Leopardus geoffroyi (Geoffroy's cat): 123607133
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Entry
123607133 CDS
T10761
Symbol
SMARCD3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03082
ATP-dependent chromatin remodeling
lgf04714
Thermogenesis
lgf05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123607133 (SMARCD3)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
123607133 (SMARCD3)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
123607133 (SMARCD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgf03021
]
123607133 (SMARCD3)
03036 Chromosome and associated proteins [BR:
lgf03036
]
123607133 (SMARCD3)
Transcription machinery [BR:
lgf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
123607133 (SMARCD3)
Chromosome and associated proteins [BR:
lgf03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
123607133 (SMARCD3)
PBAF complex
123607133 (SMARCD3)
GBAF(ncBAF) complex
123607133 (SMARCD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
123607133
NCBI-ProteinID:
XP_045352162
LinkDB
All DBs
Position
A2:complement(163638664..163668802)
Genome browser
AA seq
513 aa
AA seq
DB search
MAADEVAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGSPYMGSPAVRPGL
APAGMEPARKRAAPPPGQSQAQSQGQPVPTAPARSRSAKRRKMADKILPQRIRELVPESQ
AYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAKPDAEDSDGSIA
SWELRVEGKLLDDVRPGPAPPAPNASCPHSPCPAPTVPVPLPQPSKQKRKFSSFFKSLVI
ELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDLSVRCTLLLMLDYQPPQFKLDPRLA
RLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIFDCPRLKFSEIPQRLT
ALLLPPDPIVINHVISVDPSDQKKTACYDIDVEVEEPLKGQMSSFLLSTANQQEISALDS
KIHETIESINQLKIQRDFMLSFSRDPKGYIQDLLRSQSRDLKVMTDVAGNPEEERRAEFY
HQPWSQEAVSRYFYCKIQQRRQELEQSLVVRTT
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggacgaagttgccggaggggcgcgcaaagccacgaaaagcaaactttttgag
tttctggtccatggggtgcgccccgggatgccgtctggagcccggatgccccaccagggg
gcgcccatgggccccccgggctccccgtacatgggcagccccgccgtgcgacccggcctg
gcccccgcgggcatggagcccgcccgcaagcgagcagcgcccccgcccggccagagccag
gcccagagccagggccagccggtgcccaccgcccccgcgcggagccgcagtgccaagagg
aggaagatggctgacaaaatcctccctcaaaggatccgggagctggtccccgagtcccag
gcttatatggacctcctggcatttgagaggaaactagatcaaaccatcatgcggaagcgg
gtggacatccaagaggctctgaagaggccgatgaagcaaaagcggaagctgcgtctttat
atctccaatacgtttaaccctgcgaagcccgatgctgaagattccgatggcagcatcgcc
tcctgggagctgcgggtggaggggaagctcctggatgacgtacgtcctggcccagcccca
cccgctcccaacgcatcctgcccccacagtccctgtcctgcccccacggtccctgttcct
ctcccacagcccagcaagcagaagcggaagttctcttccttcttcaagagtttggtcatt
gagctggacaaagacctttatggccctgacaaccacctagttgagtggcaccgcacaccc
acgacccaggagacggacggcttccaggtgaagaggccgggggacctgagcgtacgatgc
acgctgcttctcatgctggactaccagcctccccaattcaaactggatccccgcttggcc
cggctgctggggttgcacacacagagccgctccgccatcgtgcaggccctgtggcagtat
gtgaaaaccaacaggctgcaggactcacatgacaaggaatacatcaatggggacaaatat
ttccagcagatatttgattgcccccggctgaagttttctgagattccccagcgcctcaca
gctctgctgttgccccctgacccaattgtcatcaaccacgtcatcagcgtggacccgtcg
gaccagaagaagacggcgtgctatgacattgatgtggaggtggaggagcccctgaaggga
cagatgagcagcttccttctgtccacggccaaccagcaggagatcagtgctctggacagt
aagatccatgagacgattgagtccataaaccagctcaagatccagagggacttcatgcta
agcttctccagagaccccaaaggctacatccaagacctgctccgctcccagagccgggac
ctcaaggtgatgacggacgtggcaggcaaccctgaggaggagcgccgggctgagttttac
caccagccctggtcccaggaagccgtcagccgctatttctactgcaagatccagcagcgc
cggcaggagctggagcagtcgctggtcgtgcgcaccacctag
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