Leopardus geoffroyi (Geoffroy's cat): 123607968
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Entry
123607968 CDS
T10761
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lgf03016
]
123607968 (CDKAL1)
Enzymes [BR:
lgf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
123607968 (CDKAL1)
Transfer RNA biogenesis [BR:
lgf03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
123607968 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
123607968
NCBI-ProteinID:
XP_045353196
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Position
B2:complement(8192971..8908615)
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AA seq
576 aa
AA seq
DB search
MPSASCDSLLDDIEDIVSQEDLKPQDRHFSRKHVVPKVRKRNTQKYLQDENSPPSNSTIP
GIQKIWMRTWGCSHNNSDGEYMAGQLAAYGYEITENASDADLWLLNSCTVKNPAEDHFRN
SIKKAQEENKKIVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQ
KKNNGKRLGGAPLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGNLASYPIDELVDR
AKQSFQEGVCEIWLTSEDTGAYGRDIGTNLPTLLWKLVEVIPRGAMLRLGMTNPPYILEH
LEEMAKILNHPRVYAFLHIPVQSASDSVLTEMRREYCVADFKRVVDFLKEKVPGITLATD
IICGFPGETDQDFQETVKLVEEYKFPSLFINQFYPRPGTPAAKMAQIPAQVKKQRTKDLS
RVFHSYNPYDHKIGERQQVLVTEESFDSKFYVAHNRFYEQVLVPKDPTFMGKMIEVDIYE
SGKHFMKGQPVSDARVYTPSISKPLAKGEVSGLPEELRNRLGNHPSSVSHTSAVGRDFAS
SRMALRLQNLRRDRALRVSVGLALLALLLAFFCQNL
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgcctcctgtgattctctcctggatgacatagaagatattgtgtcacaggaa
gatttaaagccacaagataggcatttttcacggaagcatgttgttccaaaggtgcgaaag
cgaaacacccaaaaatatttgcaagatgaaaacagcccaccgagcaatagcactattcca
ggcatacagaaaatttggatgcgaacatggggttgttctcataataattcggatggagaa
tatatggctggacaactagctgcttatggatatgaaattacagaaaatgcatcagacgca
gatctatggctcctgaatagttgcactgtaaaaaacccagctgaagaccactttagaaac
tccataaaaaaagctcaagaggagaacaagaaaattgtgctagctggatgtgttcctcaa
gcccagcctcggcaggactaccttaaaggactgagtatcatcggggttcaacagatagat
cgagtggtagaggttgtggaggaaaccattaaaggtcattctgtgagactacttggtcag
aaaaagaataacggaaagcggttgggtggagcgccattggatttgccaaagatcaggaag
aatccactgatagaaatcatttccatcaatactgggtgtctcaatgcgtgtacctactgc
aaaactaaacatgccagagggaatttggcgagttatccaattgatgaactagtcgataga
gccaaacagtcttttcaagagggcgtctgtgagatatggttgaccagtgaagacacgggg
gcttatggcagagacattggcaccaatctccccacactgctgtggaaactggtcgaagtg
atccctcggggagcaatgctgaggcttggcatgacgaatcccccctatattttagagcat
ctggaggaaatggcaaaaatccttaatcatcccagagtctatgcttttctgcacataccg
gtccagtctgcctctgactctgtactcacggaaatgagaagagaatactgcgtggccgac
ttcaaaagagtggtggattttctgaaagagaaagttcctggaataactcttgccacagat
attatctgtggttttcctggagaaacagaccaagattttcaagaaacagtgaaactcgtt
gaagagtacaaattcccaagcctctttattaaccagttctacccaagaccagggactcct
gctgcaaaaatggcacaaattccagcacaagtgaaaaagcaaagaacaaaagatctctct
cgggtattccattcttacaatccgtatgatcacaagattggtgaaagacaacaagtgtta
gtgacagaagaatcttttgattccaagttctatgtcgcacacaatcgattctatgagcag
gttttagtgccaaaggaccccacattcatggggaagatgatcgaagtggacatttatgaa
tcaggaaaacattttatgaaagggcagccggtatcagacgccagagtatacacgccatcc
atcagcaaaccattagcgaagggagaagtctcgggtttgccagaggaactcagaaatagg
cttgggaatcacccgagttcagtatcccacacttctgccgtcgggcgagacttcgcgagc
tccaggatggccctccgcttgcaaaatctccgtcgagaccgtgcactgagggtgtccgtg
ggcctggctctgttggctcttcttctcgcctttttttgtcaaaatctctaa
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