Leopardus geoffroyi (Geoffroy's cat): 123607983
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Entry
123607983 CDS
T10761
Symbol
KDM1B
Name
(RefSeq) lysine-specific histone demethylase 1B isoform X1
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lgf03036
]
123607983 (KDM1B)
Chromosome and associated proteins [BR:
lgf03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
123607983 (KDM1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
Pyr_redox
Pyr_redox_2
Thi4
zf-CW
SWIRM
DAO
HI0933_like
FAD_binding_3
Pyr_redox_3
Lycopene_cycl
FAD_binding_2
FAD_oxidored
NAD_binding_9
GIDA
AlaDh_PNT_C
2-Hacid_dh_C
NAD_binding_7
KARI_N
zf-RING_2
TrkA_N
Shikimate_DH
YjeF_N
Motif
Other DBs
NCBI-GeneID:
123607983
NCBI-ProteinID:
XP_045353222
LinkDB
All DBs
Position
B2:complement(11155830..11217941)
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AA seq
921 aa
AA seq
DB search
MARAGPAPRQRRRRGPYSSLVPPAPPTPGHAVTGAEAAAAAAAERGLRLAARIVLSCARS
ARLRRGAGSPGRRAASRLRSQRCLLPPTPCTFPAQRFSETMATPRRRTKKKASFDHSPDS
LPLRSSGRQAKKKATETTDEDEDGSSEKKYRRCEKSGCTVACPVCFASASERCAKNGYTS
RWYHLSCGEHFCNECFDHYYRSHKDGYDKYTTWKKIWTSNGKTEPSPKAFMADQQLPYWV
QCTKPECRKWRQLTKEIHLTPQIARTYRCGMKLNSTTVKPETSDHCCLPEDLRVSEVSNH
WWYSMLILPPLLKDSVAAPLLSAYYPDCVGMSPSCASTHRAAGSTSPGKLEPSKAAPSAP
APGMNRYFQPFYQPNECGKALCVRPDVMELDELYEFPEYSRDPTMYLALRNLILALWYTN
CKEALTPQKCIPHIIVRGLVRIRCVQEVERILYFMTRKGLINTGVLNVGTDQHLLPKDYH
NKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNG
CINNPVALMCEQLGISMHKFGERCDLIQEGGRITDPTIDKRMDFHFNALLDVVSEWRKDK
TQLQDVPLGEKIEEIYKAFIQESGIQFSELEQQVLHFHLSNLEYACGSSLHQVSARSWDH
NEFFAQFAGDHTLLTPGYSVIIEKLAEGLDIRLESPVQSIDYSGDEVRVTMTDGTGCTAQ
KVLVTVPLALLQKGAIHFNPPLSDKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFF
GHVPPSAGKRGLFAVFYDMDPQKKQSVLMSVVAGEAVASVRTLDDKQVLQQCMAALRELF
KEQEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDILAEEIQGMVFFAGEATNRHF
PQTVTGAYLSGVREASKIAAF
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggccagggcggggccagcgccgcggcaaaggcgaaggcggggaccctactcctccctg
gtcccgccggctcctcccactccgggtcacgccgtgacaggggcggaagcggcggcggcg
gcggcggccgagcgggggctgcggctcgcggcgcggatcgtgctgtcctgtgcgcgcagc
gcgcggctccggagaggcgccggcagcccgggccggcgtgcggcgtctcgcctgcgctcc
cagcggtgccttctccccccgactccttgcacctttccggcgcaaagattttctgaaaca
atggcgacccctcggaggaggacaaagaaaaaggcatcttttgatcattctccagatagc
ctgcctttgaggagctccggtaggcaggccaagaagaaagcaacagagacaacagacgag
gatgaagacggcagttcagagaagaaatacaggagatgtgaaaagtcaggctgcacagta
gcgtgtcccgtgtgctttgcaagtgcttctgaaagatgtgccaaaaatggctacacgtcc
cgatggtatcacctctcctgtggggagcatttctgtaacgaatgctttgaccattactac
agaagccataaggatggatatgacaaatatactacctggaaaaaaatatggactagcaac
gggaaaaccgaacctagccccaaagctttcatggcagaccagcagctcccgtactgggtt
caatgtacaaaacctgagtgtagaaaatggagacaacttaccaaggaaatccatcttact
ccacagatagcaaggacctaccgatgtggtatgaaattgaattctactactgttaagcct
gagacctcagatcattgttgccttccagaggatctaagggtgtcggaagtttccaaccac
tggtggtactccatgctcatcctccctcctctgctgaaagacagcgttgcggcacccctg
ctctctgcctactaccccgactgcgtgggcatgagcccctcctgcgccagcacgcaccgc
gcggccggcagcaccagccccgggaagctggagccctccaaggcggccccctctgcgccg
gctccaggcatgaaccggtacttccagcctttctatcagcccaacgagtgcggtaaagcc
ctgtgcgtgaggccagacgtgatggagctggacgagctctatgagttcccggagtattcc
cgagaccccaccatgtacctggctctgaggaacctcatcctcgcgctgtggtacactaac
tgcaaagaagctcttacacctcagaaatgtattcctcacatcatcgttcggggtctcgtg
cgcatccgatgcgttcaggaagtggagaggatactttattttatgacgagaaaaggtctc
atcaacacaggggttcttaacgtcggcaccgaccagcatcttcttcctaaagattaccac
aacaaatcagtcatcattattggggctggtccagcaggattagcagctgctaggcaactg
cataactttggaattaaggtgactgtcctggaagccaaagacagaatcggaggccgagta
tgggatgataaatctttcaaaggcgtcacagtgggaagaggggcgcagattgtcaatggc
tgtatcaacaacccggtagcactcatgtgtgaacaacttggcatcagcatgcataaattt
ggagagagatgtgacttaattcaggaaggtggaagaataactgaccccactattgacaag
cgcatggattttcattttaatgctctcttggatgttgtctctgagtggagaaaggataag
actcagctccaagatgttcccttaggagaaaagatcgaggagatctacaaagcctttatt
caggagtctgggatccagttcagtgaacttgaacaacaggtgcttcacttccacctgagt
aacctggagtacgcctgtgggagcagtctccatcaggtgtctgctcgctcctgggaccat
aacgaattctttgctcagtttgctggtgaccacactctgctaacgcctggctactctgta
atcattgaaaaactggcagaaggactagacattcgactggagtctccagtgcagagcatt
gattattctggagatgaggtgcgggttaccatgacggatgggacaggatgtacagcacag
aaggtgttggtcactgtacccctggccttactgcagaaaggtgccattcacttcaaccca
ccgctgtcggacaagaagatgaaggctatcaacagcttaggcgcgggcatcattgaaaag
attgccttgcagtttccatacagattttgggacagtaaagttcaaggggctgactttttc
ggtcacgttccgcctagtgccggcaagcggggactttttgctgtgttctatgacatggat
ccccagaagaagcagagcgtgctgatgtcggtggtcgccggggaggccgtggcgtctgtc
aggaccctggatgacaagcaggtgctccagcagtgcatggccgccctccgggagctgttc
aaggagcaggaggtccccgaccccacgaagtatttcgtcactcggtggagcacggacccc
tggatccagatggcgtacagcttcgtgaagacgggagggagcggagaagcctacgatatc
ctcgctgaggagatacagggaatggtcttctttgctggcgaggcaacaaacaggcatttc
ccacaaactgttacaggggcatatttgagtggtgttcgagaagcaagtaagattgcagca
ttctga
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