Leopardus geoffroyi (Geoffroy's cat): 123605918
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Entry
123605918 CDS
T10761
Symbol
BHLHE40
Name
(RefSeq) class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
123605918 (BHLHE40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lgf03000
]
123605918 (BHLHE40)
Transcription factors [BR:
lgf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
123605918 (BHLHE40)
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GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
Oscp1
Motif
Other DBs
NCBI-GeneID:
123605918
NCBI-ProteinID:
XP_045349571
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Position
A2:46951086..46957452
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AA seq
412 aa
AA seq
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MERIPSAQPPPACLPKAPGLEPGDLPGMDFAHMYQVFKSKRGIKRSEDSKETYKLPHRLI
EKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTNLIDQQQQKIIA
LQSGLQAGELSGRNVEAGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLVTHLHRVVS
ELLQGGTSRKPSDPAPKAMDFKEKPSSLAKGSEGPGKNCVPVIQRTFAHSSGEQSGSDTD
TDSGYGGESEKSDLRGEQPYFKSDHGRRFTMGERIGVIKQESEEPPTKKSRMQLSDDEGH
FTGSDLISSPFLGPHPHQPPFCLPFYLIPPSATAYLPMLEKCWYPTSVPVLYPGLNASAA
ALTSFMNPDKISAPLLMPQRLPSPLPAHPAIDSSALLQALKQIPPLNLETKD
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggagcggatccccagcgcgcaaccgccccctgcctgcctgcccaaagctccaggactg
gagcccggagacctacctgggatggattttgcccacatgtaccaagtgttcaagtcgaag
aggggaataaagcggagcgaggacagcaaggagacctacaaactgccgcaccggctcatc
gagaaaaagagacgtgaccggattaacgagtgcatcgcccagctgaaggatctcctaccc
gaacatctcaaacttacaactttgggtcacttggaaaaagcagtggttcttgaacttacg
ttgaagcatgtgaaagcactaacaaacctaattgatcagcagcagcagaaaatcattgcc
ctgcagagcggtttacaagctggtgagctgtcggggagaaatgtggaagcaggtcaagag
atgttctgctcaggtttccagacgtgtgcccgggaggtgcttcagtacctggccaagcat
gagaacactcgggacctgaagtcttcacagcttgtcacccaccttcaccgtgtggtctca
gagctgctacagggtggtacctccaggaagccgtcggacccagctcccaaagccatggac
ttcaaggagaaacccagctccctagccaaaggctccgaaggccctgggaaaaactgtgtg
ccggtcatccagcggacttttgctcactcgagtggggagcagagtggcagtgacacggac
acagacagtggctacggaggagagtccgagaagagtgacttacgcggtgagcagccgtac
ttcaaaagtgatcacggacgtaggttcaccatgggagaaaggatcggtgttattaagcaa
gaatctgaagaaccaccaacgaaaaagagcagaatgcagctgtcagatgatgaaggccat
ttcactggcagtgacctgatcagctccccgttcctgggcccgcacccacaccaacctccc
ttctgtctgcccttctatctgatcccgccgtccgcaaccgcctacttacccatgctggag
aagtgctggtatcccacctccgtcccagtgttgtacccaggcctcaacgcctctgctgca
gccctcaccagcttcatgaacccagacaagatctcagcccccttgctcatgccccagaga
ctcccttctcccttgccagcccatccagccatcgactcttctgccctgctccaggctttg
aagcagatcccccctttaaacttagaaaccaaagactaa
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