Leopardus geoffroyi (Geoffroy's cat): 123607387
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Entry
123607387 CDS
T10761
Symbol
COLGALT1
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf00310
Lysine degradation
lgf00514
Other types of O-glycan biosynthesis
lgf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
123607387 (COLGALT1)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
123607387 (COLGALT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lgf01003
]
123607387 (COLGALT1)
Enzymes [BR:
lgf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
123607387 (COLGALT1)
Glycosyltransferases [BR:
lgf01003
]
O-Glycan biosynthesis
O-linked Gal type
123607387 (COLGALT1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
123607387
NCBI-ProteinID:
XP_045352516
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Position
A2:13072974..13092770
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AA seq
623 aa
AA seq
DB search
MAAAPRACRRGWRPRPVLLLLLLLALPPPGGPPGAAAYFPEERWSPESPLQAPRVLIALL
ARNAAHALPATLGALERLRHPRERTALWVATDHNSDNTSAVLREWLVAVKSWYHSVEWRP
AEEPRSYPDEEGPKHWSDSRYEHVMKLRQAALKSARDMWADYILFVDADNLILNPDTLSL
LIAENKTVVAPMLDSRAAYSNFWCGMTSQGYYKRTPAYIPIRKRDRQGCFAVPMVHSTFL
IDLRKAASRNLAFYPPHPDYTWSFDDIIVFAFSCKQAEVQMYVCNKEVYGFLPVPLRAHS
SLQDEAESFMHVQLEVMVKHPPAEPSRFISVPTGTPDKMGFDEVFMINLKRRQDRRDRML
RALRAQEIECRLVEAVDGKAMNTSQVEALGIQMLPGYRDPYHGRPLTKGELGCFLSHYNI
WKEVVDRGLRKSLVFEDDLRFEIFFKRRLLNLMRDVEREGLDWDLIYVGRKRMQVERPEK
AVPRVRNLVEADYSYWTLAYVISLQGARKLLAAQPLSKMLPVDEFLPVMFDKHPVSEYKA
HFSPRNLRAFSVEPLLIYPTHYTGDDGYVSDTETSVVWNNEHVKTDWDRAKSQKMRQQQA
LSREAKNSDVLQSPLDSAARDEL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccccacgcgcgtgcaggcggggctggcggccgcgcccggtgctgctgctg
cttctgctgctggcgctgccgcccccggggggcccgccgggcgccgccgcctacttcccc
gaggagcgctggagcccggagtcgccgctgcaggcgccgcgagtcctcatcgcgctgctg
gcgcgcaacgcggcccacgcgctgcccgccacgctgggcgcgctcgagcggctgcggcac
ccgcgggagcgcacggcgctgtgggtggccacggaccacaactcagacaatacgtcggct
gtgctgcgggaatggctggtggctgtgaagagttggtaccactctgtggagtggcggccg
gcggaggagcccaggtcctacccggacgaggagggccccaaacactggtccgactcgcgc
tacgagcacgttatgaagttgcgccaggcagccctgaaatctgcccgggacatgtgggcc
gattacatcctgtttgtggatgcagacaacctgatcctcaaccctgacacactgagcctc
ctcatcgccgagaataagaccgtggtggccccgatgctggattcgcgggctgcgtactcc
aacttctggtgtgggatgacttcccagggctactacaaacgcacacctgcctacatcccc
attcgcaagcgggaccgtcagggctgctttgcggttcccatggtgcactcgaccttcctg
atcgacctgcggaaggcggcatccaggaacttggcattctaccctcctcaccccgactac
acctggtcctttgacgacatcatcgtctttgccttctcctgcaagcaagcagaggtccag
atgtacgtctgcaacaaggaggtatatggcttcctgccagtgccgctgcgggcgcacagc
agcctccaggatgaggccgagagcttcatgcacgtgcagctggaagtcatggtgaagcac
ccaccggcggagccctccaggttcatctccgtgcccaccgggacgcctgacaagatgggc
tttgacgaggtcttcatgatcaacctgaagcgacggcaggaccggcgggaccgcatgctg
cgggcgctgcgggcgcaggagatcgagtgccggctggtggaggcggtggacggcaaagct
atgaacaccagccaggtggaggcgctgggcatccagatgctgcccggctaccgggacccc
taccacgggcggcccctcaccaagggcgagctgggctgcttcctcagccactataacatc
tggaaggaggtggtggaccgagggctgcggaagtcgcttgtgttcgaggacgacctgcgc
tttgagatcttcttcaagagacgcctgctgaacctcatgcgggacgtggaacgggagggt
ctggactgggacctcatctacgtgggccggaagaggatgcaggtggagcggccggagaag
gctgtgccccgtgtgaggaacctggtggaggccgattactcctactggacgctggcctac
gtgatctccctgcaaggcgcccgcaagctgctggcggcccagccgctctccaagatgctg
cctgtcgacgagttcctgcccgtcatgtttgacaagcacccagtgtctgagtacaaggcc
cacttctcgccccgcaaccttcgcgccttctcggtggagcccctgctcatctaccccacg
cactacacgggggacgatggctacgtgagtgacacggagacctcagtcgtgtggaacaac
gaacacgtcaagaccgactgggaccgtgccaaatcccagaagatgcgccagcagcaggca
ctgagtcgcgaggccaagaactcagacgtgctgcagtccccgctggacagcgccgcccga
gacgagctctga
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