Leopardus geoffroyi (Geoffroy's cat): 123609575
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Entry
123609575 CDS
T10761
Symbol
VARS2
Name
(RefSeq) valine--tRNA ligase, mitochondrial isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
123609575 (VARS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lgf01007
]
123609575 (VARS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lgf03016
]
123609575 (VARS2)
Enzymes [BR:
lgf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
123609575 (VARS2)
Amino acid related enzymes [BR:
lgf01007
]
Aminoacyl-tRNA synthetase
Class I (U)
123609575 (VARS2)
Transfer RNA biogenesis [BR:
lgf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
123609575 (VARS2)
Prokaryotic type
123609575 (VARS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
tRNA-synt_1f
Motif
Other DBs
NCBI-GeneID:
123609575
NCBI-ProteinID:
XP_045356615
LinkDB
All DBs
Position
B2:29652117..29663606
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AA seq
1001 aa
AA seq
DB search
MPHMPLASFRSPLWGLRPSQVFPRSYPLSTQSKPHGSSLSRRNHEAKKKRQREKQAALEA
GVARKSKTRLPQATGETFSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMCGDQVLWVP
GSDHAGIATQAVVEKQLWKEQGVRRHELSREDFLREVWKWKEEKGGEICEQLQALGASLD
WDRECFTMDAGSSVAVTEAFVRLYEAGLLYRNQQLVNWSCALRSAISDIEVESRPLPGRT
ELRLPGCPIPVSFGLLVSVAFRVDGEPDTEIVVGTTRPETLPGDVAVAVHPDDSRYTHLH
GRQLRHPLTGQLLPLITDSAVQPHMGTGAVKVTPAHSLADAELGARHGLSPLSVIAEDGT
MTSLCGDWLQGLHRFVAREKIMSALRERGLFRGLQNHPMVLPICSRSGDVVEYLLKSQWF
VRCREMGDRAAQAVESGALELSPSFHQKNWQHWFSHIGDWCISRQLWWGHQIPAYLVVQE
QTKDDREDCWVVGRTEAEARKIASELTGRPAAELILQRDPDVLDTWFSSALFPFAALGWP
QETPDLTRFYPLSLLETGSDLLFFWVGRMVMLGTQLTGQLPFSKVLLHSMVRDRQGRKMS
KSLGNVLDPRDIISGVELQVLQEKLRDGNLDSTELAIAAAAQRKDFPHGIPECGTDALRF
TLCSHGALGGDLHLSVSEVLSSRHFCNKIWNALRFILNALGEKFVPQPAEELSPSSPMDA
WILSRLAHTARECGRGFLAQELSLVTHALHHFWLHNLCDVYLEAVKPVLLHSPRPQGPPQ
VLFSCADIGLRLLAPLMPFLAEELWQRLPPRPGGSSAPSISVAPYPTACSLEHWHQPELE
QRFSRVQEAVQALRALRATYQLTKARPRVLLQSSEPEEQGLFEAFLEPLGTLGHCGAVGF
LPPGVLAPSGWAQAPLNDTIQVYMELQGLVDPQTHLSLLAARRHKLQKQLDGLMAWTPSE
GETETKRQQRLSSLELELSKLDKAASHLRQLMDACPSPREL
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatatgcctctggcttcttttcgatcaccactctgggggctgaggccgtcacag
gtcttccccaggtcgtatcccctctctacccagtcaaagccccatggatcctccctctcc
cggagaaaccatgaagccaagaagaagcgccagcgagaaaagcaggcggcgctggaggct
ggggtagcccggaagagcaagaccaggctgccccaggccacaggggagacgttttccatg
tgtatcccacctcccaatgtcactggctccctacatattggacatgcactgacagtggcc
atacaggatgccctggtgcgctggcaccggatgtgtggggatcaggtgctgtgggtccca
ggctcagatcatgcgggaattgctacacaagctgtggtggagaagcaactttggaaggag
caaggagtgaggagacatgagctgagccgggaagacttccttagggaggtgtggaagtgg
aaggaggagaaaggtggagagatctgtgagcagctccaagctctgggggcctcactggac
tgggaccgagagtgtttcactatggatgctggctcctcagtggccgtgactgaagctttt
gtgcgactctatgaggcagggttgttgtatcggaaccagcagcttgtcaactggtcctgt
gctttaagatcagccatctcggatatcgaggtggagagccggcccctgcctggccgcacg
gaacttcgtctgcctggctgccccatccctgtgtcttttggcctccttgtttctgtggcc
ttccgtgtggatggagagcctgacacagagattgtagtaggaaccacaaggccagagaca
ttgcctggagacgtggctgtggctgttcatcctgatgactcccgatacacacatctgcat
gggcgacagcttcgtcaccccttgactgggcagcttctccccctcatcacagactctgct
gttcagccacacatgggcacaggggcggtgaaggtgactccagcacatagtcttgctgat
gctgagctgggagcccgacatggcttgagccctctgagtgtcattgcagaggatgggacc
atgacttccctctgtggggattggctacagggtcttcaccgatttgtggcccgggaaaag
attatgtctgcactgagggagcggggcctgttccggggccttcagaaccaccctatggtg
cttcctatttgcagccgttctggggacgtggtagaatacctactgaagagccagtggttt
gtccgctgccgggagatgggggatcgagctgcccaggctgtggagtcaggagctctggag
ctcagtccctccttccaccagaaaaactggcagcactggttttcccacattggagactgg
tgtatctcccggcagctgtggtggggccatcagattcccgcctacctggttgtacaggag
caaacgaaggatgacagggaggattgttgggtggttgggaggacagaggccgaggccaga
aaaatagcttcagagctgacagggagaccagcggcagagctgatcctgcagagggaccct
gatgtcctggacacatggttctcttcagctcttttcccctttgctgccctgggctggccc
caagagaccccagacctcactcgtttctaccccctgtcacttttggaaactggtagtgac
cttctgttcttctgggtgggccgcatggtcatgttggggacccagctcacagggcagctc
cccttcagcaaggtgcttcttcattccatggttcgggacaggcagggccggaaaatgagc
aagtccctagggaatgtgttggacccacgagacatcatcagtggggtggagctgcaggtg
ctgcaggaaaagctgagggatgggaacttggactctacagagctggcgatcgcggctgca
gcacagagaaaggacttccctcatgggatccctgagtgtgggacagatgccctaagattc
accttgtgctcccatggggccttagggggcgacttgcacctgtctgtctccgaagtcctg
agttcccggcatttctgcaacaaaatctggaatgccctgcgctttatcctcaatgcctta
ggggagaaatttgtgccccagcctgcagaagagctttccccttcatcgcccatggatgcc
tggatcctgagccgtcttgcccatactgcccgggagtgtgggcgaggcttccttgcccaa
gagctctcacttgtcacccatgccctgcaccacttctggctccataacctctgtgatgtc
tacttggaggctgtgaagccggtgctgttgcactcgccccgtccccaaggcccccctcag
gtcctgttctcctgtgctgacatcggtctccgcctcctcgccccactgatgcccttcctg
gctgaagagctctggcagaggctgccccccaggcctggaggctcctctgcccctagcatc
tctgttgccccctaccccactgcctgcagcttggaacactggcaccagcctgagctggaa
cagcgcttctcccgggtccaagaggccgtgcaggcactgagggctctccgagccacatac
cagctcacaaaggcccggccccgagtgctgttgcagagctcagagcctgaagagcaaggc
ctcttcgaggcctttctggaacctctaggcaccctgggccactgtggggctgtgggcttc
ttacccccaggtgtactggctccctctggctgggcccaggctccactcaatgataccatt
caggtgtacatggagctgcaggggcttgtggacccccagacccatctatctctgctagct
gcccgaagacacaagttgcaaaagcagcttgatggcctcatggcctggaccccatcagag
ggggagacggagactaaaaggcagcagaggctttcttccctcgagttggaattgtcgaag
ctggacaaggcggcctctcacctccggcagctgatggatgcatgtcctagccccagagag
ctctga
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