Leopardus geoffroyi (Geoffroy's cat): 123606284
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Entry
123606284 CDS
T10761
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04151
PI3K-Akt signaling pathway
lgf04510
Focal adhesion
lgf04512
ECM-receptor interaction
lgf05145
Toxoplasmosis
lgf05146
Amoebiasis
lgf05165
Human papillomavirus infection
lgf05200
Pathways in cancer
lgf05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
123606284 (LAMB1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123606284 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
123606284 (LAMB1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
123606284 (LAMB1)
09162 Cancer: specific types
05222 Small cell lung cancer
123606284 (LAMB1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
123606284 (LAMB1)
09174 Infectious disease: parasitic
05146 Amoebiasis
123606284 (LAMB1)
05145 Toxoplasmosis
123606284 (LAMB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
CorA
ATG17_like
F5_F8_type_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
123606284
NCBI-ProteinID:
XP_045350391
LinkDB
All DBs
Position
A2:77210896..77285390
Genome browser
AA seq
1786 aa
AA seq
DB search
MGLLQVFAFSFLALCGAQVRAQEPEFSYGCAEGSCYPATGDLLIGRAQKLSVTSTCGLHK
PEPYCIVSHLQEDKKCFICNSQDPYHETLNPDSHLIENVVTTFAPNRLKIWWQSENGMEN
VTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKTWGVYRYFAYDCEGSFPGISTG
PMKKVDDIICDSRYSDIEPSTEGEVIFRALDPAFRIEDPYSPRIQNLLKITNLRIKFVKL
HTLGDNLLDSRMEIREKYYYAVYDMVVRGNCFCYGHASECAPVDGINEEVEGMVHGHCMC
RHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVYLATGNVSGG
VCDDCQHNTMGRNCEQCKPFYFQHPERDVRDPHLCERCTCDPAGSQNGGICDSYTDFSAG
LIAGQCRCKLHVEGEHCELCKEGFYGLSAEDPFGCKSCACNPLGTIPGGNPCDSETGYCY
CKRLVTGQHCDQCLPEHWGLSNDLDGCRPCDCDLGGALNNSCSPESGQCACRPHVIGRQC
NEVESGYYFTTLDHYIYEAEEANFGPGVSIVERQYVQDRIPSWTGAGFVRVPEGAYLEFF
IDNIPYSMEYDILIRYEPQLPDRWEKAVIMVQRPGKIPTSSRCGNTIPDDDNQVVSLSPG
SRYVVLPRPVCFEKGVNYTVRLELPQYTSSDSDLESPYTLIDSLVLMPFCKSLDIFTVGG
SGDGLVTNSAWETFQRYRCLENSRSVVKTPMTDVCRNIIFSISALLHQTGLACECDPQGS
LSSVCDPNGGQCQCRPNVVGRTCDRCAPGTFGFGPSGCKPCECHLQGSVNAFCDPITGQC
HCFQGVYARQCDRCLPGYWGFPSCQPCQCNGHADDCDSATGACSGCQDYTTGHNCERCLA
GYYGDPIIGSGDHCRPCPCPDGPDSGRQFANSCYQDPVTLQLACVCNPGYVGSRCDDCAS
GFFGNPSDVGGSCQPCECHGNIDTTDPEACDRETGRCLKCLYHTEGDQCQLCRLGYYGDA
LRQDCRKCVCNYLGTVQDHCNGSDCQCDKTTGQCSCLPNVVGQNCDRCAPNTWQLASGTG
CDPCSCDPAHSFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPNVECRACDCDPRGIE
TPQCDQSTGRCVCVEGVEGPRCDKCTRGYSGVFPDCTPCHQCFAVWDVIVAELTNRTQKF
LEKAKALKISGVIGPYRETVDSVEKKVNEIRDILAQSPATEPLKNIGDLFEEAEKLTKDV
TDKMAQVEVKLSDTASQSNSTARELDSLQTEAESLDNTVKELAEQLEFIKNSDIRGALDS
ITKYFQMSLEAEERVNASTTDSNSTVDQSTLTRDRVEELLLERESQFREKQEEQARLLDE
LAGKLQSLDLSAVAEMTCGTPPGASCSETECGGPNCRTDEGEKKCGGPGCGGLVTVAHSA
WQKAMDFDRDVLSALAEVEQLSKMVSEAKLRADEAKQNAQDVLQKTNATKEKVDKSNEDL
RNLIKQIRNFLTQDSADLDSIEAVANEVLKMEMPSTPEQLQNLTEDIRERVESLSQVEVI
LQQSAADIARAEMLLEEAKRASKSATDVKVTADMVKEALEEAEKAQIAAEKAIKQADEDI
QGTQNLLTSIESETAASEENLLNASQRISELERNVEELKRKAAQNSGEAEYIEKVVYTVK
QSADDVKKALDGEVDEKYKKVEKLIAQKTEESADARRKAEMLQNEAKTLLAQANSKLQLL
KDLERKYEDNQKYLEDKAQELVRLEGEVRSLLKDISQKVAVYSTCL
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atggggctgctccaggtgttcgctttcagtttcttagccctgtgcggagcccaagtgcgc
gctcaagaacccgaattcagctacggctgcgcggagggcagctgctaccccgccactggc
gaccttctcatcggccgagcacaaaagctctcggtgacctcgacgtgcgggctgcacaag
cctgagccctactgtattgtcagccacctccaggaggacaaaaaatgcttcatatgcaat
tcacaagatccttatcatgagaccctcaatcctgacagtcatctcattgaaaatgtggtc
actacatttgctccaaaccgccttaagatttggtggcaatccgaaaatggcatggaaaac
gtaactatccaactggatctggaagcagaattccattttactcatctcataatgactttc
aagacattccgtccggccgcgatgctgatagaacgatcgtctgacttcgggaaaacctgg
ggtgtgtacagatactttgcctatgactgtgagggctcatttccaggcatttcaactggc
cccatgaaaaaagtggatgatataatctgtgattcccgctattctgacattgaaccctcg
acggaaggagaggtgatatttcgtgctttagatcccgcgttcagaatagaggatccttat
agtccgaggatacagaatctcttaaaaatcaccaacttgagaatcaagtttgtgaagctc
cacactttgggagataaccttttggattcccggatggaaatcagggaaaagtattactat
gcagtttatgatatggtggttcgaggaaattgcttctgctacggtcatgccagcgaatgc
gcccctgtggatggaatcaatgaagaagtggaaggaatggttcacgggcactgcatgtgc
aggcataataccaagggcttaaactgtgaactgtgcatggatttttaccacgatttacct
tggaggcccgctgaaggtcgaaacagcaatgcctgtaaaaagtgtaactgcaatgaacat
tcgagctcgtgccactttgacatggccgtgtacttggccaccggcaatgtcagcggaggg
gtgtgtgatgactgtcagcacaacaccatgggacgcaactgtgaacagtgcaagccgttt
tacttccagcacccggagagagacgtccgagaccctcacctctgtgaacgatgtacctgt
gacccagctggatctcagaatgggggaatctgtgacagttacaccgatttttctgctggc
ctcattgccggccagtgtcggtgtaaattacacgtggaaggagaacattgtgaactttgc
aaagagggcttctacggcttaagtgctgaagatccatttggttgtaaatcttgtgcctgc
aatcctctgggaacgattcctggcgggaatccttgtgattctgagactggttactgctac
tgtaagcgtctggtgacaggacagcattgtgaccagtgtctgccggagcactggggtttg
agcaatgatttggacggatgtcgaccttgtgactgtgaccttggaggggctttaaacaac
agctgttcccctgaatcgggccagtgcgcgtgccgaccgcacgtgatcgggcgtcagtgc
aacgaagtggagtctggttactacttcaccaccttggatcactacatctacgaagcagaa
gaagccaactttgggcccggggtcagcatcgtggagcggcagtacgttcaagaccggatt
ccttcctggacgggagccggcttcgtccgagtgcctgaaggggcttatttggagtttttc
attgacaacataccatattccatggagtatgacatcttaattcgctatgagccacagctc
cccgaccgctgggaaaaagctgtcatcatggtgcagcgacctggaaagatcccaaccagc
agccgatgcggtaataccattcccgatgatgacaaccaggtggtgtccttatcgcctggc
tcaaggtatgttgtccttccgcgccccgtgtgctttgagaagggtgtgaattacacggtg
aggttagagctgcctcagtacacgtcctccgacagcgacctggagagtccctacacgctt
atcgactcccttgttctcatgccgttttgtaaatcactggatatcttcaccgtgggagga
tcaggggacgggttggtcaccaacagcgcctgggaaacctttcagagatacagatgtctg
gagaacagcagaagcgttgtgaaaacaccaatgaccgacgtgtgcagaaacataatcttc
agcatttctgccctgttgcaccagacaggcctggcttgtgaatgtgaccctcagggctcc
ttaagttccgtctgcgatcccaatggaggccagtgccagtgccggcccaatgtggttgga
agaacctgcgacagatgtgccccgggcaccttcggctttggccccagtggctgcaaacct
tgtgagtgccacctgcaagggtccgtcaacgccttctgcgaccccatcactggccagtgc
cactgcttccagggggtatatgctcggcagtgtgaccggtgcttgcccggctactggggc
ttccccagctgccagccctgccagtgtaacggccacgccgacgactgtgactctgccacc
ggggcgtgctcgggctgccaggactataccacggggcacaactgtgaaaggtgcttggcc
ggttactatggcgatcccatcattgggtcaggagatcactgccgcccttgtccttgccca
gatggtcccgacagtggacgccagttcgccaatagctgctatcaagaccctgttactttg
cagcttgcctgtgtctgtaatcccggatacgttggctccagatgtgacgactgtgcctca
ggcttctttggcaatccctcggacgtggggggctcctgtcagccttgcgagtgtcacggc
aacattgacacgacagacccggaagcctgtgacagggagaccggaaggtgccttaagtgc
ctgtaccacacggaaggggaccagtgccagctctgccgactcgggtactatggggacgcg
cttcgccaggactgtcgaaaatgtgtctgcaattacctgggcaccgtgcaggaccactgc
aacggctctgactgccagtgtgacaaaaccaccggtcagtgctcgtgtcttcctaatgtg
gtcgggcagaactgtgaccgctgtgcgcccaacacctggcagctggccagcgggaccggg
tgtgacccgtgcagctgtgatcctgctcattcctttgggccatcttgcaatgagttcacg
gggcagtgccagtgcatgcctgggttcggaggccgcacctgcagcgagtgccaggagctc
ttctggggagaccccaacgtggagtgccgagcctgtgactgtgaccccaggggcatcgag
acaccacagtgtgaccagtccaccggccggtgcgtctgcgtggagggtgtcgagggcccg
cgctgtgacaaatgcacacgcgggtactcgggggtcttccccgactgcactccctgccac
cagtgctttgccgtgtgggatgtgatcgtcgccgagttgaccaatcggacccagaagttc
ctggagaaagccaaggccctgaaaatcagcggcgtgattgggccttaccgggagactgtg
gactcggtggagaagaaagtcaatgagatcagagacatcctggcccagagcccagccacg
gagccgctgaagaacatcggggatctctttgaggaagcagagaaattaaccaaagatgtt
acagacaagatggctcaagtagaagtgaaattgtctgacacagcttcccaaagcaacagc
acggccagagaactagattctctacagacagaagcagaaagcctagacaacacagtgaaa
gagcttgctgagcagttggaatttatcaaaaactcagatattcggggcgccttggatagc
atcaccaagtatttccagatgtctctagaggcagaggagagggtgaacgcctccaccaca
gattccaacagcactgtggaccagtcgactctcactcgggacagagtagaagagttgttg
ttggaacgagaatcccagttcagggaaaaacaagaggaacaggcccgccttctggatgaa
ctggcaggcaaactacagagtctagacctttcagccgttgccgagatgacctgtgggacg
cctccgggggcctcttgttccgagaccgagtgtggcggcccgaactgcaggactgacgaa
ggagagaagaagtgtgggggacccggctgcggcggcctggtcacggtcgcccacagtgcc
tggcagaaagccatggactttgaccgcgatgtcctgagcgccctggccgaggtggagcag
ctctccaagatggtctctgaagcgaaactgagggcagacgaggcaaaacaaaatgctcag
gatgttctgcagaaaaccaatgccaccaaagaaaaagtggacaagagcaatgaggacctg
agaaatctgatcaagcaaatccgaaactttttgacccaggatagtgctgatttggacagc
attgaagcagttgctaacgaagtgctgaaaatggaaatgcccagcaccccagagcagtta
cagaacttgacagaagacattcgggagcgagttgaaagcctttctcaagtagaggttatt
ctacagcaaagcgctgctgacattgccagagcggagatgttgctagaagaagctaaaaga
gccagcaaaagtgcaactgatgttaaagtcactgcagacatggtcaaggaggctctggag
gaagcagaaaaggcccagattgcagcagagaaagcaattaaacaagcagatgaagacatc
cagggaacccagaacctgctgacttcgattgagtcggaaacagcggcttcggaggagaac
ttgctcaacgcctcccagcgcatcagcgagcttgagaggaatgtggaagaactgaaacgg
aaggctgcccagaactctggggaggcagaatatattgagaaagtagtatacaccgtgaaa
caaagtgcagatgatgtgaagaaggctctggatggtgaagttgatgaaaagtataagaaa
gtagaaaaattaattgcccaaaaaactgaagagtcagctgatgccagaagaaaagctgaa
atgctacaaaatgaagcaaaaacacttttggctcaagcaaacagcaagctgcagctcctg
aaagatttagaaagaaaatatgaggacaatcaaaaatatttagaagataaagctcaagaa
ttagtaagactggaaggagaagtccgttcgctcctcaaggatataagccagaaagttgct
gtttacagcacctgcttgtaa
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integrated database retrieval system