Leopardus geoffroyi (Geoffroy's cat): 123605903
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Entry
123605903 CDS
T10761
Symbol
CNTN6
Name
(RefSeq) LOW QUALITY PROTEIN: contactin-6
KO
K06761
contactin 3/4/5/6
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lgf04515
]
123605903 (CNTN6)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lgf00537
]
123605903 (CNTN6)
Cell adhesion molecules [BR:
lgf04515
]
Immunoglobulin superfamily
Contactins
123605903 (CNTN6)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lgf00537
]
Others
123605903 (CNTN6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Sp38
Pur_ac_phosph_N
C2-set_3
V-set_CD47
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
123605903
NCBI-ProteinID:
XP_045349538
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All DBs
Position
A2:43426668..43710764
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AA seq
1062 aa
AA seq
DB search
MRLLWKLVILLPLINTCAGALTIQTSKLLGNILWRHKVIYTSQHYVYRCVCTGLLSRPVF
TQEPQDIIFPLDLSKSEIILNCAATGYPSPSYRWKQNGTDIDFTMSYHYRLDGGNLAISS
PRTDQDIGMYQCLATNTLGTILSQKAKLQFAYIEDFETKTRSTVSVREGQGVVLLCGPPP
HFGDLSYAWTFNDNPLYVQEDNRRFVSQETGNLYIAKVEPSDVGNYTCFVTNKEAQRSVQ
GPPTPLVQRTDGVMGEYEPKIEVRFPETIQAAKDSSVKLECFALGNPVPDISWRRLDGNP
LPGKVKYSKSQAILEIPNFQQEDEGFYECIAGNLRGRNLAKGQLIFYAPPEWEQKIQNTY
LSIYDSLFWECKASGKPNPWYTWLKNGERLTPEERIQIENGTLIITMLNVSDSGVYQCAA
ENKYQIIYANAELRVLASAPDFSKNPLKKTSVVQVGGDITIECKPTAFPRAAISWKRGME
SLRQSKRVFLSEDGSLKIYNVTRSDAGSYTCTATNQFGLAKNTGSLIVKERTVITIPPSK
MDVTVGESIVLPCQVSHDPSIEVIFIWSFNGDVIDLKKGVAHFERIGGESVGDLMIRNIQ
LNHSGKYLCTVKTTLESLSAVADIIVRGPPGPPEDVRVEHISSTTSQLSWRPGSDNNSPI
QIFTVQARTPFSVGWQAVSTVPEILNGKTYNATVVGLSPWVEYEFRVVAGNSIGIGEPSK
ASELLRTKASVPVVAPTNINGGGGSRSELVITWESIPEELQNGEEFGYIIMLRPVGSTTW
TKERVPSVESSRFVYRNESITPLSPFEVKVGVYNNEGEGSLSTVSIVYSGEDEPQLAPRG
TSVQSFSASEMEVSWNAIAWNRNTGRVLGYEVLYWTDDSKESMIGKIRVSGNVTTKNITG
LKANTIYFASVRAYNTAGAGPSSPPVNVTTKKSPPSQPPANIAWKLTNSKLCLNWEHVKT
MENESEVLGYKILYRQNRQSQTHILETNNTSAELLVPFEEDYLIEIRTVSDGGDGSSSEE
IRIPKMSSLSSRGVPVLEPSVCFLSIVIXFFTVLQFSHLYDE
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgctatggaaactggtaattctgctgccactcataaatacttgtgcaggtgct
ctgacaatacaaacatctaaacttctgggcaatatcttgtggagacacaaagttatatat
acttctcagcattatgtgtataggtgtgtctgtactggtcttttgagccgtcctgttttt
acccaggagccacaagacattatttttcctttggatttatcaaaatctgaaatcatcctg
aattgtgctgccactggttacccttcacccagttataggtggaagcaaaatggcacagat
attgattttaccatgagttatcactacaggttggatggaggcaatttggcaatcagtagt
ccccgcacagatcaagatattggcatgtaccagtgcctggccaccaacactctggggaca
atactgagtcagaaggcgaagctccagtttgcatatattgaagactttgaaaccaaaaca
agaagcacagtgtccgtccgagaaggtcaaggtgtggtgcttctctgtggcccaccacca
cactttggagatttatcttatgcatggactttcaatgataaccccttatatgtccaagag
gacaacagacggtttgtatcacaagagacaggaaacctatacattgccaaagtggaacca
tcagatgtgggcaactatacttgcttcgtaacaaacaaggaagcccagagaagtgttcaa
ggaccacccaccccattagtgcagcgcactgatggtgtgatgggggaatatgaaccaaag
attgaagtgcgttttcctgaaactatacaagctgcaaaggattcatctgtaaaactggaa
tgctttgcccttggaaatccagtccccgatattagttggaggaggttggatggaaacccg
ttgccagggaaagtcaagtacagcaaatcccaagctattcttgaaatcccgaactttcaa
caggaagatgaaggcttctatgagtgcattgcaggcaaccttcgaggaagaaaccttgca
aagggtcaactcattttctatgccccaccagaatgggaacaaaaaatccaaaacacttac
ctgtctatctatgacagtttgttttgggaatgcaaagctagtggaaagccaaatccttgg
tacacttggttaaagaatggtgaacgcctcactccagaggaaagaattcaaatagaaaac
gggacacttatcataactatgctgaatgtgtcagattctggtgtctaccagtgtgctgca
gaaaacaaatatcagataatttatgcaaatgcagaattgagagtattagcctcagctcct
gatttctctaaaaatcctcttaaaaaaacttcagttgtgcaagttggtggagatatcact
atcgaatgcaaaccaactgcttttcctagggcagctatctcctggaaaagaggaatggag
agcctgagacagagcaaaagagtgtttctctcagaggacggcagcctcaagatatataat
gttaccaggtcagatgccggatcatacacttgcacagctacaaatcagtttggcctcgca
aagaacactggcagcctaatcgtaaaagagaggactgttattaccattccaccttccaaa
atggatgttacagttggagagagtatagtcctaccatgccaggtgtcccatgacccctcc
attgaagttatatttatatggtctttcaatggagatgtcatagacttaaaaaaaggagtg
gctcattttgaaaggattggaggagaatctgttggggatttgatgataaggaatattcag
ttaaatcattcaggaaaatatctatgcacagtgaaaacaactctggaaagtttatctgct
gtggctgatatcattgttagaggtccaccaggtccccctgaggatgtaagagtggaacac
atttccagtactacttctcaactaagctggagaccaggctcagataataatagtcccatt
caaatatttactgttcaggctcggacaccattttctgtgggttggcaggctgtttcgact
gttccagaaattctcaatggtaagacgtacaatgcaacagtggttggtttgagtccttgg
gtggaatatgaatttcgtgtcgttgctgggaacagcattgggattggagaaccaagtaaa
gcatcagaattgttaagaaccaaagcgtcagtgcctgttgtggcgccaacaaacatcaac
ggaggtggaggaagtcgttcggaactcgtcattacgtgggagtcaattccagaagaacta
cagaatggagaggaatttggatacatcatcatgttgcggccagttggctcaacaacctgg
accaaggaaagagtaccatctgtagaatcatcaagatttgtttacagaaatgaaagtatc
acccccctctctccctttgaagtcaaagtgggtgtatataataatgaaggagaaggatct
ctgagtaccgtgtccattgtctactccggggaagatgaacctcagctggctccaagagga
acttctgtccagagtttttctgcttcggaaatggaggtttcatggaatgctattgcctgg
aatagaaacactggaagagtgctgggctatgaggtattatattggacagatgactccaaa
gaatccatgattgggaaaattagagtcagtgggaatgtcacaaccaaaaacatcacaggg
ctgaaagctaataccatctactttgcttctgtgagagcttacaacactgcaggggcaggg
ccctcaagccccccagtcaacgttaccaccaaaaagtctccaccaagccaaccaccagct
aacattgcctggaagctgacaaactctaaattatgcctgaactgggaacatgtaaaaacc
atggaaaatgagtctgaagtgttgggctacaagattctgtatcggcaaaacagacagagt
caaacacatatcttggaaacaaacaatacatcggctgagcttctggttccatttgaagaa
gactacttgattgaaataagaacagttagtgatggtggggatggaagcagcagtgaagaa
attaggattccaaaaatgtcaagcttgagttccagaggagttccagtcttagaacctagc
gtctgtttcctgtcaattgtcatcnnattttttactgttttgcaattcagccacttatac
gatgaataa
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