Leopardus geoffroyi (Geoffroy's cat): 123608893
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Entry
123608893 CDS
T10761
Symbol
COL10A1
Name
(RefSeq) collagen alpha-1(X) chain
KO
K19479
collagen type X alpha
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
123608893 (COL10A1)
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Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
123608893
NCBI-ProteinID:
XP_045355295
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Position
B2:complement(104712009..104757004)
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AA seq
674 aa
AA seq
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MLPQTALLLLLSLNLVHGGFYAERYQTPTGIKGPLPNTKTQFFIPYAIKSKGVSVRGEQG
IPGPPGPVGPRGHPGPSGPPGKPGYGSPGPQGEPGLPGPPGPSTTGKPGLPGLPGKPGEK
GLYGPKGDIGPPGLPGPRGPPGPPGIPGPAGITVPGKPGQQGPPGAPGPRGFPGEKGTPG
VPGVHGQKGETGYGTPGRPGERGLPGPQGPMGPPGSPGVGKRGENGLPGQPGIKGDRGFP
GERGPAGPPGPQGPPGERGPEGIGKPGAPGAPGQPGIPGTKGHPGAPGIAGVPGAPGFGK
PGLPGLKGQRGPIGLPGSPGAKGEQGPAGHPGEPGLTGPPGNMGPQGPKGIPGNQGIPGP
KGETGPAGPAGHPGAKGERGSSGLDGKPGYPGEPGTSGLKGNPGLPGPKGDPGVKGPPGL
PGPVGPAGAKGVPGHNGEAGPRGAPGIPGTRGPIGPPGIPGFPGSKGDPGTPGPPGPAGI
TTKGLNGPTGPPGPPGPRGHTGEPGLPGPPGPPGPPGQAAPSDGFIKAGQRPLVSANQGV
TGMPVSAFTVILSKAYPAIGIPIPFDKILYNRQQHYDSRTGIFTCRIPGTYYFSYHVHVK
GNHVWVGLYKNGTPVMYTYDEYTKGYLDQASGSAILDLTENDQVWLQLPNAGSNGLYSSE
YVHSSFSGFLVAPM
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgctgccacaaacagcccttttgctgctactgtccttgaacctggttcatggaggattt
tatgctgagcgataccaaacacctacaggcataaaaggcccactacccaacactaagaca
cagttcttcattccctatgccataaagagtaaaggtgtatcagtaagaggagagcaaggt
atccctggtcccccaggccctgtgggacctcgagggcacccaggtccatctggaccacca
ggaaaaccaggctatggaagtcctggaccccaaggagagccaggattaccaggaccacca
ggaccatccaccactggaaagccaggtttgccaggactcccaggaaaacccggggagaaa
ggactatatggacccaaaggagatattggaccaccaggtttaccaggaccacggggccca
ccagggccacctggaatccccggcccagctggaattactgttccaggaaaacccggacaa
caaggacctccaggagccccaggacccagaggctttcctggagaaaagggcacaccagga
gtccctggtgtgcatggacagaaaggggaaacaggatatggtactcctggacgcccaggt
gagaggggccttccaggccctcagggtcccatgggaccacctggctctcctggagtagga
aaaagaggtgaaaacgggcttccagggcagccaggcatcaaaggtgatcggggctttcca
ggagagagaggaccagctggcccgccaggcccccaaggtcctcctggggaacgaggacca
gaaggcattggaaagccaggagcccctggagccccaggccagccagggattcctgggaca
aaaggtcaccctggggccccaggaatagctggggtccccggggctcctggctttgggaaa
ccagggttaccaggcctgaagggacaaagaggacctattggccttccagggagtccaggt
gccaaaggggaacaaggcccagcaggccatcctggggaaccaggtctgactggacccccc
ggaaacatgggaccccaaggaccaaaaggcatcccaggcaaccaaggaattccaggccct
aaaggtgagacaggaccggctgggcctgcaggacaccctggggctaagggagaaaggggt
tcctctgggttagatggaaaaccagggtacccgggagaaccaggcaccagtggtcttaag
ggaaatccagggctcccaggcccaaaaggtgaccctggagttaaaggacctcctggtctc
ccaggtcctgtgggcccagcaggagctaagggagtacctggacacaatggtgaggctggt
ccaaggggtgcccctggaataccaggtaccagaggccccattgggccaccaggcattcca
ggattccctggatctaaaggggatccaggaactccaggtcctcctggcccagctggcatt
acaactaaggggcttaatggtcccactgggccaccagggcctccaggtccgagaggccac
actggagagcctggcctccccggtcccccaggccctccaggccccccaggccaggcagcc
ccatccgatggctttataaaggcaggccaaaggcctcttgttagtgccaaccagggagta
acggggatgcctgtgtctgcgttcactgttattctctccaaagcttacccagctataggt
attcccatcccatttgataagattctgtataacaggcaacagcattatgactcaagaact
ggaatctttacctgtaggatcccaggaacatactatttctcctaccacgtgcatgtgaaa
gggaaccatgtttgggtgggcctgtataagaacggcacccctgtcatgtacacctatgat
gaatacaccaaaggctacctggatcaggcttccgggagtgccatactcgatctcacagaa
aatgaccaggtgtggctccagctgcccaatgctgggtcaaatgggctgtactcctctgag
tatgtccactcctccttctcagggttcttggtggcaccaatgtga
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