Leopardus geoffroyi (Geoffroy's cat): 123605678
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Entry
123605678 CDS
T10761
Symbol
RAD54L2
Name
(RefSeq) helicase ARIP4
KO
K10876
RAD54-like protein 2 [EC:5.6.2.-]
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgf03400
]
123605678 (RAD54L2)
DNA repair and recombination proteins [BR:
lgf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
123605678 (RAD54L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
123605678
NCBI-ProteinID:
XP_045348926
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All DBs
Position
A2:20321117..20437682
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AA seq
1467 aa
AA seq
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MSDESASGSDPDLDPDVELEDAEEEEEEEEVAVEEHGRDDAEDLLDDPSLEDMCGTECAK
LEEDGQRPPRCTSTTSSQSEPSEQLRRHQGKSLASEDPKKKRAQKPSHMRRNIRKLLRED
QLEPVTKAAQQEELERRKRLEQQRKDYAAPIPTVPLEFLPEEIVLRASDGPQLPPRVLSQ
EVICLDSSSGSEDEKSSRDEVIELSSGEEDTLHIVDSSESVSEEDEEEEKGGTHVNDVLN
QRDALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKTSSGFG
CILAHSMGLGKTLQVISFIDVLFRHTPAKTVLAIVPVNTLQNWLAEFNMWLPAPEALPAD
NKPEEVQPRFFKVHILNDEHKTMAARAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATGR
SKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQALK
NIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQD
VRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMDRFRD
CGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKESLANEQDLDVEELGSAGTSARCPSQ
GTKGKGEDSTLASSMGEATNSKFLQGVGFNPFQERGNNIVTYEWAKDLLTNYQTGVLENS
PKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCLPGADGQGVQKWVRNV
SYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVFDASWNP
CHDAQAVCRVYRYGQKKPCHIYRLVADFTLEKKIYDRQISKQGMSDRVVDDLNPMLNFTR
KEVENLLHFVEKEPAPQASLNIKGIKEPVLQLACLKYPHLITKEPFEHESLLLNRKDHKL
TKAEKKAAKKSYEEDKRTSVPYTRPSYAQYYPASDQNLTSIPAFSQRNWQPTLKSDEKPV
ASVRPVQSTPIPMMPRHVPLGGSVSSASSTNPAMNFPINYLQRAGVLVQKVVTTTDIVIP
GLNSSTDVQARINAGESIHIIRGTKGTYIRTSDGRIFAVRATGKPKVPEDGRMAASGSQG
PSLESTSNGRHSASSPKAPDPEGLARPVSPDSPEIISELQQYADVAAARESQQSSPNSSA
ALPGPPAQLVDSSAVPGTALGTEPRHGGHCLNSSLLVTGQPCGDRNPVLDLRGHKRKMAM
PPAAQESARRRSRKGHLPAPVQPYEHGYPVSGGFAMPPVSLNHNLTAPFTSQAGENSLFM
GSTPSYYQLSNLLADARLVFPVTTDPLVPSGPVSSSSTATSVTASNPTFMLNPSVPGILP
SYSLPFSQPLLSEPRMFAPFPSPVLPSNLSRGMSVYPGYMSPHAGYPAGGLLRSQVPPFD
SHEVAEVGFSSNDDEDKDDDVIEVTGK
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgaatccgcctcagggagcgatccagacctggacccggacgtggagctggag
gatgcggaagaggaggaggaggaggaggaagtggcagtggaggagcacggcagggatgac
gcggaagacctactggatgacccatccctggaagacatgtgtggcactgagtgtgccaaa
ctggaggaagatgggcagcggccaccgcggtgcacttcaactacctcatctcagtctgag
ccttcagagcagcttaggcgccaccaaggcaagagcctcgcctccgaggaccccaaaaag
aagagagctcagaagccctcccacatgaggagaaacatacgaaagctgctccgggaggat
cagttggagcccgttaccaaagcagcacaacaggaagagttggaaagaaggaaacgcctg
gagcagcagaggaaggattatgcagcccccattcctactgttcccctggagttccttcct
gaggaaattgtcttaagagcaagtgatggtccccaactgcctcctcgggtcctgtcccag
gaagtcatttgtttggacagcagcagtggcagtgaggatgaaaaaagcagtcgagatgaa
gtgattgaactgagctctggagaggaagataccctgcatattgtggacagcagcgaatct
gtcagtgaggaagatgaggaagaggagaagggtggtacccacgtgaatgatgtcttaaac
cagcgtgatgctctggggcgggtccttgtcaatctgaaccaccctccggaggaggagaat
gtcttcctggccccacagttggcacgggcagtgaaacctcatcagattggtgggatccgg
ttcctgtatgataatctggttgaatccctggagaggtttaagaccagtagtggctttggc
tgtatcctggcccatagcatgggtctggggaaaactttgcaagtgatctccttcatcgac
gtcctcttccgccacacgccagccaaaactgtccttgccattgtgccggttaatactctt
cagaattggttggcagagttcaacatgtggcttccagcacctgaagcccttccagctgac
aacaagcctgaagaagtccagcctcggttctttaaagttcacatcttgaatgatgagcac
aagacaatggcagctcgtgctaaagtgatggctgattgggtatcagagggtggggtacta
ctgatggggtacgaaatgtacagactcctcaccctgaagaaatcctttgccacaggtaga
tcgaagaaaaccaagaaacgctctcacccggtcatcattgatctggatgaggaagatcga
cagcaggagtttcggagagagtttgagaaggccttatgccgccctggccctgatgtggtg
atttgtgacgagggacaccgcatcaaaaactgccaggccagcacctcacaggccctgaag
aatattcgctctcgccgccgagtggtgctgaccgggtaccccctgcagaacaacctcatt
gagtactggtgcatggtggactttgtgcgcccagacttcctcggcacccggcaggagttc
agcaacatgtttgaacgccccatcctgaatgggcagtgtattgacagcacgcctcaggat
gtccgcctcatgcggtaccggagccacgtcttgcacagcctcctggaaggctttgtgcag
aggagaggccacactgtgctgaagattcatctacctgccaaggaagaaaatgtgatcctg
gtgcggctctcaaagatccagcgagatttgtacacacagttcatggaccgtttccgagac
tgtggtagcagtggctggctggggctgaaccccctcaaggctttctgtgtgtgctgcaag
atctggaatcacccagatgtgctgtatgaagcccttcagaaggagagtctggccaatgag
caggacctagatgtggaagaacttggctcagctgggactagtgctcgctgcccatcacag
ggaacaaaaggcaagggggaggacagcaccttggcttcctcaatgggagaagcaaccaat
agcaaattcctacaaggggttggcttcaaccctttccaggagcgaggcaacaacattgtc
acatatgaatgggccaaggaccttttgactaattaccagactggggtcttagagaactct
cccaaaatggtattgcttttccacctgattgaggaaagtgtgaagcttggggacaagatt
ctcgtgttcagccagagcctttccactttggctctcatcgaggaattcctagggaaacga
gaagtgccctgtctacctggtgctgatgggcaaggagtacagaagtgggttcgaaacgtc
agctacttccggctagatggtagcacccctgcctttgagagggagcggctcattaatcag
ttcaatgatcccagcaacctcaccacctggctattccttctgtccacaagggctggatgc
ttgggtgtgaatctgatcggtgccaaccgagtggtggtgtttgatgcttcttggaaccct
tgccatgatgcccaggcagtgtgtcgggtataccgttatggccagaaaaagccctgtcac
atctatcgccttgtggctgatttcacccttgaaaagaagatctatgaccgacaaatttcc
aagcagggcatgtcagatcgggtggtggatgatctcaatccaatgctgaactttacccgg
aaggaggtggagaacctactgcactttgttgagaaggagccagctccccaagcatccttg
aacataaaggggatcaaggagccagtactccaacttgcctgtctgaagtaccctcacctc
atcaccaaggagccttttgagcatgagtcactgctccttaaccgaaaggatcacaagctg
accaaggctgagaaaaaagcagcaaagaaaagctatgaggaagacaagcgcacatccgtc
ccctatacccgcccgtcgtatgcgcagtattaccctgcaagcgaccagaacctgaccagc
atccctgctttcagtcagagaaactggcagccaacactgaagagtgatgagaagcctgtg
gccagtgttcgtcctgtgcagtccacccccatccccatgatgccccggcatgtcccactg
ggaggcagtgtaagctctgcctccagcacaaatccagccatgaacttcccgatcaactac
ctacagcgcgcgggggtccttgtgcagaaggtggtcaccacaacagatattgttattcct
ggactcaacagctccacagatgtacaggcgagaattaatgctggtgagagcattcacatc
atccgtgggacgaaagggacatacattcgtaccagtgatgggcggatctttgctgtccga
gcaactggcaaaccgaaggtcccagaagatggtcggatggctgcctcaggttcccagggg
ccttctctcgaatccacaagcaacggcagacacagtgcctcatcacccaaagcccccgac
cccgaggggctggccaggcccgtctctccagacagcccggagatcatcagtgagctccag
cagtatgcagatgtggctgccgccagggaatcccaacagagctccccaaactccagtgcc
gccctgcctggccccccggctcaactcgtggacagcagtgctgttcctgggacagctctc
gggactgagcctcgacatgggggtcattgcctcaatagttccctcttggtgaccggccag
ccctgtggtgacaggaacccagtgttggacttacggggccataagcgaaagatggccatg
ccacctgctgcccaagagtcagcccgccggcggtccaggaaaggccacctgccagccccc
gtgcagccgtacgaacacgggtatccagtttctggcgggtttgccatgccacccgtctcc
ttaaaccataacctcaccgctcccttcacctcccaggctggggagaactccttgtttatg
ggcagtaccccctcctactaccagctgtccaatttgctggcagatgcccgcctggtgttt
ccagtgactactgaccctctggtgccatcaggccccgtcagttcctcctccacggctacc
tcagtcactgccagcaaccccaccttcatgctcaacccgtctgttccagggatactaccc
agctattcactcccattctcacagccactcctgtccgagccgaggatgtttgcgcctttt
ccttcccctgtcttacccagcaacctttcacggggcatgtctgtctacccaggctacatg
tccccacatgcaggctaccctgctggcggcctcctccggtcccaggtgcctccatttgac
tctcatgaggttgctgaggtgggcttcagctccaatgatgatgaggataaggacgatgat
gtgatagaggtcactgggaaatag
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