Leopardus geoffroyi (Geoffroy's cat): 123606517
Help
Entry
123606517 CDS
T10761
Symbol
SNX13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lgf04990
]
123606517 (SNX13)
Domain-containing proteins not elsewhere classified [BR:
lgf04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
123606517 (SNX13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
Motif
Other DBs
NCBI-GeneID:
123606517
NCBI-ProteinID:
XP_045350964
LinkDB
All DBs
Position
A2:complement(110816233..110952499)
Genome browser
AA seq
1177 aa
AA seq
DB search
MPEGSLSTGHLPPSSRDARGPQRHQSKTRPLPISLHPRAGLRRRAAEHDPTRRASAPAPG
LASHWAPSLLPAIASYPGNPALEASPRWPSGPRGARLRFPTRRRHGDGHESPAAPAPTNG
SARRRETRTSLFQDGGASVASSRAGGKPAKPSKAAARETTEGAVSAVGGGSGSFRCCYGC
CHAARLGRSSLPRGVIMLTETSLSIWGWGSLGIVLSLITFGPFVIFYLAFYILCFVGGGF
VVTLLFGKTNSEKYLEQCEHSFLPPTSTGIPKCLEEMKREARTIKIDRRLTGANIIDEPL
QQVIQFSLRDYVQYWYYTLSDDESFLLEIRQTLQNALIQFATSWWTCGFMSWWICGLFPP
FGYYEEWSKEIDWQPYFTTRIVDDFGTHLRVFRKAQQKITEKDDQAKGTAEDLVDTFFEV
EVEMEKDVCRDLVCTSPKDEEGFLRDLCEVLLYLLLPPGDFQNKIMRYFVREILARGVLL
PLINQLSDPDYINQYIIWMIRDSNCNYEAFMNIIKLSDNIGELEAVRDKAVEELQYLRSL
DTVGDDINTIKNQINSLLFVKKVCDSRIQRLQSGKEINTVKLAANFGKLCTVPLDSILVD
NVALQFFMDYMQQTGGQAHLFFWMTVEGYRVTAQQQLEVLLSRQKDGKHQTNQTKGLLRA
AAVGIYEQYLSEKASPRVTVDDYLVAKLADTLNHEDPTPEIFDDIQRKVYELMLRDERFY
PSFRQNALYVRMLAELDMLKDPSFRGSDDGDGESFNGSPTGSINLSLDDLSNVSSDDSVQ
LHAYISDTGVCNDHGKTYALYAITVHRRGLNSEEMWKTYRRYSDFHDFHMRITEQFENLS
SILKLPGKKTFNNMDRDFLEKRKKDLNAYLQLLLTPEMMKASPALAHYVYDFLENKAYSK
GKGDFARKMDTFVNPLRNSMRNVSNAVKSLPDSLAEGMTKMSDNMGKMSERLGQDIKQSF
FKVPPLIPKTDSDPEHCRVSAQLDDTVDDNIPLRVMLLLMDEVFDLKERNQWLRRNIKNL
LQQLIRATYGDTINRKIVDHVDWMTSPEQVADLVKRFRDAFWPNGILAETVPCRDKAIRM
RTRVAGKTKLLSIMPDELKHIIGAETTRKGILRVFEMFQHNQLNRRMVYVFLEGFLETLF
PQYKFRELFNKLHSRSKQIQKYKQKLQTTQAPSLQKR
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgccagagggaagtttgtctacaggacatctgcctcccagttcccgagacgcgcgaggt
ccgcagcgccatcagtcgaagactcggcctctgcccatctcactccaccctagggccggc
ctacgccggcgagctgcggagcacgacccaacccggagggcgagcgcgcccgctcccggg
ctggcctcacactgggccccgtctctactaccggcaatcgcaagttaccctgggaaccca
gctttggaggcctcaccgcggtggccgagtgggccgcgaggcgcccgcctccgcttcccc
acgcgccggcgccatggagacggtcacgagtcgccggcggctcctgcgcccaccaatgga
agcgcacgtcgcagagagacgcggacgtcgctcttccaagatggcggcgcgtccgtcgcg
agcagccgggccggggggaagccagcgaagccgagtaaagccgccgcccgggagacgact
gaaggagctgtttcggccgttggcggcggctcgggcagttttcgctgctgctacggctgt
tgccatgcggcgaggctagggaggagctcacttccccggggtgtaataatgttaacagag
accagtctatccatatggggatggggaagccttggcattgtcctttctctaataaccttt
ggaccctttgtaatattttatttggcattttatatcctctgctttgtgggtgggggtttt
gtggttactctcctgtttggaaaaacaaactcagagaagtacctagaacagtgtgaacac
tcatttcttcctccaacatccactgggattcctaagtgcttagaagaaatgaaacgagaa
gccaggactataaagattgatagaagattgacaggtgccaatataattgatgaacctctc
cagcaagttatccagttttccttgagggattatgtccagtactggtattatacactaagt
gatgatgaatcttttcttcttgaaattaggcagactcttcaaaatgcactcattcaattt
gctactagttggtggacatgtggattcatgagctggtggatatgtggattgtttccacct
tttggatattatgaagaatggtcaaaagaaatagactggcaaccttattttactacacgc
attgtagatgattttggcacacacctacgagtattcagaaaggctcaacagaagataaca
gaaaaagatgatcaagcaaaaggtacagcagaagatcttgtggataccttctttgaagtt
gaagttgaaatggagaaggatgtttgccgtgatctagtgtgcacttctcccaaagatgaa
gaaggattcctaagggatctgtgtgaggtcttactatatttattgctacctcctggagat
ttccagaacaagatcatgcgatactttgtcagggaaatccttgcacgaggagttcttctt
ccattaataaatcaactcagtgatcctgattatattaatcaatatatcatatggatgatc
cgtgattctaattgcaactatgaggcctttatgaacattattaaattgagtgacaatatt
ggagagctagaagcagtcagagataaggcagtagaagaattacagtatcttcgatctcta
gatacggttggtgatgatatcaacactatcaaaaatcaaataaatagcttattatttgta
aaaaaagtatgtgactcaagaatacagcggttacagtcaggcaaagaaataaatactgtg
aaactggcagcaaactttgggaaactttgcacagtccctttggacagcattcttgtagac
aatgttgcactacagttttttatggattacatgcagcaaactggaggtcaagcacacctc
ttcttctggatgacagtggaaggataccgagttacagcccaacagcaactagaagtttta
ttaagtcgtcagaaggatggaaaacatcaaactaaccaaaccaaaggtcttctaagagca
gctgctgttggaatatatgaacagtatttatcagaaaaggcatctccaagagttactgtt
gatgattatttggtagcaaaattagcagatactttgaatcatgaagatccaacccctgaa
atctttgatgacattcaaaggaaggtttatgaattgatgctacgagatgaaagattttat
ccttccttcagacagaatgcactttatgtgcgcatgttagccgagctggatatgttaaaa
gatcctagtttcagaggatcagatgatggtgatggagaatcttttaatgggtctcctaca
ggaagcataaatttgtcgttagatgacctttcaaatgtatcttctgatgactcagtacaa
cttcatgcttacatttcagacactggcgtttgtaatgatcatggcaagacgtacgcatta
tatgccatcactgttcaccggcgtggtcttaacagcgaggagatgtggaaaacctatcgc
cgttacagcgactttcacgacttccacatgagaatcactgaacagtttgaaaatctgtca
agtatattgaagcttcctggtaaaaagacgtttaataatatggatagagattttttagaa
aagagaaaaaaggatctaaatgcatatttgcagttactactaactcctgaaatgatgaaa
gcatccccagctttggctcactatgtgtatgatttccttgagaacaaagcctacagtaaa
gggaaaggggattttgctcgcaagatggacacttttgtaaatccacttcgaaattctatg
aggaatgtttcaaatgcagttaaatccctccctgatagcttggcagagggaatgactaaa
atgtcagacaacatgggcaaaatgtcagaaagattaggccaagacataaagcaatcattt
ttcaaggtgcctcctttaattccgaagactgattcagatcctgaacattgtcgggtctca
gctcaacttgatgatactgtggatgacaatattccacttagagtaatgctgcttcttatg
gatgaagtatttgacttaaaagagaggaatcagtggttgcgaaggaatatcaaaaaccta
cttcagcagcttattagagccacttatggtgatactattaacagaaaaatagttgaccat
gttgattggatgacctcacctgagcaagtagcggacttagtgaaacgtttcagagatgcc
ttttggccaaatggcattttagcagagactgttccatgcagagataaagctattcgaatg
agaacaagagttgcaggaaaaactaaattactttcaattatgccagatgaactgaagcac
attattggggctgagacaacacggaaaggtattcttcgtgtttttgaaatgtttcagcac
aaccagttaaataggagaatggtttatgtcttcctggaaggctttttggaaaccttattt
ccacagtataaatttcgtgaacttttcaacaaactgcattcacggtcaaagcagatacag
aaatataaacagaaacttcagactactcaagcgccttctttacagaaaaggtga
DBGET
integrated database retrieval system