KEGG   Leopardus geoffroyi (Geoffroy's cat): 123609335
Entry
123609335         CDS       T10761                                 
Name
(RefSeq) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
lgf  Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03022  Basal transcription factors
lgf05016  Huntington disease
lgf05017  Spinocerebellar ataxia
lgf05165  Human papillomavirus infection
lgf05166  Human T-cell leukemia virus 1 infection
lgf05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:lgf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    123609335
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    123609335
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    123609335
   05165 Human papillomavirus infection
    123609335
  09164 Neurodegenerative disease
   05016 Huntington disease
    123609335
   05017 Spinocerebellar ataxia
    123609335
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lgf03000]
    123609335
   03021 Transcription machinery [BR:lgf03021]
    123609335
Transcription factors [BR:lgf03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    123609335
Transcription machinery [BR:lgf03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     123609335
  RNA polymerase III system
    TFIIIB
     123609335
  RNA polymerase I system
    SL1/TIF-1B
     123609335
SSDB
Motif
Pfam: TBP DDHD EPL1 TFIIA DUF7518 STAC2_u1 VPS13_N Tra1_central DUF1501 EMC3_TMCO1 SOG2 PAT1 Hid1 CLN3 SpoIIP DUF4407
Other DBs
NCBI-GeneID: 123609335
NCBI-ProteinID: XP_045356335
LinkDB
Position
B2:152502975..152526353
AA seq 327 aa
MDQNNSLPPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPIQSTNSLSILEEQQRQQQ
QQQQQQQAQQQQQQQQQAQQQQQQQAVAAVQQSASQQATQAASGQTPQLFHSQTLTTAPL
PGTTPLYPSPMTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEY
NPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLD
FKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVL
TGAKVRAEIYEAFENIYPILKGFRKTT
NT seq 984 nt   +upstreamnt  +downstreamnt
atggatcagaacaacagcctgccaccttatgctcagggcctggcctcccctcagggtgcc
atgactcctggaatccccatcttcagtccgatgatgccttatggcacaggactgactcca
cagcctattcagagcaccaacagtctgtccatcttggaggagcagcagaggcagcagcag
cagcagcaacagcagcaacaggcgcagcagcagcagcagcagcagcagcaggcgcagcag
cagcagcagcagcaggcagtggcggccgttcagcagtcagcatcccagcaggcgacgcag
gcggcctcgggccagacgccacagctcttccactcacagactcttaccactgcacccttg
ccgggcaccactcccctgtatccctcccccatgacccccatgacccccatcacccctgcc
acgccagcctctgagagctctgggatcgtgccgcagctgcaaaatattgtatctacggtg
aatcttggctgtaagcttgacctaaagaccattgcacttcgtgcccgaaatgctgaatat
aatccgaagcggtttgctgctgttatcatgagaataagagagccccgaaccactgcacta
atattcagttctgggaaaatggtgtgcacaggagccaagagtgaagagcagtcccgacta
gcagcaagaaaatatgccagagttgtacagaaattaggttttccagcaaagttcttggac
ttcaagattcagaatatggtggggagctgtgatgtgaaattccctataaggttagaaggc
ctcgtgctgacccaccaacaatttagtagttacgagccagagttatttcctggtttaatc
tacagaatgatcaaacccagaattgttcttcttatttttgtttctggaaaagttgtttta
acaggtgctaaagtcagagccgaaatttatgaagcatttgaaaatatctaccctattcta
aagggtttcaggaagacgacataa

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