Leopardus geoffroyi (Geoffroy's cat): 123609596
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Entry
123609596 CDS
T10761
Symbol
LTA
Name
(RefSeq) lymphotoxin-alpha
KO
K05468
lymphotoxin alpha (TNF superfamily, member 1)
Organism
lgf Leopardus geoffroyi (Geoffroy's cat)
Pathway
lgf04060
Cytokine-cytokine receptor interaction
lgf04061
Viral protein interaction with cytokine and cytokine receptor
lgf04064
NF-kappa B signaling pathway
lgf04668
TNF signaling pathway
lgf04940
Type I diabetes mellitus
lgf05166
Human T-cell leukemia virus 1 infection
lgf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lgf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
123609596 (LTA)
04668 TNF signaling pathway
123609596 (LTA)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
123609596 (LTA)
04061 Viral protein interaction with cytokine and cytokine receptor
123609596 (LTA)
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
123609596 (LTA)
05168 Herpes simplex virus 1 infection
123609596 (LTA)
09167 Endocrine and metabolic disease
04940 Type I diabetes mellitus
123609596 (LTA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lgf04052
]
123609596 (LTA)
Cytokines and neuropeptides [BR:
lgf04052
]
Cytokines
Tumor necrosis fators
123609596 (LTA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
123609596
NCBI-ProteinID:
XP_045356686
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Position
B2:30603171..30606650
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AA seq
205 aa
AA seq
DB search
MTPPGRLYLLRVCSAPLLLLLLGLLLALPPEAQGLPGVGISPSAARTTYQHPQKHFAQGT
LKPAAHLIGDPSTQNSLRWRANTDRAFLRHGFSLSNNSLLVPTSGLYFVYSQVVFSGEGC
FPKATPTPLYLAHEVQLFSSQYPFHVPLLSAQKSVCPGPQGPWVRSVYQGAVFLLTQGDQ
LSTHTDGISHLLLSPSSVFFGAFAL
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgacaccacctggaaggctctacctcctgcgggtgtgcagcgcccccctcctcctcctc
cttctggggctgctgctggccctgccgcctgaggcccaggggcttcctggtgttggcatc
tcaccctcagctgcccggactacctatcagcaccctcagaagcacttcgcacaaggcacc
ctcaaacctgctgctcatcttattggagaccccagcacccagaactcactgcgctggaga
gcaaacacagatcgtgccttcctccgccatggcttctccttgagcaacaattccctcctg
gtccccaccagtggcctctactttgtctactctcaggtggtcttctctggggaaggctgc
ttccccaaggccaccccgacccctctctacctggcccatgaggtccagctcttctcctcc
cagtaccccttccacgtgcctctcctcagtgctcagaagtccgtgtgcccagggccacag
ggaccttgggtgcgctctgtgtaccagggagctgtgttcctgctcacccagggagatcag
ctatccactcacacagatggcatctcccacctactcctcagccccagtagtgtcttcttt
ggagcgtttgctctgtag
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