagttggcccctct
ggagagaaaggagaaaagggtgactgtgaggatggagccccaggcctcccaggacaacct
gggagcccgggtgagcggggcccacgaggacctcctggggacattggccccaaaggtgac
cgaggactgaaaggggctgtgggtgagattggcgagaagggtgaacgtggaccccccggc
ccagtgggaccgcaggggctacctggagtggctggacgtccaggagctgaggggcccgaa
gggccgccaggacccaccggccgcagaggagagaagggggagcctggtcgccctggggac
cctgcagtgggacctgatggtgctggagccaaaggagagaagggagatgtggggcccacg
gggcctagaggagctacaggagtcaaaggggagcggggcccgcctggcttggttcttcag
ggagaccctggccccaaaggagaccctggagaccggggtcccattggcctgacaggcaga
gcaggacccccgggtgactcgggacctcctggagagaagggagaccctgggcggcctggc
cccccaggactcgtcggcccccgaggacgagatggtgaagttggagagaaaggtgatgaa
ggtcccccgggtgacccaggtttgcctggaaaagctggcgaacgtggccttcggggggca
cctggagctcggggacctgtgggtgagaagggagaccaaggagatcctggagaggatgga
cgaaacggcagccctggaccatctggacccaagggtgaccgtggggagccgggtcttccg
ggaccccctgcacggctggtagacatgggagttggagctggagagaagggagagccgggg
gatcgtggacaggagggtcctcgaggacccaagggtgacccaggcccccctggagctgct
ggggagaggggcatcagtggactccgggggcccccaggccctcagggggacccaggtgtc
cgaggcccaacaggagagaagggtgaccggggttcacctggcctggatggccgcagtggg
cttgatggtaaaccaggagcccctggcccccctgggcagcatggtgctgcaggcaaagct
ggagacccagggagagacgggcttccaggcctccgaggagaacacggaccccctggcccg
tctggcccccctggagcccagggaaaaccaggagaggatggcaagcctggcctgaatggg
aaaaatggggaacctggggaccctggagaagatggaaggaagggagagaagggagattca
ggcacccctgggagagaaggccacgagggtcccaagggtgagcgtggagctcctggtagc
cctggactccagggtcccccaggcctccctgggcaggtgggcccttctggccagggtttt
cctggggttccaggaaacacaggccccaagggtgaccgtggggagagtggacccaaaggg
gaacagggccttccaggagaacgtggcctgagaggagaacctgggagcgtggggaatgtg
gagcggttgctggaaacaattggcatcaagacatctgccctgcgagagatcgtggagacc
tgggatgagagctccggcagcttcctgcccttgcctgaccggcgccgtggtcctaagggg
gacccaggcgagcggggccccccaggcaaggagggacccattggcttttctggagaacgt
gggctgaagggagatcgtggagaccctggccctcaggggccaccaggcctggctcttggg
gaaaggggcccccctggacctcccggccttgccggggagcctggaaagcctggtattcct
gggctcccaggccgggctggggacgcaggggaggcaggaaggccaggagagaggggagaa
cgaggagagaaaggagaacgtggggaacagggcagagatggccctcctggcctccctgga
cctcccggccctcctggccccaaggtggctgtggatgagctaggtcctggattctctgga
gtgcaaggaccccctggactcaaaggcactaagggggatccaggcagtgacggcgaccga
ggccccaagggagacaagggtgtgccaggcatcaagggagaccggggagagcctggacag
aggggtcttgatggcagcccgggtctaccaggagagcgtggtgtggctgggcctgaaggg
aagccgggtttgcaaggtccaagggggacccctggcccagtgggtggccacggagaccct
ggacctcctggtgccccgggccttgctggctccacaggaccccagggtccttctggcctg
aagggggagcctggagagacaggaccaccaggacggggcctgcccggacccactggggct
gtgggacttcctggccctcctggcccttcaggcctcgtgggtcctcaaggggcaccgggt
ctgcctggacaagtgggggagacagggaagccgggagccccaggtcgtgatggtgccagt
ggcaaagatggagacagaggagctcctggtgtgccggggtcgccaggtctgcccggccct
gttggacctaaaggagagcctggacccatgggggctcctggacaggctgtggtcgggccc
cctggaacaaagggagagaagggagcccccggaggccttgctggagacctggtgggagag
ccgggagccaaaggtgatcgaggactgccagggcctcggggcgagaagggtgaagctggc
cgtgcaggggagcctggagaccctggggaagatggtcaaaaaggggctcctggactcaag
ggtaataagggtgacccaggaatcggggtccagggcccccttgggccagctggtcctcca
ggtctgaagggagatgcgggcccccctgggccccctggtgctcctggtgttgtcggattc
cccggtcagacaggccttcgtggagagatgggtcagccaggccccagtggagagcggggt
ctggcaggtctcccggggagagagggagccccaggtcccttggggccacctggaccacca
gggtcagcgggagtgcccgggccctctggactcaaaggagacaagggagaccctggagca
gggctgcccggggcccgaggcgagcgtggggaacctggtgtccggggtgaagacggccgt
cccggccaggagggaccccgaggactcacggggcccccgggcagccggggggaacgtggg
gagaagggtgacactggaactacagggctaaagggtgacaagggtgatgcagccatggct
gtggggcctccagggccacggggtgccaaaggggacatgggcgaacgagggcctcggggc
atagatggtgacaaaggacctcgaggagacactgggaaccctggagagaagggcaccaag
ggagagcctggtgacaagggctcaaccgggttgctgggagctcgtggactcacaggaccc
aagggtgaacctggtgctgcagggatcccaggtgacccgggatcaccaggaaaggatgga
acccctggtatccgaggcgacaaaggagatattggcttcatgggtccccggggcctcaag
ggtgaacgagggataaagggggcctgtggccttgacggagagaagggagataagggagaa
gctggtccccctggccgccctgggctggcaggacgcaagggagatgtgggggagccgggt
atgccgggccagtcggggacccctggaaaggagggcctgattggtcccaagggtgatcga
ggctttgatgggcagccaggatccaagggtgaccagggtgagaaaggggagcgggggccc
ccaggaattgggggcttcccaggtcccaggggcaatgatggctctagtggcccccctggg
ccacctggcagtgttggtcccaaaggccctgaaggacttcagggccagaagggtgagcga
ggtccccctggagagagagtggtgggtgcccctggggcccctggggcccctggagagaga
ggggagcaggggcggccagggcccgctggcccccgtggggaaaagggagaagctgcgtta
acagaggatgacattcggggctttgtgcgtcaggagatgagtcagcattgtgcctgccag
ggccagtttattgcatctggatcacgacccctccctagttatgctgcagacactgccagc
cctcagctccaccctgtgcctgtgctccgggtctctcatgcagaggaggaaggcgaggtg
cccccagaggacgatgaatatgaatattctgagtattctgtggaggaataccaggaccct
gaagttcttcaggatggcgatgacccctgcttgcttccactggatgagggctcctgcact
gcctacaccctgcgctggtaccatcgagctgtggcaggtggcacagatgcctgtcacccc
tttgtctatggcggctgtggagggaatgcgaatcgttttgggacccgtgaggcctgtgag
cgccgctgcatgccccgcatggtccagagccaggtaacaggtgctgcccgaagctga
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integrated database retrieval system
