Leopardus geoffroyi (Geoffroy's cat): 123606399
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Entry
123606399 CDS
T10761
Symbol
ABCB1
Name
(RefSeq) ATP-dependent translocase ABCB1 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf02010
ABC transporters
lgf04976
Bile secretion
lgf05206
MicroRNAs in cancer
lgf05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
123606399 (ABCB1)
09150 Organismal Systems
09154 Digestive system
04976 Bile secretion
123606399 (ABCB1)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
123606399 (ABCB1)
09162 Cancer: specific types
05226 Gastric cancer
123606399 (ABCB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lgf02000
]
123606399 (ABCB1)
04147 Exosome [BR:
lgf04147
]
123606399 (ABCB1)
04090 CD molecules [BR:
lgf04090
]
123606399 (ABCB1)
Enzymes [BR:
lgf01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
123606399 (ABCB1)
Transporters [BR:
lgf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
123606399 (ABCB1)
Exosome [BR:
lgf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
123606399 (ABCB1)
CD molecules [BR:
lgf04090
]
Proteins
123606399 (ABCB1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
Rad17
RsgA_GTPase
Zeta_toxin
AAA
AAA_5
G-alpha
AAA_29
AAA_7
SbcC_Walker_B
AAA_15
DUF815
PRK
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
123606399
NCBI-ProteinID:
XP_045350632
LinkDB
All DBs
Position
A2:complement(91712851..91954986)
Genome browser
AA seq
1310 aa
AA seq
DB search
MEEQRRSSGKWAKKEILKPCFTGNRVGPNLKTYVCVFCVFSCPSNITLKPNMGKKEKKEK
KPTVSTLAMFRYSNWLDRLYMLVGTMAAIIHGAALPLMMLVFGDMTDSFANAGISRNLTN
LNITGESIVNDSYFINRLEEEMTTYAYYYSGIGAGVLVAAYIQVSFWCLAAGRQILKIRK
QFFHAIMRQEVGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQSMATFFIGFIVGFT
RGWKLTLVILAISPVLGLSAAIWAKILSSFTDKELLAYAKAGAVAEEVLAAIRTVIAFGG
QKKELERYNKNLEEAKRIGIKKAITANISIGIAFLLIYASYALAFWYGTSLVLSHEYSIG
QVLTVFFSVLIGAFSVGQASPSIEAFANARGAAYEIFKIIDNKPSIDSYSKNGHKPDNIK
GNLEFKNVHFSYPSRKEVKILKGLNLKVQSGQTVALVGNSGCGKSTTVQLMQRLYDPTDG
MVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENICYGRENVTMEEIEKAVKEANA
YDFIMKLPNKFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDSESEAVV
QVALDKARKGRTTIVVAHRLSTIRNADVIAGFDDGVIVEKGNHDELMKEEGIYFKLVTMQ
TRGNEIELENAVYESISEIDALEMSPKDSGSSLIRRRSTRKSIHASQGQDRKLGTKENLD
EHVPPVSFWRILKLNITEWPYFVVGIFCAIINGGLQPAFSVIFSRIIGVFTRVEDPETKR
QNSNIFSLLFLVLGIVSFITFFLQGFTFGKAGEILTKRLRYMVFRSMLRQDVSWFDDPKN
TTGALTTRLANDAAQVKGAIGSRLAIITQNIANLGTGIIISLIYGWQLTLLLLAIVPIIA
IAGVVEMKMLSGQALKDKKELEGAGKIATEAIENFRTVVSLTREQKFEYMYAQSLQVPYR
NSLRKAHIFGISFSITQAMMYFSYAGCFRFGAYLVAHEFMDFQDVLLVFSAIVFGAMAVG
QVSSFAPDYAKAKVSAAHVIMIIEKIPLIDSYSTEGLMPNTLEGNVTFNEVMFNYPTRPD
IPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGTVLIDGKEIKHLNVQWL
RAHMGIVSQEPILFDCSIGENIAYGDNSRVVSQEEIVRAAKEANIHPFIETLPDKYNTRV
GDKGTQLSGGQKQRIAIARALVRQPRILLLDEATSALDTESEKVVQEALDKAREGRTCIV
IAHRLSTIQNADLIVVFQNGKVKEHGTHQQLLAQKGIYFSMVSVQTGAKR
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atggaagagcagagaagaagttctggaaaatgggcgaaaaaagagatactgaaaccatgc
tttactgggaatagggtgggaccaaatctgaagacttatgtttgtgtattttgtgtgttt
tcatgtccgtctaacatcactttaaagccaaatatgggtaaaaaagagaagaaagaaaag
aaaccaactgtcagtacacttgcaatgtttcgctattcaaattggcttgataggttatat
atgttggtggggacaatggccgccatcatccatggagctgcactccctctcatgatgctg
gtttttggagacatgacggatagctttgcaaatgcaggaatttcacgaaacctaactaat
ctaaacataactggtgaaagtattgtcaacgattcatatttcatcaaccgtctggaggag
gaaatgaccacgtatgcctattattacagtgggatcggtgctggtgtgctggttgctgct
tacatccaggtttcattctggtgcctggcagctggaaggcaaatactcaaaatcagaaaa
caattttttcatgctataatgcgacaggaggtaggctggtttgatgtgcatgatgttgga
gagcttaacacccggctcacggatgatgtctccaaaattaatgaaggaattggtgacaaa
attggaatgttctttcagtcaatggcaacatttttcatcggttttatagtgggatttaca
cgtggttggaagctaacccttgtgattttggccatcagccctgttcttggactgtcagct
gctatctgggcaaagatactatcttcatttactgataaagaactcttggcatatgcaaaa
gctggagcagtagctgaagaggtcttagcagcaattagaactgtgattgcctttggagga
caaaagaaagaacttgaaaggtacaacaaaaacttagaagaagctaaaagaattgggata
aagaaagctatcacagccaacatttctatcggtatcgctttcctgttgatctatgcatca
tacgccctggcattctggtacgggacctccttggtcctctcccatgaatattctattgga
caagtactcactgttttcttttctgtattaattggggcttttagtgttggacaggcatcc
ccaagcattgaagcatttgcaaatgcaagaggagcggcttatgaaatcttcaagataatt
gataataaaccaagtattgacagctattcgaagaatggacacaaaccagataatattaag
ggaaatctggagttcaaaaacgttcacttcagttacccatctcgaaaagaagttaagatc
ttgaagggcctcaacctgaaggttcagagtgggcagacagtggccctggttgggaacagt
ggctgtgggaaaagcacgacagtgcagctgatgcagagactctatgaccccacagatggc
atggtcagtattgatggacaggacattaggaccataaatgtgagatatcttcgggaaatc
attggtgtggtgagtcaggaacctgtgttgtttgccactacaatagctgaaaacatttgc
tatggacgtgaaaatgtcaccatggaggagattgagaaagctgtcaaggaagccaatgcc
tatgactttatcatgaaactccctaataaatttgataccctggttggagagagaggggcc
cagctgagtggtggacagaaacagagaatcgccatcgctcgggccctggttcgcaacccc
aagatcctcctgctggatgaggccacatcagccttggacagtgaaagtgaagcagtggtt
caggtggctctggataaggccagaaaaggccggaccaccatagtggtagctcatcgtttg
tctacaattcgtaatgctgatgtcatcgccggttttgatgatggagtcattgtggaaaaa
ggaaatcatgatgaactcatgaaagaggaaggcatttacttcaaacttgtcacaatgcag
acaagaggaaatgaaattgaattagaaaatgcagtttatgaatccataagtgaaattgat
gccttggaaatgtctccaaaagattcaggatccagtttaattagaagaagatcaacccgc
aagagtatacatgcatcacaaggccaagatagaaagcttggtacaaaagagaacttggat
gaacatgtacctccagtttccttctggaggattctgaagctcaatataactgaatggcct
tattttgtggttggtatattctgtgctattataaatggaggcctgcaaccagcattttca
gtaatattttcaaggattataggggtttttaccagagttgaggatcctgaaacaaaacga
cagaatagtaacatattttcattattgtttctagtccttggaattgtttctttcattaca
tttttccttcagggcttcacgtttggcaaggctggggagatcctcaccaagcggctccga
tacatggtcttcagatccatgctaagacaggatgtgagctggtttgatgaccctaaaaat
actactggagcattaacaaccaggcttgccaatgacgctgctcaagttaaaggggctata
ggttccaggcttgctatcattacccagaatatagcaaatcttgggacaggcattattata
tccttaatctatggctggcaattgacactcttactcttagcaattgtacccatcattgca
atagcaggagttgttgaaatgaaaatgttgtctggacaagcactgaaagataagaaagaa
ctagaaggtgctgggaagattgctactgaagcaatcgaaaacttccgaactgttgtctct
ttgactcgagagcagaagtttgaatatatgtatgcacagagtttgcaggtaccatacaga
aactctttgaggaaagcacacatctttggaatctcattttccatcacccaggcaatgatg
tacttttcctatgctggttgtttccggtttggtgcctacttggtggcacatgagttcatg
gactttcaagatgttctcttggtattctcagctattgtcttcggtgccatggcagtgggg
caggtcagttcatttgctcctgactatgccaaagccaaagtatcagctgcccacgtcatc
atgatcattgaaaaaatccctctgatcgacagctatagcacagaaggcctaatgcccaac
acgttggaaggaaatgtgacatttaatgaagtcatgttcaactatcccactcgaccagat
atcccagtgcttcaagggctgagcctggaggtgaaaaagggccagacgctggccctggtg
ggcagcagtggctgcgggaagagcacggtggtccagctccttgagcggttctacgaccca
atggccggaacagtgctaattgatggcaaagagataaagcacctgaatgtccagtggctc
cgagcacacatgggcatcgtgtcccaggagcccatcctgttcgactgcagcattggtgag
aacattgcttacggagacaacagccgggtggtgtcacaagaggagattgtgcgcgcagcc
aaggaggccaacatccaccccttcattgagacactgcctgacaaatataacaccagagta
ggagacaaaggaacccagctctctggtggccagaagcagcgcatagcaatagctcgtgct
cttgtgagacagcctcgtattttgcttttggatgaagctacatcagctctggatacagaa
agtgaaaaggttgtccaagaagccctggacaaagccagagaaggccgcacctgcatcgtg
atcgctcaccgcctgtccaccatccagaacgcagacctaatagtggtgtttcagaatggc
aaggtcaaggagcatggcacacatcaacagctgctggctcagaaaggcatctacttttcc
atggtcagtgtccagactggagcaaagcgctag
DBGET
integrated database retrieval system
