Leopardus geoffroyi (Geoffroy's cat): 123608599
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Entry
123608599 CDS
T10761
Symbol
RIMS1
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04721
Synaptic vesicle cycle
lgf04723
Retrograde endocannabinoid signaling
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09150 Organismal Systems
09156 Nervous system
04723 Retrograde endocannabinoid signaling
123608599 (RIMS1)
04721 Synaptic vesicle cycle
123608599 (RIMS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lgf04131
]
123608599 (RIMS1)
Membrane trafficking [BR:
lgf04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
123608599 (RIMS1)
Small GTPases and associated proteins
Rab associated proteins
123608599 (RIMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
PDZ
FYVE_2
PDZ_6
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-GeneID:
123608599
NCBI-ProteinID:
XP_045354663
LinkDB
All DBs
Position
B2:65146425..65636089
Genome browser
AA seq
1664 aa
AA seq
DB search
MSSAVGPRGPRPPTVPPPMQELPDLSHLTEEERNIIMAVMDRQKEEEEKEEAMLKCVVRD
MAKPAACKTPRNAENQPHQPTPRLHQQFESYKEQVRKIGEEARRYQGEHKDDAPTCGICH
KTKFADGCGHLCSYCRTKFCARCGGRVSLRSNNEDKVVMWVCNLCRKQQEILTKSGAWFF
GSGPQQPSQDGTLSDTATGAGSEVPREKKARLQERSRSQTPLSTAAASSQDTAPPSAQPD
RSKGAESSQQALGPEQKQVSSRSRSEPPRERKKTPGLSEQNGKGAQKSERKRVPKSSVQP
GEGAVEERERKERRESRRLEKGRSQDYPDVPEKREDRKAVDDEKQRKEEEYQTRYRSDPN
LARYPVKPPPEEQQMRMHARVSRARHERRHSDVALPRTEAGAAPPDAKAGKRAPPPARAS
PPESPRAYSAERTAEVRTPGAKQLANHSPPAPRHGPVPAEVLEPKAQEPLRKQSRLDPSS
AVLIRKSKREKVETMLRNDSLSSDQSESVRPSPPKPHRSKRGGKKRQMSVSSSEEEGVST
PEYTSCEDVELESESVSEKGDLDYYWLDPATWHSRETSPISSHPVTWQPSKEGDRLIGRV
ILNKRTTMPKESGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADVVGHLRAGDEVLEWN
GKPLPGATNEEVYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPPLESSSSSFESQKME
RPSISVISPTSPGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQATDLPTRVDGRPRNP
YVKMYFLPDRSDKSKRRTKTVKKVLEPKWNQTFVYSHVHRRDFRERMLEITVWDQPRVQE
EESEFLGEILIELETALLDDEPHWYKLQTHDESSLPLPQPSPFMPRRHIHGESSSKKLQR
SQRISDSDISDYEVDDGIGVVPPVGYRSSARESKSTTLTVPEQQRTTHHRSRSVSPHRGD
DQGRPRSRLPNVPLQRSLDEIHPTRRSRSPTRHHDASRSPVDHRSRDVDSQYLSEQDSEL
LMLPRAKRGRSAECLHTTRYFVRHYKTLPPKMPLLENSSHWNIYSELQPSLDRARSASTN
CLRPDTSLHSPERERGKWSPSLDRRRPPSPRIQIQHASPENDRHSRKSERSSIQKQTRKG
TASDAERVLPPCLSRRGYAALRATDQPVLRGKHPARSRSSEHSSVRTLCSTHHLAPGGSA
PPSPLLTRMHRQASPTHPPPADTSFSNRRGRQLPQVPVRSGSIEQEQEKYNSSTKASLVV
EERTRQMKMKVHRFKQTTGSGSSQELDREQYSKYNIHKDQYRSCDNVSAKSSDSDVSDVS
AISRTSSASRLSSTSFMSEQSEHPRGRISSFTPKMQGRRMGTSGRAIMKSTSVSGEMYTL
EHNDGSQSDTAVGTVGGGGKKRRSSLSAKVVAIVSRRSRSTSQLSQTESGHKKLKSTIQR
STETGMAAEMRKMVRQPSRESTDGSINSYSSEGNLIFPGVRLGADSQFSDFLDGLGPAQL
VGRQTLATPAMGDIQIGMEDKKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACI
AKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDL
SSMVIGWYKLFPPSSLVDPTLTPLTRRASQSSLESSTGPPCIRS
NT seq
4995 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggcggtggggccccgcggtcctcgcccacccacggtgcctccccccatgcaa
gagctgcccgacctgagccacctgaccgaggaggagaggaacattatcatggcagtgatg
gaccggcagaaggaagaagaggaaaaagaagaagccatgctcaagtgtgttgtcagggac
atggcgaagcctgctgcctgcaaaacaccaagaaatgctgaaaaccagccccaccaacct
acaccgagattgcatcaacaatttgaaagctataaagaacaagtgaggaagataggggaa
gaagcgcggcgttaccagggagagcacaaagatgatgctccgacctgtggaatctgtcac
aaaacaaagtttgctgatgggtgcggccatctctgctcctactgccgcaccaagttctgt
gcccgctgtggaggccgcgtgtctctgcgatccaacaacgaggacaaagtggttatgtgg
gtatgcaatttatgtcgaaagcaacaagaaatcttaaccaaatctggggcatggttcttt
ggaagtggccctcagcagccaagtcaggatggaaccctaagtgatacagctacaggtgct
ggttctgaggtaccgagagaaaagaaagcacggctccaagaaagatcacggtctcagaca
cccctgagcacagcagctgcctcctcccaggacacagcgcctcccagcgcacagccagac
aggagcaaaggggcggagtcctcacagcaagccctggggcccgaacagaagcaggtttca
tcgaggtctagaagtgaacctccaagagagaggaagaagactccagggctctctgagcag
aatggcaaaggagcccagaagagcgagcggaaacgcgtgcccaagtcctcagtgcagccg
ggagagggggccgtggaagagcgcgagcggaaagaaaggcgggaaagtcgacggcttgag
aaaggacggtcacaggactacccagatgtgccggaaaaacgagaggatcgcaaagcggtg
gacgatgagaagcaaaggaaagaggaggagtaccagacccggtaccgcagcgatccgaac
ctggcgcggtacccggtgaaaccgccgccggaggagcagcagatgcgcatgcacgcccgg
gtgtctcgcgcgaggcacgagcggcgccacagcgacgtggcgctcccgcgcactgaggcc
ggagctgcgccgcccgacgccaaggccggcaagcgcgcaccgccccccgccagggcttcg
ccgccggagtcgccgcgggcctactctgccgagaggactgcggaagtcaggacgccgggc
gccaagcagctggcgaaccacagcccgccggcacccaggcatgggccagtccccgcagaa
gtcctggagcccaaagcccaggagcccctcaggaagcagagccgcctggaccccagctcg
gccgtcctcatcaggaagtccaagcgcgagaaggtggagactatgctgcggaacgactct
ttgagttctgatcagtcggagtccgtgcggccttccccgccgaagccacaccggtccaag
agaggcggcaagaagcggcagatgtccgtgagcagctccgaggaggagggcgtatccacg
ccggagtacaccagctgcgaggacgtggagctggagagcgagagcgtcagcgagaaaggt
gacttggattattactggttggatcctgccacgtggcatagccgggaaacatcacctatt
agttcgcatcctgtaacgtggcaaccatctaaagagggggaccgattaattggacgtgtt
attctgaacaagagaacaaccatgcccaaagaatcaggtgcattactgggtctgaaagtt
gttggaggaaaaatgactgacttaggacgccttggtgccttcatcaccaaagtaaagaag
ggtagccttgcagatgtagttggacacttacgagcaggggatgaagttctagaatggaat
ggtaaacccctgccgggagctacaaatgaagaagtttacaacattattttagaatcaaaa
tcagaacctcaagttgaaattattgtttcaaggcctattggtgatattccacggatccct
gagagctcccatcctccactggagtccagttcaagttcctttgaatctcagaagatggaa
agaccttccatttctgttatttctccaacaagtcctggagctctaaaagatgccccacaa
gtcttgccaggacaactttctgtaaagctgtggtatgataaagtgggacaccagctgatt
gtaaatgttctgcaagcaacagatttaccgacaagagtagatgggcgtcccaggaatccc
tatgtgaaaatgtattttcttccagatagaagtgataaaagcaaaaggaggactaaaaca
gtaaagaaagtactagaaccaaaatggaatcaaacatttgtctattcacatgtacatcgt
agagattttagagaacggatgttagaaataactgtgtgggatcaaccaagagttcaagaa
gaagagagtgaatttcttggagagatcctcatagaattggagacagcacttttagatgat
gagccacattggtataaacttcagacgcatgatgaatcttcactacctctgcctcagcca
tcacctttcatgccaaggcgacacattcatggagaaagctctagcaaaaaactacaaaga
tctcagcgaatcagtgatagtgacatctcagattatgaggttgatgatggtattggagta
gttcctccagtaggttataggtctagtgctagagaaagtaaatctacaacattaactgtg
ccagaacagcaaagaacaactcatcaccgctcacgttcagtatctcctcaccgcggcgat
gatcagggaaggccgcgttcacgtttaccaaatgtgccattacagaggagtttagatgaa
attcatccaacaagaaggtcacgttctccaactagacaccatgatgcctcccgaagtcca
gttgatcacagatccagagatgtggatagtcagtatttatcagaacaagacagtgagctt
cttatgctgcccagagcaaaacgaggacgaagtgcagaatgcctccatactaccagatat
tttgttaggcactataaaacattaccgcctaagatgcctttattagagaacagttctcac
tggaatatttacagtgaactgcagccctcccttgacagggctaggagtgctagtaccaac
tgcttgagaccagatactagtttgcattcaccagaacgagaaaggggtaaatggtccccc
tccctagataggagacgacctcctagccccaggattcaaatccagcatgcatctccggag
aatgacaggcactccagaaagtctgaaagatctagcatccaaaaacagactaggaaaggc
actgcctctgatgcagaaagggttctcccaccatgcctttctagaaggggatacgcagcc
ctaagagcgactgatcagccagtccttaggggaaaacatcccgctcgctcaaggtcgagt
gagcactctagtgtcagaacactgtgttctacccaccaccttgcccctggagggtcggcg
ccaccttctccgcttctgacaagaatgcacagacaagcaagtccgacccatcctcctcct
gcagatacatccttcagcaatcggaggggccggcagctaccacaggtgccagtgagaagc
ggcagtatagaacaagaacaagaaaaatataactcttccacaaaagcaagcttagtagtg
gaggagcgaacaagacagatgaaaatgaaagtgcatcgatttaagcagacaacagggtct
ggttctagtcaagaacttgatcgcgagcaatattccaagtataacatacataaagatcag
tacagaagctgtgataacgtctctgccaaatcatcagatagtgatgtcagtgatgtgtcc
gccatttcccgaaccagcagtgcctcacgcctcagcagcacaagctttatgtcagagcaa
tctgagcaccccaggggtaggatcagttcatttacccctaaaatgcaaggcagacggatg
gggacttcaggaagagccatcatgaagagcaccagtgtgagtggggagatgtacacactg
gagcataatgacggcagtcagtccgacacagctgtgggtacagttggaggaggtggaaag
aaaaggagatccagcctgagtgccaaagtggttgccatagtgtctagaaggagtagaagc
acatcccagctaagccaaacagagtcaggccacaagaagttaaaaagcaccatacagaga
agcacagaaacaggaatggcagccgaaatgaggaagatggtaaggcaaccaagtcgagag
tctactgacggcagcatcaacagttatagctccgagggaaacttaatatttcctggagta
cgactaggagcagacagtcaattcagtgattttcttgatggactgggaccagctcagctt
gttggccgccaaacccttgctacccctgcaatgggtgacatacaaattggaatggaggat
aaaaagggccaattagaagttgaagttattagagcacgaagcctcacacaaaaacctggt
tccaagtctacacctgctccttatgtcaaagtgtatcttttggaaaacggggcctgtata
gccaagaagaagacaagaattgcgcgaaaaacccttgatcctttgtatcaacagtccctg
gtttttgacgaaagtccacagggtaaagttcttcaggtcattgtctggggggactatggc
agaatggaccataaatgctttatgggtgtggctcaaatcttgttggaagaactcgatcta
tccagtatggtaatcggatggtacaagttgttcccaccatcatccctggtggaccccaca
ctcactcccctaacgcgccgggcttcccagtcatctctggaaagttcaactgggcctccc
tgcatccgctcatag
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