Leopardus geoffroyi (Geoffroy's cat): 123609335
Help
Entry
123609335 CDS
T10761
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf03022
Basal transcription factors
lgf05016
Huntington disease
lgf05017
Spinocerebellar ataxia
lgf05165
Human papillomavirus infection
lgf05166
Human T-cell leukemia virus 1 infection
lgf05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123609335
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
123609335
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
123609335
05165 Human papillomavirus infection
123609335
09164 Neurodegenerative disease
05016 Huntington disease
123609335
05017 Spinocerebellar ataxia
123609335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lgf03000
]
123609335
03021 Transcription machinery [BR:
lgf03021
]
123609335
Transcription factors [BR:
lgf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
123609335
Transcription machinery [BR:
lgf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123609335
RNA polymerase III system
TFIIIB
123609335
RNA polymerase I system
SL1/TIF-1B
123609335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DDHD
EPL1
TFIIA
DUF7518
STAC2_u1
VPS13_N
Tra1_central
DUF1501
EMC3_TMCO1
SOG2
PAT1
Hid1
CLN3
SpoIIP
DUF4407
Motif
Other DBs
NCBI-GeneID:
123609335
NCBI-ProteinID:
XP_045356335
LinkDB
All DBs
Position
B2:152502975..152526353
Genome browser
AA seq
327 aa
AA seq
DB search
MDQNNSLPPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPIQSTNSLSILEEQQRQQQ
QQQQQQQAQQQQQQQQQAQQQQQQQAVAAVQQSASQQATQAASGQTPQLFHSQTLTTAPL
PGTTPLYPSPMTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEY
NPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLD
FKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVL
TGAKVRAEIYEAFENIYPILKGFRKTT
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggatcagaacaacagcctgccaccttatgctcagggcctggcctcccctcagggtgcc
atgactcctggaatccccatcttcagtccgatgatgccttatggcacaggactgactcca
cagcctattcagagcaccaacagtctgtccatcttggaggagcagcagaggcagcagcag
cagcagcaacagcagcaacaggcgcagcagcagcagcagcagcagcagcaggcgcagcag
cagcagcagcagcaggcagtggcggccgttcagcagtcagcatcccagcaggcgacgcag
gcggcctcgggccagacgccacagctcttccactcacagactcttaccactgcacccttg
ccgggcaccactcccctgtatccctcccccatgacccccatgacccccatcacccctgcc
acgccagcctctgagagctctgggatcgtgccgcagctgcaaaatattgtatctacggtg
aatcttggctgtaagcttgacctaaagaccattgcacttcgtgcccgaaatgctgaatat
aatccgaagcggtttgctgctgttatcatgagaataagagagccccgaaccactgcacta
atattcagttctgggaaaatggtgtgcacaggagccaagagtgaagagcagtcccgacta
gcagcaagaaaatatgccagagttgtacagaaattaggttttccagcaaagttcttggac
ttcaagattcagaatatggtggggagctgtgatgtgaaattccctataaggttagaaggc
ctcgtgctgacccaccaacaatttagtagttacgagccagagttatttcctggtttaatc
tacagaatgatcaaacccagaattgttcttcttatttttgtttctggaaaagttgtttta
acaggtgctaaagtcagagccgaaatttatgaagcatttgaaaatatctaccctattcta
aagggtttcaggaagacgacataa
DBGET
integrated database retrieval system