Leopardus geoffroyi (Geoffroy's cat): 123606003
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Entry
123606003 CDS
T10761
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
123606003 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lgf03036
]
123606003 (MBD4)
03400 DNA repair and recombination proteins [BR:
lgf03400
]
123606003 (MBD4)
Chromosome and associated proteins [BR:
lgf03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
123606003 (MBD4)
DNA repair and recombination proteins [BR:
lgf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
123606003 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
123606003
NCBI-ProteinID:
XP_045349836
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All DBs
Position
A2:complement(54205197..54215155)
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AA seq
574 aa
AA seq
DB search
MESPSLRDYGAARSVTSSERLDPDRPSDLRKKDVTLELERVGKDEKQMMIKNSSEWNPLL
QESIASSQIGGSTMTECHKSVPCGWERVVKQRLSGKTAGRYDVYFISPQGLKFRSKSSLA
KYLHKNGETSLTPEDFDFTVPSKRGIKARHKDNNIAPLTSQMQNERSNSNWNLRTRSWWR
KGVFPLPSGTSESQNSRGPSNFKEDEGVNDVDSRKVRKSKRKVTILKGIQIKKTKTGCQK
GLPESTQSNRKRESEYNKADAESEPVEQRSQLDKTFSISDAGASNKTRSVTNEEKRIVKE
KSLSSGSNFCFEQITSGTINKLCSTEEAEHSKKCEETFLESEEIRTKLEAGERKEHLHTD
ILKCGSEMDDNCSQTEKDSISVKICQGIQSAEAAEDTIPRTQIEKRKTSLYFSSKYNKEA
LSPPRRKAFKKWTPPRSPFNLVQETLFHDPWKLLIATIFLNRTSGKMAIPVLWEFLEKYP
SAEVARTADWRDVSELLKPLGLYDLRAKTIIKFSDEYLTKQWRYPIELHGIGKYGNDSYR
IFCVNEWKQVHPEDHKLNKYHDWLWENHEKLSLS
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggagagtccgagcctgcgggactacggagctgcccgctcggtcacttccagtgagcgc
ctagacccagaccggcccagtgacctccgtaagaaagatgttactctggaattggaaaga
gtgggaaaagatgaaaagcaaatgatgataaagaacagcagtgagtggaatcccctgctg
caagaatccattgcttccagtcagattggtggtagtacaatgacagaatgccataagtct
gtcccatgcggatgggaaagagttgtgaagcaaaggttatcagggaaaacagcaggaaga
tatgatgtatattttatcagcccacaaggactgaagttcagatccaaaagttcacttgct
aaatatcttcacaaaaatggagagacttctcttacaccagaagattttgattttactgta
ccttctaaaaggggcatcaaggccagacataaagataacaacatagcgcctctgacatcc
caaatgcaaaatgaaaggagcaattcaaactggaacctcaggacacgaagctggtggaga
aaaggtgtctttcccctgccaagtggtacttcggaatcgcaaaatagcagaggaccatct
aactttaaagaagatgagggtgttaatgatgttgactccagaaaggttagaaagtccaaa
cgaaaggtgactattttaaaaggaattcaaattaagaaaactaaaacagggtgccagaag
ggtcttcccgagtctactcaaagtaataggaaaagagaatctgaatataataaggcagat
gctgaaagtgaacctgttgagcaaagaagtcagcttgataaaactttctccatttctgat
gctggagcaagcaacaagacccgcagtgtaaccaatgaagaaaagagaattgtaaaagaa
aaatcactgagttcaggatcaaacttttgttttgaacaaataacttctggcaccataaac
aaattatgttcaaccgaagaagcagaacacagcaagaagtgtgaggaaacctttttagaa
tctgaggaaataagaacaaaactagaagctggggaaaggaaggaacatttgcatactgac
attttaaaatgtggctctgaaatggatgacaactgctcacaaacggagaaagactctatt
tctgtgaaaatatgtcaaggtattcagagcgctgaagcagctgaagataccattccacgg
acacaaatagaaaaaaggaaaacaagcctatatttttccagcaaatataacaaagaagcc
cttagccccccacgacgcaaagcctttaagaagtggacacctcctcggtcaccttttaac
ctcgtccaagaaacacttttccatgatccatggaagctcctcatcgctactatatttctc
aatcggacctcaggtaaaatggcaatccccgtgctctgggagtttctagagaagtaccct
tcagctgaggtagcaagaaccgcagactggagagatgtgtcagaacttcttaaacctctt
ggtctctatgatcttcgagcaaaaaccattatcaagttctcagatgaatatctgacaaag
cagtggaggtacccgattgagcttcacgggattggcaaatatggcaatgactcttaccga
attttttgcgtcaatgagtggaagcaggtgcaccctgaagaccataagttaaataaatat
catgactggctttgggaaaatcatgaaaaattaagtctgtcctaa
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