Leopardus geoffroyi (Geoffroy's cat): 123607504
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Entry
123607504 CDS
T10761
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP isoform X1
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lgf04121
]
123607504
Enzymes [BR:
lgf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123607504
Ubiquitin system [BR:
lgf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123607504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-C3HC4_4
zf-ANAPC11
zf-RING_11
zf-C3HC4_3
zf-RING_Vps41
Crescentin
WEMBL
HIP1_clath_bdg
DUF3450
OVT1
Laminin_II
zf_RING_Vps8
zf-RING-like
GAS
HMMR_N
zf-RING_16
Zn_ribbon_8
Sec3_CC
DUF745
MscS_porin
RINGv
FANCL_C
RING_XB3-XBAT31
SAT
Motif
Other DBs
NCBI-GeneID:
123607504
NCBI-ProteinID:
XP_045352849
LinkDB
All DBs
Position
A2:complement(18884606..18908597)
Genome browser
AA seq
535 aa
AA seq
DB search
MVRPIGTQPSGSASTLLPPLPVHSRKSRSGAKFEACGEAGTGVGARSQSWTRRGFLGCLT
PLGPVIMPIRALCTICSDFFDHSRDVAAIHCGHTFHLQCLIQWFETAPSRTCPQCRIQVG
KRTIINKLFFDLAQEEESVLDAEFLKNELDNIRAQLSQKEKEKRDSQVIIDTLRDTLEER
NATVESLQKALDKAEMLCSTLKKQMKYLEQQQDETKQAQEEARRLRTKMKTMERIELLLQ
SQRPEVEEMIRDMGVGQSAVEQLAVYCVSLKKEYENLKEARKASGELADKLKKDLFSSKS
KLQTVYSELDQTRLELRSAQKDLQSADKEITSLKKKLSMLQETLNLPPVDSETVNRLVLE
SPAPLEMLNLKLRRPAFGDDIDLNATFDVDTPPAQPASIQQGRAKKLCQEIAHSPVQDIP
KKMPNDPKQESQLSLGGQRCMGEPDEELASAFPVFIRNAVLGQKQPKRAKAEPRRSTDAV
RTGFDGLGGRTKFIQPTDTTMIRPLPVKPKPKAKQRVKARTVLPPSQAKLDTFLW
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggttcgtccaatcgggacccagccttcaggctccgcctctaccttgctgccaccactt
ccggtccactcccggaagtcccgcagtggagccaaatttgaagcctgcggagaggcgggg
acgggggtgggggcgcggtcgcaaagctggacccgtcgaggtttccttggctgcctgacc
cccttaggaccagtcatcatgcctatccgtgcgctgtgcaccatctgctccgacttcttt
gaccactcccgagatgtggccgccatccactgcggccataccttccacctacagtgccta
attcagtggtttgagacagcaccaagtcggacctgcccacagtgccgaatccaggttggc
aaaagaaccattatcaataagctcttctttgaccttgcccaagaggaggagagtgtctta
gatgcagaattcttaaagaatgaactggataatatcagagcccagctttcccagaaagag
aaggagaaaagggatagccaggtcatcatcgacactctgcgggacaccttggaagagcgc
aacgccactgtggaatctctgcagaaggctttagacaaggccgaaatgctatgctccacc
ctcaagaaacagatgaagtacttggagcagcagcaggatgaaaccaaacaagcacaggag
gaggcccgccggctcaggaccaagatgaagaccatggagaggattgagctcctactccag
agccagcggcccgaggtggaggagatgatccgagacatgggtgtgggacagtcagcggtg
gagcagctggctgtgtactgcgtgtccctcaagaaagagtatgagaatctaaaagaggca
cggaaggcctcaggggagctggctgacaaactgaagaaggacttattttcttccaaaagc
aagttgcagacagtctactctgaactagaccagacaaggttggagctgaggtcagcgcag
aaggacttacagagtgctgacaaggaaatcacaagcctgaaaaaaaagctatcgatgctg
caggaaaccctgaacctgccaccagtggacagtgagactgtcaaccgcctggttttagag
agcccagcccctttggaaatgctgaacctgaagcttcgccgaccagccttcggtgatgat
attgacctcaatgccacctttgatgtggacacccctccagcccagcctgccagcatccag
cagggccgtgccaagaagctctgccaagagatagcccactctcctgttcaggacatcccc
aagaagatgcccaatgaccccaagcaggagtcccagctctcgctgggtggccagcgctgt
atgggagagccagatgaggagctggctagtgcctttcctgtcttcatccggaatgctgtc
ctaggccagaaacagcccaagagggccaaagcagagccccgtcgcagcacagatgccgta
aggactggcttcgatggtcttggaggtcggacaaaattcatccaacctactgacacaact
atgatccgcccactgcctgttaagcccaagcccaaggctaagcagagagtcaaggcaagg
acagtgctccctccctcccaggccaaactggacaccttcttgtggtag
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integrated database retrieval system
